RNA–Protein interactions for RNA: ENST00000471158.1

RFT1-204, Transcript of RFT1 homolog, humanhuman

TSL 3

Gene RFT1, Length 924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-204ENST00000471158 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
RFT1-204ENST00000471158 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
RFT1-204ENST00000471158 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
RFT1-204ENST00000471158 RALBP1Q15311 655 aa16.45■□□□□ 0.22
RFT1-204ENST00000471158 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
RFT1-204ENST00000471158 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
RFT1-204ENST00000471158 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
RFT1-204ENST00000471158 MINK1Q8N4C8 1332 aaPredicted RBP16.44■□□□□ 0.22
RFT1-204ENST00000471158 PER1O15534 1290 aaPredicted RBP16.43■□□□□ 0.22
RFT1-204ENST00000471158 MYOM1P52179 1685 aa16.43■□□□□ 0.22
RFT1-204ENST00000471158 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
RFT1-204ENST00000471158 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
RFT1-204ENST00000471158 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
RFT1-204ENST00000471158 AMOTL2Q9Y2J4 779 aa16.41■□□□□ 0.22
RFT1-204ENST00000471158 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
RFT1-204ENST00000471158 PTCH1Q13635 1447 aa16.41■□□□□ 0.22
RFT1-204ENST00000471158 TMC1Q8TDI8 760 aa16.4■□□□□ 0.22
RFT1-204ENST00000471158 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
RFT1-204ENST00000471158 ROBO2Q9HCK4 1378 aa16.39■□□□□ 0.21
RFT1-204ENST00000471158 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
RFT1-204ENST00000471158 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
RFT1-204ENST00000471158 PTPRUQ92729 1446 aa16.39■□□□□ 0.21
RFT1-204ENST00000471158 CABP2Q9NPB3 220 aa16.39■□□□□ 0.21
RFT1-204ENST00000471158 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
RFT1-204ENST00000471158 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
RFT1-204ENST00000471158 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
RFT1-204ENST00000471158 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
RFT1-204ENST00000471158 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
RFT1-204ENST00000471158 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
RFT1-204ENST00000471158 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
RFT1-204ENST00000471158 ADGRB2O60241 1585 aa16.35■□□□□ 0.21
RFT1-204ENST00000471158 NCKAP5LQ9HCH0 1330 aa16.35■□□□□ 0.21
RFT1-204ENST00000471158 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
RFT1-204ENST00000471158 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
RFT1-204ENST00000471158 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
RFT1-204ENST00000471158 CENPBP07199 599 aaPredicted RBP16.32■□□□□ 0.2
RFT1-204ENST00000471158 KCNA6P17658 529 aa16.32■□□□□ 0.2
RFT1-204ENST00000471158 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
RFT1-204ENST00000471158 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
RFT1-204ENST00000471158 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
RFT1-204ENST00000471158 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
RFT1-204ENST00000471158 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
RFT1-204ENST00000471158 USP32Q8NFA0 1604 aa16.3■□□□□ 0.2
RFT1-204ENST00000471158 ATP7BP35670 1465 aa16.3■□□□□ 0.2
RFT1-204ENST00000471158 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
RFT1-204ENST00000471158 BRD4O60885 1362 aaPredicted RBP16.3■□□□□ 0.2
RFT1-204ENST00000471158 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
RFT1-204ENST00000471158 NUDT16Q96DE0 195 aaKnown RBP16.3■□□□□ 0.2
RFT1-204ENST00000471158 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
RFT1-204ENST00000471158 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
RFT1-204ENST00000471158 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
RFT1-204ENST00000471158 NSD2O96028 1365 aa16.29■□□□□ 0.2
RFT1-204ENST00000471158 CABP1Q9NZU7 370 aa16.28■□□□□ 0.2
RFT1-204ENST00000471158 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
RFT1-204ENST00000471158 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
RFT1-204ENST00000471158 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
RFT1-204ENST00000471158 NWD1Q149M9 1564 aa16.26■□□□□ 0.19
RFT1-204ENST00000471158 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
RFT1-204ENST00000471158 ANKARQ7Z5J8 1434 aa16.24■□□□□ 0.19
RFT1-204ENST00000471158 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
RFT1-204ENST00000471158 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
RFT1-204ENST00000471158 PLEKHG3A1L390 1219 aa16.23■□□□□ 0.19
RFT1-204ENST00000471158 HSPA2P54652 639 aa16.23■□□□□ 0.19
RFT1-204ENST00000471158 MORC1Q86VD1 984 aa16.23■□□□□ 0.19
RFT1-204ENST00000471158 CDC42BPGQ6DT37 1551 aa16.22■□□□□ 0.19
RFT1-204ENST00000471158 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
RFT1-204ENST00000471158 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
RFT1-204ENST00000471158 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
RFT1-204ENST00000471158 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
RFT1-204ENST00000471158 TOPAZ1Q8N9V7 1692 aa16.21■□□□□ 0.18
RFT1-204ENST00000471158 PRR36Q9H6K5 1346 aa16.2■□□□□ 0.18
RFT1-204ENST00000471158 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
RFT1-204ENST00000471158 ADGRL3Q9HAR2 1447 aa16.2■□□□□ 0.18
RFT1-204ENST00000471158 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
RFT1-204ENST00000471158 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
RFT1-204ENST00000471158 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
RFT1-204ENST00000471158 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
RFT1-204ENST00000471158 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
RFT1-204ENST00000471158 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
RFT1-204ENST00000471158 FMN2Q9NZ56 1722 aa16.18■□□□□ 0.18
RFT1-204ENST00000471158 AKAP12Q02952 1782 aa16.18■□□□□ 0.18
RFT1-204ENST00000471158 STRCQ7RTU9 1775 aa16.17■□□□□ 0.18
RFT1-204ENST00000471158 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
RFT1-204ENST00000471158 FYB1O15117 783 aa16.16■□□□□ 0.18
RFT1-204ENST00000471158 MON2Q7Z3U7 1717 aa16.16■□□□□ 0.18
RFT1-204ENST00000471158 ANKRD26Q9UPS8 1709 aa16.16■□□□□ 0.18
RFT1-204ENST00000471158 ACEP12821 1306 aa16.16■□□□□ 0.18
RFT1-204ENST00000471158 INSRP06213 1382 aa16.15■□□□□ 0.18
RFT1-204ENST00000471158 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
RFT1-204ENST00000471158 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
RFT1-204ENST00000471158 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
RFT1-204ENST00000471158 NUTM2FA1L443 756 aa16.14■□□□□ 0.17
RFT1-204ENST00000471158 NGDNQ8NEJ9 315 aaKnown RBP16.14■□□□□ 0.17
RFT1-204ENST00000471158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
RFT1-204ENST00000471158 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
RFT1-204ENST00000471158 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
RFT1-204ENST00000471158 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
RFT1-204ENST00000471158 GGNBP2Q9H3C7 697 aa16.12■□□□□ 0.17
RFT1-204ENST00000471158 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
RFT1-204ENST00000471158 USP6P35125 1406 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms