RNA–Protein interactions for RNA: ENST00000472161.1

RPS3AP49-201, Transcript of ribosomal protein S3a pseudogene 49, humanhuman

BASIC

Gene RPS3AP49, Length 790 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP49-201ENST00000472161 SLIT1O75093 1534 aa10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 ROCK1Q13464 1354 aa10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 NOS1P29475 1434 aa10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
RPS3AP49-201ENST00000472161 FBXO41Q8TF61 875 aa10.52□□□□□ -0.73
RPS3AP49-201ENST00000472161 ADGRB3O60242 1522 aa10.52□□□□□ -0.73
RPS3AP49-201ENST00000472161 IQSEC2Q5JU85 1478 aa10.51□□□□□ -0.73
RPS3AP49-201ENST00000472161 CERKQ8TCT0 537 aa10.51□□□□□ -0.73
RPS3AP49-201ENST00000472161 ALKQ9UM73 1620 aa10.51□□□□□ -0.73
RPS3AP49-201ENST00000472161 RPRD2Q5VT52 1461 aaKnown RBP10.5□□□□□ -0.73
RPS3AP49-201ENST00000472161 XIRP1Q702N8 1843 aaKnown RBP10.5□□□□□ -0.73
RPS3AP49-201ENST00000472161 ZNF335Q9H4Z2 1342 aaPredicted RBP10.5□□□□□ -0.73
RPS3AP49-201ENST00000472161 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
RPS3AP49-201ENST00000472161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
RPS3AP49-201ENST00000472161 SPHKAPQ2M3C7 1700 aa10.48□□□□□ -0.73
RPS3AP49-201ENST00000472161 PKD2Q13563 968 aa10.48□□□□□ -0.73
RPS3AP49-201ENST00000472161 NPHP4O75161 1426 aaPredicted RBP10.48□□□□□ -0.73
RPS3AP49-201ENST00000472161 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
RPS3AP49-201ENST00000472161 CABP2Q9NPB3 220 aa10.47□□□□□ -0.73
RPS3AP49-201ENST00000472161 KANK1Q14678 1352 aa10.47□□□□□ -0.73
RPS3AP49-201ENST00000472161 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.46□□□□□ -0.73
RPS3AP49-201ENST00000472161 CPS1P31327 1500 aa10.45□□□□□ -0.74
RPS3AP49-201ENST00000472161 NAIPQ13075 1403 aa10.45□□□□□ -0.74
RPS3AP49-201ENST00000472161 ZFYVE9O95405 1425 aa10.44□□□□□ -0.74
RPS3AP49-201ENST00000472161 CLTCL1P53675 1640 aa10.44□□□□□ -0.74
RPS3AP49-201ENST00000472161 NWD1Q149M9 1564 aa10.43□□□□□ -0.74
RPS3AP49-201ENST00000472161 TMEM2Q9UHN6 1383 aa10.43□□□□□ -0.74
RPS3AP49-201ENST00000472161 ST18O60284 1047 aa10.43□□□□□ -0.74
RPS3AP49-201ENST00000472161 HFM1A2PYH4 1435 aa10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 LTKP29376 864 aa10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 THEMISQ8N1K5 641 aaPredicted RBP10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 NRXN3Q9Y4C0 1643 aa10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 LRRC7Q96NW7 1537 aa10.42□□□□□ -0.74
RPS3AP49-201ENST00000472161 ITGAEP38570 1179 aa10.41□□□□□ -0.74
RPS3AP49-201ENST00000472161 IDI1Q13907 227 aa10.41□□□□□ -0.74
RPS3AP49-201ENST00000472161 TRPM2O94759 1503 aa10.41□□□□□ -0.74
RPS3AP49-201ENST00000472161 C3orf67Q6ZVT6 689 aa10.4□□□□□ -0.74
RPS3AP49-201ENST00000472161 ANKLE2Q86XL3 938 aa10.4□□□□□ -0.74
RPS3AP49-201ENST00000472161 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
RPS3AP49-201ENST00000472161 PCDH10Q9P2E7 1040 aa10.4□□□□□ -0.74
RPS3AP49-201ENST00000472161 CHD2O14647 1828 aaKnown RBP10.39□□□□□ -0.75
RPS3AP49-201ENST00000472161 NUP155O75694 1391 aa10.38□□□□□ -0.75
RPS3AP49-201ENST00000472161 SETD1AO15047 1707 aaKnown RBP10.37□□□□□ -0.75
RPS3AP49-201ENST00000472161 NEXMIFQ5QGS0 1516 aa10.37□□□□□ -0.75
RPS3AP49-201ENST00000472161 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
RPS3AP49-201ENST00000472161 XRN1Q8IZH2 1706 aaKnown RBP10.36□□□□□ -0.75
RPS3AP49-201ENST00000472161 DIP2AQ14689 1571 aa10.35□□□□□ -0.75
RPS3AP49-201ENST00000472161 RIMS2Q9UQ26 1411 aa10.35□□□□□ -0.75
RPS3AP49-201ENST00000472161 RIOK3O14730 519 aaKnown RBP10.35□□□□□ -0.75
RPS3AP49-201ENST00000472161 KIF1BO60333 1816 aa10.35□□□□□ -0.75
RPS3AP49-201ENST00000472161 SETBP1Q9Y6X0 1596 aa10.35□□□□□ -0.75
RPS3AP49-201ENST00000472161 ADAMTS13Q76LX8 1427 aa10.34□□□□□ -0.75
RPS3AP49-201ENST00000472161 IFT172Q9UG01 1749 aa10.34□□□□□ -0.75
RPS3AP49-201ENST00000472161 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
RPS3AP49-201ENST00000472161 SLC52A1Q9NWF4 448 aa10.34□□□□□ -0.75
RPS3AP49-201ENST00000472161 PLEKHG1Q9ULL1 1385 aa10.34□□□□□ -0.75
RPS3AP49-201ENST00000472161 NKTRP30414 1462 aaKnown RBP10.34□□□□□ -0.75
RPS3AP49-201ENST00000472161 SNPHO15079 494 aa10.33□□□□□ -0.76
RPS3AP49-201ENST00000472161 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
RPS3AP49-201ENST00000472161 PPLO60437 1756 aa10.33□□□□□ -0.76
RPS3AP49-201ENST00000472161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.32□□□□□ -0.76
RPS3AP49-201ENST00000472161 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
RPS3AP49-201ENST00000472161 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
RPS3AP49-201ENST00000472161 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
RPS3AP49-201ENST00000472161 UBAP1LF5GYI3 381 aa10.29□□□□□ -0.76
RPS3AP49-201ENST00000472161 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
RPS3AP49-201ENST00000472161 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
RPS3AP49-201ENST00000472161 EID1Q9Y6B2 187 aa10.29□□□□□ -0.76
RPS3AP49-201ENST00000472161 PTPRUQ92729 1446 aa10.29□□□□□ -0.76
RPS3AP49-201ENST00000472161 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
RPS3AP49-201ENST00000472161 NALCNQ8IZF0 1738 aa10.28□□□□□ -0.76
RPS3AP49-201ENST00000472161 G3V3G9 751 aa10.28□□□□□ -0.76
RPS3AP49-201ENST00000472161 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
RPS3AP49-201ENST00000472161 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
RPS3AP49-201ENST00000472161 TMEM94Q12767 1356 aa10.27□□□□□ -0.76
RPS3AP49-201ENST00000472161 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.27□□□□□ -0.76
RPS3AP49-201ENST00000472161 MED1Q15648 1581 aaPredicted RBP10.27□□□□□ -0.76
RPS3AP49-201ENST00000472161 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
RPS3AP49-201ENST00000472161 ASXL1Q8IXJ9 1541 aa10.25□□□□□ -0.77
RPS3AP49-201ENST00000472161 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
RPS3AP49-201ENST00000472161 KCNA6P17658 529 aa10.24□□□□□ -0.77
RPS3AP49-201ENST00000472161 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
RPS3AP49-201ENST00000472161 HSPA1LP34931 641 aa10.23□□□□□ -0.77
RPS3AP49-201ENST00000472161 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
RPS3AP49-201ENST00000472161 METP08581 1390 aa10.23□□□□□ -0.77
RPS3AP49-201ENST00000472161 PRAG1Q86YV5 1406 aa10.23□□□□□ -0.77
RPS3AP49-201ENST00000472161 COL16A1Q07092 1604 aaPredicted RBP10.22□□□□□ -0.77
RPS3AP49-201ENST00000472161 SOX12O15370 315 aa10.22□□□□□ -0.77
RPS3AP49-201ENST00000472161 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
RPS3AP49-201ENST00000472161 PIP4K2BP78356 416 aa10.22□□□□□ -0.77
RPS3AP49-201ENST00000472161 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
RPS3AP49-201ENST00000472161 TBX22Q9Y458 520 aa10.22□□□□□ -0.77
RPS3AP49-201ENST00000472161 PIK3R4Q99570 1358 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms