RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 DXOO77932 396 aaKnown RBP5.58□□□□□ -1.52
COMMD3-209ENST00000471350 REPIN1Q9BWE0 567 aaKnown RBP5.58□□□□□ -1.52
COMMD3-209ENST00000471350 KDM4AO75164 1064 aa5.57□□□□□ -1.52
COMMD3-209ENST00000471350 SMCPP49901 116 aaPredicted RBP5.57□□□□□ -1.52
COMMD3-209ENST00000471350 MDM2Q00987 491 aaPredicted RBP5.57□□□□□ -1.52
COMMD3-209ENST00000471350 CCDC102AQ96A19 550 aa5.57□□□□□ -1.52
COMMD3-209ENST00000471350 MINK1Q8N4C8 1332 aaPredicted RBP5.56□□□□□ -1.52
COMMD3-209ENST00000471350 WNT7AO00755 349 aa5.56□□□□□ -1.52
COMMD3-209ENST00000471350 HOXA2O43364 376 aa5.56□□□□□ -1.52
COMMD3-209ENST00000471350 SMPD1P17405 629 aa5.56□□□□□ -1.52
COMMD3-209ENST00000471350 GUCA2AQ02747 115 aa5.56□□□□□ -1.52
COMMD3-209ENST00000471350 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
COMMD3-209ENST00000471350 FAM217BQ9NTX9 383 aaPredicted RBP5.56□□□□□ -1.52
COMMD3-209ENST00000471350 CD2BP2O95400 341 aaKnown RBP5.55□□□□□ -1.52
COMMD3-209ENST00000471350 SKOR1P84550 965 aa5.55□□□□□ -1.52
COMMD3-209ENST00000471350 TRIM32Q13049 653 aa5.55□□□□□ -1.52
COMMD3-209ENST00000471350 USB1Q9BQ65 265 aaKnown RBP5.55□□□□□ -1.52
COMMD3-209ENST00000471350 Q3C1V9 767 aa5.54□□□□□ -1.52
COMMD3-209ENST00000471350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.54□□□□□ -1.52
COMMD3-209ENST00000471350 VSIG10Q8N0Z9 540 aa5.54□□□□□ -1.52
COMMD3-209ENST00000471350 GMPR2Q9P2T1 348 aaKnown RBP5.54□□□□□ -1.52
COMMD3-209ENST00000471350 J3QL48 77 aa5.53□□□□□ -1.52
COMMD3-209ENST00000471350 USP46P62068 366 aa5.53□□□□□ -1.52
COMMD3-209ENST00000471350 GRIPAP1Q4V328 841 aa5.53□□□□□ -1.52
COMMD3-209ENST00000471350 SYMPKQ92797 1274 aaKnown RBP5.53□□□□□ -1.52
COMMD3-209ENST00000471350 MRGPRX2Q96LB1 330 aa5.53□□□□□ -1.52
COMMD3-209ENST00000471350 PCDHGC3Q9UN70 934 aa5.53□□□□□ -1.52
COMMD3-209ENST00000471350 CTC1Q2NKJ3 1217 aa5.52□□□□□ -1.53
COMMD3-209ENST00000471350 CYP4X1Q8N118 509 aa5.52□□□□□ -1.53
COMMD3-209ENST00000471350 GPCPD1Q9NPB8 672 aa5.52□□□□□ -1.53
COMMD3-209ENST00000471350 AXIN1O15169 862 aa5.51□□□□□ -1.53
COMMD3-209ENST00000471350 PTCRAQ6ISU1 281 aaPredicted RBP5.51□□□□□ -1.53
COMMD3-209ENST00000471350 TREML4Q6UXN2 200 aa5.51□□□□□ -1.53
COMMD3-209ENST00000471350 SNIP1Q8TAD8 396 aaKnown RBP5.51□□□□□ -1.53
COMMD3-209ENST00000471350 JUNDP17535 347 aa5.5□□□□□ -1.53
COMMD3-209ENST00000471350 NFX1Q12986 1120 aaKnown RBP5.5□□□□□ -1.53
COMMD3-209ENST00000471350 HPS1Q92902 700 aa5.5□□□□□ -1.53
COMMD3-209ENST00000471350 ZBTB24O43167 697 aaPredicted RBP5.49□□□□□ -1.53
COMMD3-209ENST00000471350 SIAH2O43255 324 aa5.49□□□□□ -1.53
COMMD3-209ENST00000471350 CLCN1P35523 988 aa5.49□□□□□ -1.53
COMMD3-209ENST00000471350 TULP1O00294 542 aaPredicted RBP5.48□□□□□ -1.53
COMMD3-209ENST00000471350 ZMYND10O75800 440 aa5.48□□□□□ -1.53
COMMD3-209ENST00000471350 SNRPBP14678 240 aaKnown RBP5.48□□□□□ -1.53
COMMD3-209ENST00000471350 RC3H1Q5TC82 1133 aaKnown RBP5.48□□□□□ -1.53
COMMD3-209ENST00000471350 RETREG3Q86VR2 466 aa5.48□□□□□ -1.53
COMMD3-209ENST00000471350 ATP13A2Q9NQ11 1180 aa5.48□□□□□ -1.53
COMMD3-209ENST00000471350 TTC24A2A3L6 582 aaPredicted RBP5.47□□□□□ -1.53
COMMD3-209ENST00000471350 WNT7BP56706 349 aa5.47□□□□□ -1.53
COMMD3-209ENST00000471350 BARGINQ6ZT62 677 aa5.47□□□□□ -1.53
COMMD3-209ENST00000471350 SPIRE2Q8WWL2 714 aa5.47□□□□□ -1.53
COMMD3-209ENST00000471350 C11orf95C9JLR9 678 aaPredicted RBP5.46□□□□□ -1.54
COMMD3-209ENST00000471350 AMHR2Q16671 573 aa5.46□□□□□ -1.54
COMMD3-209ENST00000471350 MOXD2PA6NHM9 499 aa5.45□□□□□ -1.54
COMMD3-209ENST00000471350 FDX1P10109 184 aa5.45□□□□□ -1.54
COMMD3-209ENST00000471350 NDUFV2P19404 249 aa5.45□□□□□ -1.54
COMMD3-209ENST00000471350 SSTR3P32745 418 aaPredicted RBP5.45□□□□□ -1.54
COMMD3-209ENST00000471350 CCDC24Q8N4L8 307 aa5.45□□□□□ -1.54
COMMD3-209ENST00000471350 TRIM47Q96LD4 638 aa5.45□□□□□ -1.54
COMMD3-209ENST00000471350 NUDT12Q9BQG2 462 aa5.45□□□□□ -1.54
COMMD3-209ENST00000471350 WIPF1O43516 503 aa5.44□□□□□ -1.54
COMMD3-209ENST00000471350 SH3BP2P78314 561 aa5.44□□□□□ -1.54
COMMD3-209ENST00000471350 WFS1O76024 890 aa5.43□□□□□ -1.54
COMMD3-209ENST00000471350 GIGYF2Q6Y7W6 1299 aaKnown RBP5.43□□□□□ -1.54
COMMD3-209ENST00000471350 TRIM46Q7Z4K8 759 aa5.43□□□□□ -1.54
COMMD3-209ENST00000471350 NUTM1Q86Y26 1132 aa5.43□□□□□ -1.54
COMMD3-209ENST00000471350 ZC3H15Q8WU90 426 aaKnown RBP5.43□□□□□ -1.54
COMMD3-209ENST00000471350 EVA1BQ9NVM1 165 aa5.43□□□□□ -1.54
COMMD3-209ENST00000471350 PTPRNQ16849 979 aa5.42□□□□□ -1.54
COMMD3-209ENST00000471350 PARP9Q8IXQ6 854 aa5.42□□□□□ -1.54
COMMD3-209ENST00000471350 CCNYL3P0C7X3 344 aa5.41□□□□□ -1.54
COMMD3-209ENST00000471350 MS4A1P11836 297 aa5.41□□□□□ -1.54
COMMD3-209ENST00000471350 DESI1Q6ICB0 168 aa5.41□□□□□ -1.54
COMMD3-209ENST00000471350 UNC93B1Q9H1C4 597 aa5.41□□□□□ -1.54
COMMD3-209ENST00000471350 C6orf229H3BNL8 230 aa5.4□□□□□ -1.54
COMMD3-209ENST00000471350 ALDH1A1P00352 501 aa5.4□□□□□ -1.54
COMMD3-209ENST00000471350 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.54
COMMD3-209ENST00000471350 GJA5P36382 358 aa5.4□□□□□ -1.54
COMMD3-209ENST00000471350 PRR7Q8TB68 274 aa5.4□□□□□ -1.54
COMMD3-209ENST00000471350 PCDHB15Q9Y5E8 787 aa5.4□□□□□ -1.54
COMMD3-209ENST00000471350 CFAP99D6REC4 459 aa5.39□□□□□ -1.55
COMMD3-209ENST00000471350 TERTO14746 1132 aaKnown RBP5.39□□□□□ -1.55
COMMD3-209ENST00000471350 BMP1P13497 986 aa5.39□□□□□ -1.55
COMMD3-209ENST00000471350 KCNH2Q12809 1159 aa5.39□□□□□ -1.55
COMMD3-209ENST00000471350 RSBN1LQ6PCB5 846 aaPredicted RBP5.39□□□□□ -1.55
COMMD3-209ENST00000471350 BAP1Q92560 729 aa5.39□□□□□ -1.55
COMMD3-209ENST00000471350 BEGAINQ9BUH8 593 aa5.39□□□□□ -1.55
COMMD3-209ENST00000471350 KLF16Q9BXK1 252 aaPredicted RBP5.39□□□□□ -1.55
COMMD3-209ENST00000471350 TLL2Q9Y6L7 1015 aa5.39□□□□□ -1.55
COMMD3-209ENST00000471350 TRIM66O15016 1216 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 SPTLC1O15269 473 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 F12P00748 615 aaPredicted RBP5.38□□□□□ -1.55
COMMD3-209ENST00000471350 MTMR2Q13614 643 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 LYPD8Q6UX82 237 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 MPNDQ8N594 471 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 ZNF511Q8NB15 262 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 EHBP1Q8NDI1 1231 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 TBC1D2Q9BYX2 928 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 SENP2Q9HC62 589 aa5.38□□□□□ -1.55
COMMD3-209ENST00000471350 HRCP23327 699 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms