RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
SPC25-203ENST00000472216 IDI1Q13907 227 aa16.47■□□□□ 0.23
SPC25-203ENST00000472216 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
SPC25-203ENST00000472216 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
SPC25-203ENST00000472216 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
SPC25-203ENST00000472216 ZBTB7AO95365 584 aa16.45■□□□□ 0.22
SPC25-203ENST00000472216 MYOM1P52179 1685 aa16.44■□□□□ 0.22
SPC25-203ENST00000472216 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
SPC25-203ENST00000472216 FAM98CQ17RN3 349 aaKnown RBP16.44■□□□□ 0.22
SPC25-203ENST00000472216 AMOTL2Q9Y2J4 779 aa16.44■□□□□ 0.22
SPC25-203ENST00000472216 ATP10DQ9P241 1426 aa16.44■□□□□ 0.22
SPC25-203ENST00000472216 KLRG1Q96E93 195 aa16.43■□□□□ 0.22
SPC25-203ENST00000472216 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
SPC25-203ENST00000472216 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
SPC25-203ENST00000472216 TNS2Q63HR2 1409 aa16.41■□□□□ 0.22
SPC25-203ENST00000472216 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
SPC25-203ENST00000472216 LAMC1P11047 1609 aa16.4■□□□□ 0.22
SPC25-203ENST00000472216 RREB1Q92766 1687 aa16.4■□□□□ 0.22
SPC25-203ENST00000472216 ADGRB3O60242 1522 aa16.4■□□□□ 0.22
SPC25-203ENST00000472216 ARHGAP31Q2M1Z3 1444 aa16.39■□□□□ 0.21
SPC25-203ENST00000472216 MBD5Q9P267 1494 aa16.39■□□□□ 0.21
SPC25-203ENST00000472216 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
SPC25-203ENST00000472216 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
SPC25-203ENST00000472216 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
SPC25-203ENST00000472216 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
SPC25-203ENST00000472216 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
SPC25-203ENST00000472216 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
SPC25-203ENST00000472216 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
SPC25-203ENST00000472216 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
SPC25-203ENST00000472216 PDGFDQ9GZP0 370 aaPredicted RBP16.34■□□□□ 0.21
SPC25-203ENST00000472216 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
SPC25-203ENST00000472216 ARXQ96QS3 562 aa16.33■□□□□ 0.2
SPC25-203ENST00000472216 CCNB3Q8WWL7 1395 aa16.33■□□□□ 0.2
SPC25-203ENST00000472216 TRPM2O94759 1503 aa16.33■□□□□ 0.2
SPC25-203ENST00000472216 TMEM131LA2VDJ0 1609 aa16.32■□□□□ 0.2
SPC25-203ENST00000472216 NOS1P29475 1434 aa16.32■□□□□ 0.2
SPC25-203ENST00000472216 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
SPC25-203ENST00000472216 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
SPC25-203ENST00000472216 NPHP3Q7Z494 1330 aa16.3■□□□□ 0.2
SPC25-203ENST00000472216 MLLT1Q03111 559 aaPredicted RBP16.3■□□□□ 0.2
SPC25-203ENST00000472216 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
SPC25-203ENST00000472216 CEP152O94986 1710 aa16.3■□□□□ 0.2
SPC25-203ENST00000472216 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
SPC25-203ENST00000472216 ZFYVE9O95405 1425 aa16.29■□□□□ 0.2
SPC25-203ENST00000472216 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
SPC25-203ENST00000472216 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
SPC25-203ENST00000472216 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
SPC25-203ENST00000472216 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
SPC25-203ENST00000472216 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
SPC25-203ENST00000472216 LRRIQ1Q96JM4 1722 aa16.28■□□□□ 0.2
SPC25-203ENST00000472216 KIF3CO14782 793 aa16.27■□□□□ 0.2
SPC25-203ENST00000472216 HAP1P54257 671 aaPredicted RBP16.27■□□□□ 0.2
SPC25-203ENST00000472216 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPC25-203ENST00000472216 PTPRUQ92729 1446 aa16.27■□□□□ 0.19
SPC25-203ENST00000472216 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.19
SPC25-203ENST00000472216 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
SPC25-203ENST00000472216 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
SPC25-203ENST00000472216 SLC52A1Q9NWF4 448 aa16.26■□□□□ 0.19
SPC25-203ENST00000472216 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SPC25-203ENST00000472216 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
SPC25-203ENST00000472216 ABCC5O15440 1437 aa16.24■□□□□ 0.19
SPC25-203ENST00000472216 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
SPC25-203ENST00000472216 TOMM70O94826 608 aa16.23■□□□□ 0.19
SPC25-203ENST00000472216 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
SPC25-203ENST00000472216 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
SPC25-203ENST00000472216 HTRA3P83110 453 aa16.22■□□□□ 0.19
SPC25-203ENST00000472216 NWD2Q9ULI1 1742 aa16.22■□□□□ 0.19
SPC25-203ENST00000472216 XPCQ01831 940 aaPredicted RBP16.21■□□□□ 0.19
SPC25-203ENST00000472216 USP32Q8NFA0 1604 aa16.2■□□□□ 0.18
SPC25-203ENST00000472216 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
SPC25-203ENST00000472216 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
SPC25-203ENST00000472216 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
SPC25-203ENST00000472216 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
SPC25-203ENST00000472216 CHGAP10645 457 aaKnown RBP16.18■□□□□ 0.18
SPC25-203ENST00000472216 PXDNQ92626 1479 aa16.17■□□□□ 0.18
SPC25-203ENST00000472216 ADCY9O60503 1353 aa16.17■□□□□ 0.18
SPC25-203ENST00000472216 FOXO3O43524 673 aa16.17■□□□□ 0.18
SPC25-203ENST00000472216 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
SPC25-203ENST00000472216 USP19O94966 1318 aa16.17■□□□□ 0.18
SPC25-203ENST00000472216 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
SPC25-203ENST00000472216 EIF2AK4Q9P2K8 1649 aaKnown RBP16.16■□□□□ 0.18
SPC25-203ENST00000472216 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
SPC25-203ENST00000472216 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
SPC25-203ENST00000472216 ESCO1Q5FWF5 840 aa16.15■□□□□ 0.18
SPC25-203ENST00000472216 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
SPC25-203ENST00000472216 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
SPC25-203ENST00000472216 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.18
SPC25-203ENST00000472216 YBX3P16989 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
SPC25-203ENST00000472216 PLSCR1O15162 318 aa16.13■□□□□ 0.17
SPC25-203ENST00000472216 STK32BQ9NY57 414 aa16.13■□□□□ 0.17
SPC25-203ENST00000472216 RGS19P49795 217 aa16.12■□□□□ 0.17
SPC25-203ENST00000472216 PDE3BQ13370 1112 aa16.12■□□□□ 0.17
SPC25-203ENST00000472216 BTG4Q9NY30 223 aa16.12■□□□□ 0.17
SPC25-203ENST00000472216 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
SPC25-203ENST00000472216 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
SPC25-203ENST00000472216 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
SPC25-203ENST00000472216 XRN1Q8IZH2 1706 aaKnown RBP16.1■□□□□ 0.17
SPC25-203ENST00000472216 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
SPC25-203ENST00000472216 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
SPC25-203ENST00000472216 SLC15A2Q16348 729 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms