RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
APLF-204ENST00000471727 E9PSI1 815 aa13.95□□□□□ -0.18
APLF-204ENST00000471727 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
APLF-204ENST00000471727 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
APLF-204ENST00000471727 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
APLF-204ENST00000471727 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
APLF-204ENST00000471727 CFAP65Q6ZU64 1925 aaKnown RBP13.94□□□□□ -0.18
APLF-204ENST00000471727 TMEM131LA2VDJ0 1609 aa13.94□□□□□ -0.18
APLF-204ENST00000471727 RIMBP3CA6NJZ7 1639 aa13.94□□□□□ -0.18
APLF-204ENST00000471727 RIMBP3BA6NNM3 1639 aa13.94□□□□□ -0.18
APLF-204ENST00000471727 RIMBP3Q9UFD9 1639 aa13.94□□□□□ -0.18
APLF-204ENST00000471727 ATAD2Q6PL18 1390 aa13.93□□□□□ -0.18
APLF-204ENST00000471727 APAF1O14727 1248 aa13.92□□□□□ -0.18
APLF-204ENST00000471727 MS4A1P11836 297 aa13.92□□□□□ -0.18
APLF-204ENST00000471727 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
APLF-204ENST00000471727 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
APLF-204ENST00000471727 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
APLF-204ENST00000471727 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
APLF-204ENST00000471727 TERF2IPQ9NYB0 399 aa13.9□□□□□ -0.19
APLF-204ENST00000471727 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.19
APLF-204ENST00000471727 YTHDC2Q9H6S0 1430 aaKnown RBP13.89□□□□□ -0.19
APLF-204ENST00000471727 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
APLF-204ENST00000471727 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
APLF-204ENST00000471727 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
APLF-204ENST00000471727 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
APLF-204ENST00000471727 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
APLF-204ENST00000471727 POGKQ9P215 609 aa13.88□□□□□ -0.19
APLF-204ENST00000471727 ABCC11Q96J66 1382 aa13.87□□□□□ -0.19
APLF-204ENST00000471727 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
APLF-204ENST00000471727 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
APLF-204ENST00000471727 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
APLF-204ENST00000471727 MED14O60244 1454 aa13.87□□□□□ -0.19
APLF-204ENST00000471727 PTPRMP28827 1452 aa13.87□□□□□ -0.19
APLF-204ENST00000471727 SPATA31D1Q6ZQQ2 1576 aa13.87□□□□□ -0.19
APLF-204ENST00000471727 PLIN1O60240 522 aa13.86□□□□□ -0.19
APLF-204ENST00000471727 MTHFSP49914 203 aa13.86□□□□□ -0.19
APLF-204ENST00000471727 DLC1Q96QB1 1528 aa13.86□□□□□ -0.19
APLF-204ENST00000471727 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
APLF-204ENST00000471727 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
APLF-204ENST00000471727 FBXO31Q5XUX0 539 aaPredicted RBP13.86□□□□□ -0.19
APLF-204ENST00000471727 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
APLF-204ENST00000471727 CABP2Q9NPB3 220 aa13.86□□□□□ -0.19
APLF-204ENST00000471727 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
APLF-204ENST00000471727 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
APLF-204ENST00000471727 STK26Q9P289 416 aa13.85□□□□□ -0.19
APLF-204ENST00000471727 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
APLF-204ENST00000471727 AAMPQ13685 434 aa13.84□□□□□ -0.19
APLF-204ENST00000471727 CENPQQ7L2Z9 268 aaPredicted RBP13.84□□□□□ -0.19
APLF-204ENST00000471727 PRAM1Q96QH2 718 aa13.84□□□□□ -0.19
APLF-204ENST00000471727 CLTCQ00610 1675 aaKnown RBP13.84□□□□□ -0.19
APLF-204ENST00000471727 PDE3AQ14432 1141 aa13.83□□□□□ -0.2
APLF-204ENST00000471727 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
APLF-204ENST00000471727 PIAS4Q8N2W9 510 aaPredicted RBP13.82□□□□□ -0.2
APLF-204ENST00000471727 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
APLF-204ENST00000471727 PNNQ9H307 717 aaKnown RBP13.82□□□□□ -0.2
APLF-204ENST00000471727 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
APLF-204ENST00000471727 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
APLF-204ENST00000471727 RIMS2Q9UQ26 1411 aa13.82□□□□□ -0.2
APLF-204ENST00000471727 SHPRHQ149N8 1683 aa13.81□□□□□ -0.2
APLF-204ENST00000471727 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
APLF-204ENST00000471727 IQSEC2Q5JU85 1478 aa13.81□□□□□ -0.2
APLF-204ENST00000471727 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
APLF-204ENST00000471727 MYO5BQ9ULV0 1848 aa13.8□□□□□ -0.2
APLF-204ENST00000471727 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
APLF-204ENST00000471727 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
APLF-204ENST00000471727 CDK19Q9BWU1 502 aa13.8□□□□□ -0.2
APLF-204ENST00000471727 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
APLF-204ENST00000471727 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
APLF-204ENST00000471727 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
APLF-204ENST00000471727 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
APLF-204ENST00000471727 MYH16Q9H6N6 1097 aa13.79□□□□□ -0.2
APLF-204ENST00000471727 C20orf194Q5TEA3 1177 aa13.79□□□□□ -0.2
APLF-204ENST00000471727 FYB1O15117 783 aa13.78□□□□□ -0.2
APLF-204ENST00000471727 PDE4AP27815 886 aa13.78□□□□□ -0.2
APLF-204ENST00000471727 IPO9Q96P70 1041 aaKnown RBP13.78□□□□□ -0.2
APLF-204ENST00000471727 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
APLF-204ENST00000471727 ATP7BP35670 1465 aa13.77□□□□□ -0.2
APLF-204ENST00000471727 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.21
APLF-204ENST00000471727 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.21
APLF-204ENST00000471727 TSPOAP1O95153 1857 aa13.77□□□□□ -0.21
APLF-204ENST00000471727 ZMYM3Q14202 1370 aa13.77□□□□□ -0.21
APLF-204ENST00000471727 NOP58Q9Y2X3 529 aaKnown RBP13.76□□□□□ -0.21
APLF-204ENST00000471727 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
APLF-204ENST00000471727 PNPLA6Q8IY17 1366 aa13.75□□□□□ -0.21
APLF-204ENST00000471727 IL16Q14005 1332 aa13.75□□□□□ -0.21
APLF-204ENST00000471727 BCAR3O75815 825 aa13.75□□□□□ -0.21
APLF-204ENST00000471727 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
APLF-204ENST00000471727 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
APLF-204ENST00000471727 NLRP1Q9C000 1473 aa13.74□□□□□ -0.21
APLF-204ENST00000471727 ADGRB2O60241 1585 aa13.74□□□□□ -0.21
APLF-204ENST00000471727 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
APLF-204ENST00000471727 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
APLF-204ENST00000471727 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
APLF-204ENST00000471727 DIAPH1O60610 1272 aaKnown RBP13.73□□□□□ -0.21
APLF-204ENST00000471727 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
APLF-204ENST00000471727 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
APLF-204ENST00000471727 COL3A1P02461 1466 aaPredicted RBP13.73□□□□□ -0.21
APLF-204ENST00000471727 MAPK8IP3Q9UPT6 1336 aa13.73□□□□□ -0.21
APLF-204ENST00000471727 TECPR2O15040 1411 aa13.72□□□□□ -0.21
APLF-204ENST00000471727 MLECQ14165 292 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms