RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 SREK1Q8WXA9 508 aaKnown RBP9.28□□□□□ -0.92
NF1-208ENST00000471572 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
NF1-208ENST00000471572 C8orf37Q96NL8 207 aa9.28□□□□□ -0.92
NF1-208ENST00000471572 EYA1Q99502 592 aa9.28□□□□□ -0.92
NF1-208ENST00000471572 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.92
NF1-208ENST00000471572 NPAS4Q8IUM7 802 aa9.27□□□□□ -0.92
NF1-208ENST00000471572 ATN1P54259 1190 aaPredicted RBP9.27□□□□□ -0.93
NF1-208ENST00000471572 PRSS12P56730 875 aa9.27□□□□□ -0.93
NF1-208ENST00000471572 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
NF1-208ENST00000471572 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.93
NF1-208ENST00000471572 NOVA2Q9UNW9 492 aaKnown RBP9.27□□□□□ -0.93
NF1-208ENST00000471572 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
NF1-208ENST00000471572 PIK3CDO00329 1044 aa9.26□□□□□ -0.93
NF1-208ENST00000471572 SEMA3FQ13275 785 aa9.26□□□□□ -0.93
NF1-208ENST00000471572 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
NF1-208ENST00000471572 ARID4AP29374 1257 aaPredicted RBP9.26□□□□□ -0.93
NF1-208ENST00000471572 HLA-CQ95604 372 aa9.26□□□□□ -0.93
NF1-208ENST00000471572 KDM4FA0A1W2PPD8 638 aa9.25□□□□□ -0.93
NF1-208ENST00000471572 SCNN1AP37088 669 aa9.25□□□□□ -0.93
NF1-208ENST00000471572 MARSP56192 900 aaKnown RBP9.25□□□□□ -0.93
NF1-208ENST00000471572 GUCA2AQ02747 115 aa9.25□□□□□ -0.93
NF1-208ENST00000471572 SPATA32Q96LK8 384 aa9.25□□□□□ -0.93
NF1-208ENST00000471572 FOSBP53539 338 aa9.24□□□□□ -0.93
NF1-208ENST00000471572 ANKRD33BA6NCL7 494 aa9.24□□□□□ -0.93
NF1-208ENST00000471572 HOXA2O43364 376 aa9.24□□□□□ -0.93
NF1-208ENST00000471572 KDM4AO75164 1064 aa9.24□□□□□ -0.93
NF1-208ENST00000471572 TAGLNQ01995 201 aaKnown RBP9.24□□□□□ -0.93
NF1-208ENST00000471572 FAM69CQ0P6D2 419 aa9.24□□□□□ -0.93
NF1-208ENST00000471572 CFAP99D6REC4 459 aa9.23□□□□□ -0.93
NF1-208ENST00000471572 FDX1P10109 184 aa9.23□□□□□ -0.93
NF1-208ENST00000471572 RECKO95980 971 aa9.22□□□□□ -0.93
NF1-208ENST00000471572 TSC1Q92574 1164 aa9.22□□□□□ -0.93
NF1-208ENST00000471572 C7P10643 843 aa9.22□□□□□ -0.93
NF1-208ENST00000471572 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
NF1-208ENST00000471572 TTBK1Q5TCY1 1321 aaPredicted RBP9.22□□□□□ -0.93
NF1-208ENST00000471572 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.93
NF1-208ENST00000471572 VAMP1P23763 118 aa9.21□□□□□ -0.94
NF1-208ENST00000471572 ZC3H6P61129 1189 aaKnown RBP9.21□□□□□ -0.94
NF1-208ENST00000471572 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
NF1-208ENST00000471572 USP17L3A6NCW0 530 aa9.2□□□□□ -0.94
NF1-208ENST00000471572 USP17L4A6NCW7 530 aa9.2□□□□□ -0.94
NF1-208ENST00000471572 NR6A1Q15406 480 aa9.2□□□□□ -0.94
NF1-208ENST00000471572 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
NF1-208ENST00000471572 USP17L1Q7RTZ2 530 aa9.2□□□□□ -0.94
NF1-208ENST00000471572 TMEM134Q9H6X4 195 aa9.2□□□□□ -0.94
NF1-208ENST00000471572 IER5LQ5T953 404 aa9.19□□□□□ -0.94
NF1-208ENST00000471572 PCDHGA4Q9Y5G9 962 aa9.19□□□□□ -0.94
NF1-208ENST00000471572 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
NF1-208ENST00000471572 FBXO33Q7Z6M2 555 aa9.18□□□□□ -0.94
NF1-208ENST00000471572 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L21D6R901 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 PLCG2P16885 1265 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 DNAJB2P25686 324 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
NF1-208ENST00000471572 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 MTMR2Q13614 643 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 NAALADL2Q58DX5 795 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 RDH13Q8NBN7 331 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
NF1-208ENST00000471572 BIN2Q9UBW5 565 aaPredicted RBP9.17□□□□□ -0.94
NF1-208ENST00000471572 PPP1R1BQ9UD71 204 aaPredicted RBP9.17□□□□□ -0.94
NF1-208ENST00000471572 FAM196BA6NMK8 535 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 CHRDL2Q6WN34 429 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 UBXN4Q92575 508 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
NF1-208ENST00000471572 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
NF1-208ENST00000471572 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 EIF4G2P78344 907 aaKnown RBP eCLIP9.15□□□□□ -0.94
NF1-208ENST00000471572 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 FAM174AQ8TBP5 190 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 CADPSQ9ULU8 1353 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 PER1O15534 1290 aaPredicted RBP9.15□□□□□ -0.94
NF1-208ENST00000471572 GCGRP47871 477 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 PTK7Q13308 1070 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.94
NF1-208ENST00000471572 SLF2Q8IX21 1173 aa9.15□□□□□ -0.94
NF1-208ENST00000471572 ATMINO43313 823 aaPredicted RBP9.14□□□□□ -0.95
NF1-208ENST00000471572 ATP2B4P23634 1241 aa9.14□□□□□ -0.95
NF1-208ENST00000471572 USP46P62068 366 aa9.14□□□□□ -0.95
NF1-208ENST00000471572 C19orf67A6NJJ6 358 aa9.14□□□□□ -0.95
NF1-208ENST00000471572 COL9A1P20849 921 aa9.14□□□□□ -0.95
NF1-208ENST00000471572 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
NF1-208ENST00000471572 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
NF1-208ENST00000471572 FBXO45P0C2W1 286 aa9.12□□□□□ -0.95
NF1-208ENST00000471572 SKIP12755 728 aa9.12□□□□□ -0.95
NF1-208ENST00000471572 CWC22Q9HCG8 908 aaKnown RBP9.12□□□□□ -0.95
NF1-208ENST00000471572 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
NF1-208ENST00000471572 MKRN1Q9UHC7 482 aaKnown RBP9.12□□□□□ -0.95
NF1-208ENST00000471572 ASTLQ6HA08 431 aaPredicted RBP9.11□□□□□ -0.95
NF1-208ENST00000471572 COLQQ9Y215 455 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms