RNA–Protein interactions for RNA: ENST00000470907.6

LOXL3-208, Transcript of lysyl oxidase like 3, humanhuman

TSL 2

Gene LOXL3, Length 2,837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-208ENST00000470907 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
LOXL3-208ENST00000470907 SSFA2P28290 1259 aa18.18■□□□□ 0.5
LOXL3-208ENST00000470907 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
LOXL3-208ENST00000470907 DDX49Q9Y6V7 483 aaKnown RBP18.17■□□□□ 0.5
LOXL3-208ENST00000470907 NCOA3Q9Y6Q9 1424 aa18.16■□□□□ 0.5
LOXL3-208ENST00000470907 NCLP19338 710 aaKnown RBP18.16■□□□□ 0.5
LOXL3-208ENST00000470907 SKOR2Q2VWA4 1001 aaPredicted RBP18.16■□□□□ 0.5
LOXL3-208ENST00000470907 SMC5Q8IY18 1101 aa18.15■□□□□ 0.5
LOXL3-208ENST00000470907 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
LOXL3-208ENST00000470907 TNNT2P45379 298 aaPredicted RBP18.14■□□□□ 0.5
LOXL3-208ENST00000470907 ABCC2Q92887 1545 aa18.14■□□□□ 0.49
LOXL3-208ENST00000470907 RBM42Q9BTD8 480 aaKnown RBP18.14■□□□□ 0.49
LOXL3-208ENST00000470907 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
LOXL3-208ENST00000470907 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.13■□□□□ 0.49
LOXL3-208ENST00000470907 ZMYM3Q14202 1370 aa18.13■□□□□ 0.49
LOXL3-208ENST00000470907 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
LOXL3-208ENST00000470907 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
LOXL3-208ENST00000470907 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
LOXL3-208ENST00000470907 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
LOXL3-208ENST00000470907 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
LOXL3-208ENST00000470907 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
LOXL3-208ENST00000470907 CAVIN1Q6NZI2 390 aaKnown RBP18.11■□□□□ 0.49
LOXL3-208ENST00000470907 JARID2Q92833 1246 aaPredicted RBP18.11■□□□□ 0.49
LOXL3-208ENST00000470907 SNX21Q969T3 373 aa18.1■□□□□ 0.49
LOXL3-208ENST00000470907 ABCC10Q5T3U5 1492 aa18.1■□□□□ 0.49
LOXL3-208ENST00000470907 SMAP1Q8IYB5 467 aaPredicted RBP18.09■□□□□ 0.49
LOXL3-208ENST00000470907 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
LOXL3-208ENST00000470907 ABCA8O94911 1581 aa18.09■□□□□ 0.49
LOXL3-208ENST00000470907 RBM25P49756 843 aaKnown RBP18.09■□□□□ 0.49
LOXL3-208ENST00000470907 GAS2L2Q8NHY3 880 aa18.09■□□□□ 0.49
LOXL3-208ENST00000470907 RBSNQ9H1K0 784 aa18.09■□□□□ 0.49
LOXL3-208ENST00000470907 CHD1O14646 1710 aa18.09■□□□□ 0.49
LOXL3-208ENST00000470907 LNPKQ9C0E8 428 aa18.08■□□□□ 0.49
LOXL3-208ENST00000470907 TERF1P54274 439 aa18.08■□□□□ 0.48
LOXL3-208ENST00000470907 TCP11L2Q8N4U5 519 aa18.08■□□□□ 0.48
LOXL3-208ENST00000470907 NOL7Q9UMY1 257 aaKnown RBP18.08■□□□□ 0.48
LOXL3-208ENST00000470907 GOLGA6L22H0YM25 854 aa18.08■□□□□ 0.48
LOXL3-208ENST00000470907 MCTP1Q6DN14 999 aa18.08■□□□□ 0.48
LOXL3-208ENST00000470907 KIF2CQ99661 725 aa18.08■□□□□ 0.48
LOXL3-208ENST00000470907 BAG4O95429 457 aaKnown RBP18.07■□□□□ 0.48
LOXL3-208ENST00000470907 KLHL40Q2TBA0 621 aa18.07■□□□□ 0.48
LOXL3-208ENST00000470907 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
LOXL3-208ENST00000470907 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
LOXL3-208ENST00000470907 CDC42BPAQ5VT25 1732 aa18.07■□□□□ 0.48
LOXL3-208ENST00000470907 PLXNC1O60486 1568 aa18.07■□□□□ 0.48
LOXL3-208ENST00000470907 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
LOXL3-208ENST00000470907 TSC1Q92574 1164 aa18.06■□□□□ 0.48
LOXL3-208ENST00000470907 ZSCAN23Q3MJ62 389 aa18.05■□□□□ 0.48
LOXL3-208ENST00000470907 ZNF500O60304 480 aaPredicted RBP18.05■□□□□ 0.48
LOXL3-208ENST00000470907 LAMC1P11047 1609 aa18.05■□□□□ 0.48
LOXL3-208ENST00000470907 K7ELQ4 463 aaPredicted RBP18.04■□□□□ 0.48
LOXL3-208ENST00000470907 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
LOXL3-208ENST00000470907 FGD1P98174 961 aa18.04■□□□□ 0.48
LOXL3-208ENST00000470907 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
LOXL3-208ENST00000470907 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
LOXL3-208ENST00000470907 RBM27Q9P2N5 1060 aaKnown RBP18.04■□□□□ 0.48
LOXL3-208ENST00000470907 TSR2Q969E8 191 aaKnown RBP18.04■□□□□ 0.48
LOXL3-208ENST00000470907 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
LOXL3-208ENST00000470907 PTMSP20962 102 aa18.03■□□□□ 0.48
LOXL3-208ENST00000470907 AK9Q5TCS8 1911 aa18.03■□□□□ 0.48
LOXL3-208ENST00000470907 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
LOXL3-208ENST00000470907 DYNC1I1O14576 645 aa18.02■□□□□ 0.48
LOXL3-208ENST00000470907 CDCA8Q53HL2 280 aa18.02■□□□□ 0.48
LOXL3-208ENST00000470907 CHAMP1Q96JM3 812 aa18.02■□□□□ 0.48
LOXL3-208ENST00000470907 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.48
LOXL3-208ENST00000470907 PKP1Q13835 747 aa18.02■□□□□ 0.47
LOXL3-208ENST00000470907 ZKSCAN5Q9Y2L8 839 aa18.02■□□□□ 0.47
LOXL3-208ENST00000470907 TRIM27P14373 513 aa18.01■□□□□ 0.47
LOXL3-208ENST00000470907 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
LOXL3-208ENST00000470907 MPNDQ8N594 471 aa18.01■□□□□ 0.47
LOXL3-208ENST00000470907 SYNMO15061 1565 aa18.01■□□□□ 0.47
LOXL3-208ENST00000470907 RUNDC1Q96C34 613 aa18■□□□□ 0.47
LOXL3-208ENST00000470907 ZNF445P59923 1031 aa18■□□□□ 0.47
LOXL3-208ENST00000470907 NGEFQ8N5V2 710 aa18■□□□□ 0.47
LOXL3-208ENST00000470907 EIF2AK4Q9P2K8 1649 aaKnown RBP18■□□□□ 0.47
LOXL3-208ENST00000470907 FAM177BA6PVY3 158 aa17.99■□□□□ 0.47
LOXL3-208ENST00000470907 HDAC1Q13547 482 aaPredicted RBP17.99■□□□□ 0.47
LOXL3-208ENST00000470907 PDLIM2Q96JY6 352 aa17.99■□□□□ 0.47
LOXL3-208ENST00000470907 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
LOXL3-208ENST00000470907 RNF214Q8ND24 703 aa17.99■□□□□ 0.47
LOXL3-208ENST00000470907 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
LOXL3-208ENST00000470907 CBX1P83916 185 aa17.99■□□□□ 0.47
LOXL3-208ENST00000470907 DMTNQ08495 405 aa17.98■□□□□ 0.47
LOXL3-208ENST00000470907 HS1BP3Q53T59 392 aa17.98■□□□□ 0.47
LOXL3-208ENST00000470907 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
LOXL3-208ENST00000470907 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
LOXL3-208ENST00000470907 LMBRD1Q9NUN5 540 aa17.97■□□□□ 0.47
LOXL3-208ENST00000470907 PRPF40AO75400 957 aaKnown RBP17.96■□□□□ 0.47
LOXL3-208ENST00000470907 MTERF4Q7Z6M4 381 aaKnown RBP17.96■□□□□ 0.47
LOXL3-208ENST00000470907 TMEM57Q8N5G2 664 aa17.96■□□□□ 0.47
LOXL3-208ENST00000470907 NPC1L1Q9UHC9 1359 aa17.96■□□□□ 0.47
LOXL3-208ENST00000470907 DNTTIP2Q5QJE6 756 aaKnown RBP17.96■□□□□ 0.47
LOXL3-208ENST00000470907 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
LOXL3-208ENST00000470907 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
LOXL3-208ENST00000470907 MYOM1P52179 1685 aa17.95■□□□□ 0.46
LOXL3-208ENST00000470907 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
LOXL3-208ENST00000470907 SYCE3A1L190 88 aa17.95■□□□□ 0.46
LOXL3-208ENST00000470907 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
LOXL3-208ENST00000470907 NUCB1Q02818 461 aa17.94■□□□□ 0.46
LOXL3-208ENST00000470907 EXOSC9Q06265 439 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms