RNA–Protein interactions for RNA: ENST00000471001.1

NIPSNAP3A-202, Transcript of nipsnap homolog 3A, humanhuman

TSL 2

Gene NIPSNAP3A, Length 1,148 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-202ENST00000471001 CCDC102AQ96A19 550 aa13.12□□□□□ -0.31
NIPSNAP3A-202ENST00000471001 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
NIPSNAP3A-202ENST00000471001 AVPP01185 164 aa13.1□□□□□ -0.31
NIPSNAP3A-202ENST00000471001 CRIPAKQ8N1N5 446 aa13.1□□□□□ -0.31
NIPSNAP3A-202ENST00000471001 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
NIPSNAP3A-202ENST00000471001 Q3C1V9 767 aa13.09□□□□□ -0.31
NIPSNAP3A-202ENST00000471001 DXOO77932 396 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 GUCA2AQ02747 115 aa13.08□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 VSIG10Q8N0Z9 540 aa13.08□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 TRIM32Q13049 653 aa13.07□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 HOXA2O43364 376 aa13.06□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 ZBTB24O43167 697 aaPredicted RBP13.04□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 WNT7AO00755 349 aa13.03□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 USP46P62068 366 aa13.03□□□□□ -0.32
NIPSNAP3A-202ENST00000471001 SMPD1P17405 629 aa13.02□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 SYMPKQ92797 1274 aaKnown RBP13.02□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 REPIN1Q9BWE0 567 aaKnown RBP13.02□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 LCE2AQ5TA79 106 aaPredicted RBP13.01□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 TULP1O00294 542 aaPredicted RBP13□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 MRGPRX2Q96LB1 330 aa13□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 GMPR2Q9P2T1 348 aaKnown RBP13□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 AXIN1O15169 862 aa12.99□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 SMCPP49901 116 aaPredicted RBP12.99□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 J3QL48 77 aa12.98□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 CLCN1P35523 988 aa12.98□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 SKOR1P84550 965 aa12.98□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.98□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 CTC1Q2NKJ3 1217 aa12.97□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 CCDC24Q8N4L8 307 aa12.96□□□□□ -0.33
NIPSNAP3A-202ENST00000471001 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 JUNDP17535 347 aa12.93□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 PTCRAQ6ISU1 281 aaPredicted RBP12.92□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 HPS1Q92902 700 aa12.91□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
NIPSNAP3A-202ENST00000471001 RETREG3Q86VR2 466 aa12.89□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 WNT7BP56706 349 aa12.88□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 FDX1P10109 184 aa12.87□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 NUDT12Q9BQG2 462 aa12.86□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 SNRPBP14678 240 aaKnown RBP12.85□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 NDUFV2P19404 249 aa12.85□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
NIPSNAP3A-202ENST00000471001 ZMYND10O75800 440 aa12.83□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 LCE2CQ5TA81 110 aa12.83□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 MOXD2PA6NHM9 499 aa12.82□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 SIAH2O43255 324 aa12.82□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 NFX1Q12986 1120 aaKnown RBP12.82□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 AMHR2Q16671 573 aa12.81□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 ZC3H15Q8WU90 426 aaKnown RBP12.8□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 WFS1O76024 890 aa12.79□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 ALDH1A1P00352 501 aa12.79□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 MS4A1P11836 297 aa12.78□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 SH3BP2P78314 561 aa12.78□□□□□ -0.36
NIPSNAP3A-202ENST00000471001 CCNYL3P0C7X3 344 aa12.77□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 EHBP1Q8NDI1 1231 aa12.76□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 PTPRNQ16849 979 aa12.75□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 PRR7Q8TB68 274 aa12.74□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 UNC93B1Q9H1C4 597 aa12.74□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 LINC01559Q495D7 138 aa12.73□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 EVA1BQ9NVM1 165 aa12.73□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 BEGAINQ9BUH8 593 aa12.72□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 SENP2Q9HC62 589 aa12.71□□□□□ -0.37
NIPSNAP3A-202ENST00000471001 BMP1P13497 986 aa12.7□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 MTMR2Q13614 643 aa12.7□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 BAP1Q92560 729 aa12.7□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 TBC1D2Q9BYX2 928 aa12.7□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 TRIM46Q7Z4K8 759 aa12.69□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 TLL2Q9Y6L7 1015 aa12.69□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 TERTO14746 1132 aaKnown RBP12.68□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 DESI1Q6ICB0 168 aa12.67□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 TRIM66O15016 1216 aa12.66□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 WIPF1O43516 503 aa12.66□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 CFAP99D6REC4 459 aa12.65□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
NIPSNAP3A-202ENST00000471001 CAPN5O15484 640 aaPredicted RBP12.64□□□□□ -0.39
NIPSNAP3A-202ENST00000471001 SPDYE5A6NIY4 337 aa12.63□□□□□ -0.39
NIPSNAP3A-202ENST00000471001 GJA5P36382 358 aa12.63□□□□□ -0.39
NIPSNAP3A-202ENST00000471001 SPTLC1O15269 473 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms