RNA–Protein interactions for RNA: ENST00000471917.1

LPP-213, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-213ENST00000471917 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
LPP-213ENST00000471917 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.05□□□□□ -0.32
LPP-213ENST00000471917 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
LPP-213ENST00000471917 C19orf44Q9H6X5 657 aa13.04□□□□□ -0.32
LPP-213ENST00000471917 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
LPP-213ENST00000471917 SRCAPQ6ZRS2 3230 aa13.03□□□□□ -0.32
LPP-213ENST00000471917 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
LPP-213ENST00000471917 RGS12O14924 1447 aa13.03□□□□□ -0.32
LPP-213ENST00000471917 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.32
LPP-213ENST00000471917 HDGFP51858 240 aaKnown RBP13.02□□□□□ -0.33
LPP-213ENST00000471917 CDC42BPGQ6DT37 1551 aa13.02□□□□□ -0.33
LPP-213ENST00000471917 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.33
LPP-213ENST00000471917 METP08581 1390 aa13.01□□□□□ -0.33
LPP-213ENST00000471917 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
LPP-213ENST00000471917 PNPLA6Q8IY17 1366 aa13□□□□□ -0.33
LPP-213ENST00000471917 ZNF772Q68DY9 489 aaPredicted RBP13□□□□□ -0.33
LPP-213ENST00000471917 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
LPP-213ENST00000471917 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
LPP-213ENST00000471917 ROCK2O75116 1388 aaKnown RBP12.98□□□□□ -0.33
LPP-213ENST00000471917 USP47Q96K76 1375 aa12.98□□□□□ -0.33
LPP-213ENST00000471917 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
LPP-213ENST00000471917 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
LPP-213ENST00000471917 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
LPP-213ENST00000471917 C11orf95C9JLR9 678 aaPredicted RBP12.97□□□□□ -0.33
LPP-213ENST00000471917 ATF3P18847 181 aa12.97□□□□□ -0.33
LPP-213ENST00000471917 NUTM2DQ5VT03 806 aaPredicted RBP12.97□□□□□ -0.33
LPP-213ENST00000471917 BCANQ96GW7 911 aa12.97□□□□□ -0.33
LPP-213ENST00000471917 CCDC144AA2RUR9 1427 aa12.96□□□□□ -0.33
LPP-213ENST00000471917 ABCA3Q99758 1704 aa12.96□□□□□ -0.33
LPP-213ENST00000471917 NEFLP07196 543 aa12.96□□□□□ -0.33
LPP-213ENST00000471917 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
LPP-213ENST00000471917 PRKRIP1Q9H875 184 aaPredicted RBP12.95□□□□□ -0.34
LPP-213ENST00000471917 MYOM2P54296 1465 aa12.95□□□□□ -0.34
LPP-213ENST00000471917 AFF2P51816 1311 aa12.94□□□□□ -0.34
LPP-213ENST00000471917 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
LPP-213ENST00000471917 CARD11Q9BXL7 1154 aa12.94□□□□□ -0.34
LPP-213ENST00000471917 PXDNQ92626 1479 aa12.93□□□□□ -0.34
LPP-213ENST00000471917 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
LPP-213ENST00000471917 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
LPP-213ENST00000471917 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
LPP-213ENST00000471917 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
LPP-213ENST00000471917 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
LPP-213ENST00000471917 BRWD3Q6RI45 1802 aa12.92□□□□□ -0.34
LPP-213ENST00000471917 ROBO2Q9HCK4 1378 aa12.92□□□□□ -0.34
LPP-213ENST00000471917 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
LPP-213ENST00000471917 TECPR2O15040 1411 aa12.9□□□□□ -0.34
LPP-213ENST00000471917 ATRNO75882 1429 aa12.9□□□□□ -0.34
LPP-213ENST00000471917 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
LPP-213ENST00000471917 RXRBP28702 533 aa12.9□□□□□ -0.34
LPP-213ENST00000471917 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
LPP-213ENST00000471917 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
LPP-213ENST00000471917 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
LPP-213ENST00000471917 PLCH1Q4KWH8 1693 aa12.89□□□□□ -0.35
LPP-213ENST00000471917 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
LPP-213ENST00000471917 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
LPP-213ENST00000471917 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
LPP-213ENST00000471917 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
LPP-213ENST00000471917 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
LPP-213ENST00000471917 GLI3P10071 1580 aa12.88□□□□□ -0.35
LPP-213ENST00000471917 GPRASP1Q5JY77 1395 aa12.87□□□□□ -0.35
LPP-213ENST00000471917 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
LPP-213ENST00000471917 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
LPP-213ENST00000471917 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
LPP-213ENST00000471917 TRPM1Q7Z4N2 1603 aa12.85□□□□□ -0.35
LPP-213ENST00000471917 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
LPP-213ENST00000471917 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
LPP-213ENST00000471917 FKBP8Q14318 412 aa12.85□□□□□ -0.35
LPP-213ENST00000471917 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
LPP-213ENST00000471917 NRAPQ86VF7 1730 aa12.85□□□□□ -0.35
LPP-213ENST00000471917 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
LPP-213ENST00000471917 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
LPP-213ENST00000471917 ATAD2Q6PL18 1390 aa12.83□□□□□ -0.36
LPP-213ENST00000471917 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
LPP-213ENST00000471917 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
LPP-213ENST00000471917 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
LPP-213ENST00000471917 LRP5O75197 1615 aa12.83□□□□□ -0.36
LPP-213ENST00000471917 SLIT2O94813 1529 aa12.83□□□□□ -0.36
LPP-213ENST00000471917 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
LPP-213ENST00000471917 ADGRB2O60241 1585 aa12.82□□□□□ -0.36
LPP-213ENST00000471917 RALBP1Q15311 655 aa12.82□□□□□ -0.36
LPP-213ENST00000471917 RGL3Q3MIN7 710 aa12.82□□□□□ -0.36
LPP-213ENST00000471917 FNBP4Q8N3X1 1017 aaPredicted RBP12.82□□□□□ -0.36
LPP-213ENST00000471917 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
LPP-213ENST00000471917 PIK3C2GO75747 1445 aa12.81□□□□□ -0.36
LPP-213ENST00000471917 FAM9BQ8IZU0 186 aa12.81□□□□□ -0.36
LPP-213ENST00000471917 NRXN1Q9ULB1 1477 aa12.8□□□□□ -0.36
LPP-213ENST00000471917 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
LPP-213ENST00000471917 QTRT2Q9H974 415 aaKnown RBP12.8□□□□□ -0.36
LPP-213ENST00000471917 RPGRIP1LQ68CZ1 1315 aa12.8□□□□□ -0.36
LPP-213ENST00000471917 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
LPP-213ENST00000471917 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
LPP-213ENST00000471917 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
LPP-213ENST00000471917 TMF1P82094 1093 aa12.77□□□□□ -0.37
LPP-213ENST00000471917 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.37
LPP-213ENST00000471917 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.37
LPP-213ENST00000471917 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
LPP-213ENST00000471917 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
LPP-213ENST00000471917 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
LPP-213ENST00000471917 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
LPP-213ENST00000471917 TRPC5Q9UL62 973 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms