RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 ACIN1Q9UKV3 1341 aaKnown RBP22.88■■□□□ 1.25
CNOT3-206ENST00000471126 SPHKAPQ2M3C7 1700 aa22.88■■□□□ 1.25
CNOT3-206ENST00000471126 YY1P25490 414 aa22.87■■□□□ 1.25
CNOT3-206ENST00000471126 XRN1Q8IZH2 1706 aaKnown RBP22.87■■□□□ 1.25
CNOT3-206ENST00000471126 MYOM2P54296 1465 aa22.85■■□□□ 1.25
CNOT3-206ENST00000471126 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
CNOT3-206ENST00000471126 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.25
CNOT3-206ENST00000471126 SEPT12Q8IYM1 358 aa22.83■■□□□ 1.25
CNOT3-206ENST00000471126 RALGAPBQ86X10 1494 aa22.83■■□□□ 1.25
CNOT3-206ENST00000471126 LAMC1P11047 1609 aa22.81■■□□□ 1.24
CNOT3-206ENST00000471126 BAG6P46379 1132 aa22.8■■□□□ 1.24
CNOT3-206ENST00000471126 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
CNOT3-206ENST00000471126 GLI3P10071 1580 aa22.78■■□□□ 1.24
CNOT3-206ENST00000471126 NRXN3Q9Y4C0 1643 aa22.78■■□□□ 1.24
CNOT3-206ENST00000471126 R3HDM1Q15032 1099 aaKnown RBP22.77■■□□□ 1.24
CNOT3-206ENST00000471126 NALCNQ8IZF0 1738 aa22.77■■□□□ 1.23
CNOT3-206ENST00000471126 CLTCL1P53675 1640 aa22.76■■□□□ 1.23
CNOT3-206ENST00000471126 KRT27Q7Z3Y8 459 aa22.76■■□□□ 1.23
CNOT3-206ENST00000471126 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
CNOT3-206ENST00000471126 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
CNOT3-206ENST00000471126 NPHP3Q7Z494 1330 aa22.75■■□□□ 1.23
CNOT3-206ENST00000471126 ZNF326Q5BKZ1 582 aaKnown RBP22.74■■□□□ 1.23
CNOT3-206ENST00000471126 MPHOSPH9Q99550 1183 aa22.73■■□□□ 1.23
CNOT3-206ENST00000471126 SLIT2O94813 1529 aa22.72■■□□□ 1.23
CNOT3-206ENST00000471126 EN1Q05925 392 aaPredicted RBP22.72■■□□□ 1.23
CNOT3-206ENST00000471126 ESCO1Q5FWF5 840 aa22.72■■□□□ 1.23
CNOT3-206ENST00000471126 FOXO3O43524 673 aa22.71■■□□□ 1.23
CNOT3-206ENST00000471126 ONECUT3O60422 494 aaPredicted RBP22.71■■□□□ 1.23
CNOT3-206ENST00000471126 VPS72Q15906 364 aa22.69■■□□□ 1.22
CNOT3-206ENST00000471126 ROBO2Q9HCK4 1378 aa22.68■■□□□ 1.22
CNOT3-206ENST00000471126 CCDC9Q9Y3X0 531 aaKnown RBP22.68■■□□□ 1.22
CNOT3-206ENST00000471126 BRWD3Q6RI45 1802 aa22.68■■□□□ 1.22
CNOT3-206ENST00000471126 PXDNQ92626 1479 aa22.67■■□□□ 1.22
CNOT3-206ENST00000471126 KIF1BO60333 1816 aa22.66■■□□□ 1.22
CNOT3-206ENST00000471126 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.65■■□□□ 1.22
CNOT3-206ENST00000471126 A0A0G2JS52 829 aa22.64■■□□□ 1.21
CNOT3-206ENST00000471126 MYT1Q01538 1121 aa22.64■■□□□ 1.21
CNOT3-206ENST00000471126 MARF1Q9Y4F3 1742 aaKnown RBP22.63■■□□□ 1.21
CNOT3-206ENST00000471126 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
CNOT3-206ENST00000471126 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
CNOT3-206ENST00000471126 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
CNOT3-206ENST00000471126 LRPPRCP42704 1394 aaKnown RBP22.6■■□□□ 1.21
CNOT3-206ENST00000471126 CCDC144AA2RUR9 1427 aa22.59■■□□□ 1.21
CNOT3-206ENST00000471126 SPATA31E1Q6ZUB1 1445 aa22.59■■□□□ 1.21
CNOT3-206ENST00000471126 SPATA31A3Q5VYP0 1347 aa22.58■■□□□ 1.21
CNOT3-206ENST00000471126 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
CNOT3-206ENST00000471126 EZH2Q15910 746 aaKnown RBP22.58■■□□□ 1.21
CNOT3-206ENST00000471126 FAM182BQ5T319 152 aa22.58■■□□□ 1.21
CNOT3-206ENST00000471126 NUTM2FA1L443 756 aa22.57■■□□□ 1.2
CNOT3-206ENST00000471126 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
CNOT3-206ENST00000471126 PLEKHG5O94827 1062 aa22.56■■□□□ 1.2
CNOT3-206ENST00000471126 FAM98CQ17RN3 349 aaKnown RBP22.55■■□□□ 1.2
CNOT3-206ENST00000471126 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
CNOT3-206ENST00000471126 DCAF8L1A6NGE4 600 aa22.54■■□□□ 1.2
CNOT3-206ENST00000471126 PPLO60437 1756 aa22.53■■□□□ 1.2
CNOT3-206ENST00000471126 IFT172Q9UG01 1749 aa22.53■■□□□ 1.2
CNOT3-206ENST00000471126 RPGRIP1LQ68CZ1 1315 aa22.52■■□□□ 1.2
CNOT3-206ENST00000471126 KRT28Q7Z3Y7 464 aa22.51■■□□□ 1.19
CNOT3-206ENST00000471126 USP32Q8NFA0 1604 aa22.5■■□□□ 1.19
CNOT3-206ENST00000471126 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
CNOT3-206ENST00000471126 CAMKK2Q96RR4 588 aa22.5■■□□□ 1.19
CNOT3-206ENST00000471126 DISP2A7MBM2 1401 aa22.49■■□□□ 1.19
CNOT3-206ENST00000471126 FAM83GA6ND36 823 aa22.49■■□□□ 1.19
CNOT3-206ENST00000471126 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
CNOT3-206ENST00000471126 VGFO15240 615 aaPredicted RBP22.48■■□□□ 1.19
CNOT3-206ENST00000471126 PPP1R1BQ9UD71 204 aaPredicted RBP22.48■■□□□ 1.19
CNOT3-206ENST00000471126 ZNF784Q8NCA9 323 aaPredicted RBP22.45■■□□□ 1.18
CNOT3-206ENST00000471126 CDC42BPGQ6DT37 1551 aa22.45■■□□□ 1.18
CNOT3-206ENST00000471126 TRIM37O94972 964 aa22.43■■□□□ 1.18
CNOT3-206ENST00000471126 LMOD2Q6P5Q4 547 aa22.42■■□□□ 1.18
CNOT3-206ENST00000471126 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
CNOT3-206ENST00000471126 SPON1Q9HCB6 807 aa22.42■■□□□ 1.18
CNOT3-206ENST00000471126 NRXN1Q9ULB1 1477 aa22.41■■□□□ 1.18
CNOT3-206ENST00000471126 RGPD1P0DJD0 1748 aa22.41■■□□□ 1.18
CNOT3-206ENST00000471126 APBA3O96018 575 aa22.41■■□□□ 1.18
CNOT3-206ENST00000471126 BTG4Q9NY30 223 aa22.41■■□□□ 1.18
CNOT3-206ENST00000471126 PSME1Q06323 249 aa22.4■■□□□ 1.18
CNOT3-206ENST00000471126 KCNQ2O43526 872 aa22.39■■□□□ 1.17
CNOT3-206ENST00000471126 PLCH1Q4KWH8 1693 aa22.39■■□□□ 1.17
CNOT3-206ENST00000471126 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.17
CNOT3-206ENST00000471126 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
CNOT3-206ENST00000471126 NINLQ9Y2I6 1382 aa22.38■■□□□ 1.17
CNOT3-206ENST00000471126 NWD2Q9ULI1 1742 aa22.38■■□□□ 1.17
CNOT3-206ENST00000471126 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
CNOT3-206ENST00000471126 NBPF14Q5TI25 921 aa22.38■■□□□ 1.17
CNOT3-206ENST00000471126 C1QTNF8P60827 252 aa22.37■■□□□ 1.17
CNOT3-206ENST00000471126 STK26Q9P289 416 aa22.37■■□□□ 1.17
CNOT3-206ENST00000471126 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
CNOT3-206ENST00000471126 FAM196AQ6ZSG2 479 aa22.36■■□□□ 1.17
CNOT3-206ENST00000471126 PARD3Q8TEW0 1356 aa22.36■■□□□ 1.17
CNOT3-206ENST00000471126 SPATA31A5Q5VU36 1347 aa22.35■■□□□ 1.17
CNOT3-206ENST00000471126 SPATA31A7Q8IWB4 1347 aa22.35■■□□□ 1.17
CNOT3-206ENST00000471126 PHF8Q9UPP1 1060 aa22.34■■□□□ 1.17
CNOT3-206ENST00000471126 ADGRF5Q8IZF2 1346 aa22.33■■□□□ 1.17
CNOT3-206ENST00000471126 RGL3Q3MIN7 710 aa22.33■■□□□ 1.17
CNOT3-206ENST00000471126 TNS1Q9HBL0 1735 aaKnown RBP22.33■■□□□ 1.17
CNOT3-206ENST00000471126 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
CNOT3-206ENST00000471126 ARHGEF10O15013 1369 aa22.31■■□□□ 1.16
CNOT3-206ENST00000471126 PLEKHH1Q9ULM0 1364 aa22.31■■□□□ 1.16
CNOT3-206ENST00000471126 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms