RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
SND1-208ENST00000470463 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
SND1-208ENST00000470463 STRCQ7RTU9 1775 aa14.88□□□□□ -0.03
SND1-208ENST00000470463 TXNDC2Q86VQ3 553 aa14.88□□□□□ -0.03
SND1-208ENST00000470463 TMC1Q8TDI8 760 aa14.88□□□□□ -0.03
SND1-208ENST00000470463 TECPR2O15040 1411 aa14.88□□□□□ -0.03
SND1-208ENST00000470463 NRXN3Q9Y4C0 1643 aa14.88□□□□□ -0.03
SND1-208ENST00000470463 DIP2AQ14689 1571 aa14.87□□□□□ -0.03
SND1-208ENST00000470463 STK26Q9P289 416 aa14.87□□□□□ -0.03
SND1-208ENST00000470463 LTBP4Q8N2S1 1624 aa14.87□□□□□ -0.03
SND1-208ENST00000470463 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
SND1-208ENST00000470463 KNDC1Q76NI1 1749 aa14.86□□□□□ -0.03
SND1-208ENST00000470463 TOM1O60784 492 aa14.86□□□□□ -0.03
SND1-208ENST00000470463 BCANQ96GW7 911 aa14.86□□□□□ -0.03
SND1-208ENST00000470463 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
SND1-208ENST00000470463 TBX22Q9Y458 520 aa14.85□□□□□ -0.03
SND1-208ENST00000470463 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
SND1-208ENST00000470463 CPS1P31327 1500 aa14.84□□□□□ -0.03
SND1-208ENST00000470463 TULP4Q9NRJ4 1543 aa14.84□□□□□ -0.03
SND1-208ENST00000470463 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
SND1-208ENST00000470463 INSRP06213 1382 aa14.84□□□□□ -0.03
SND1-208ENST00000470463 ZNF142P52746 1687 aaPredicted RBP14.84□□□□□ -0.03
SND1-208ENST00000470463 NSD2O96028 1365 aa14.83□□□□□ -0.04
SND1-208ENST00000470463 ANKRD36BQ8N2N9 1353 aa14.83□□□□□ -0.04
SND1-208ENST00000470463 PIK3R4Q99570 1358 aa14.83□□□□□ -0.04
SND1-208ENST00000470463 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.04
SND1-208ENST00000470463 MED14O60244 1454 aa14.82□□□□□ -0.04
SND1-208ENST00000470463 SRPK2P78362 688 aaKnown RBP14.82□□□□□ -0.04
SND1-208ENST00000470463 TERF2IPQ9NYB0 399 aa14.82□□□□□ -0.04
SND1-208ENST00000470463 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
SND1-208ENST00000470463 METP08581 1390 aa14.82□□□□□ -0.04
SND1-208ENST00000470463 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
SND1-208ENST00000470463 LTKP29376 864 aa14.81□□□□□ -0.04
SND1-208ENST00000470463 CC2D1BQ5T0F9 858 aaKnown RBP14.81□□□□□ -0.04
SND1-208ENST00000470463 FAM9BQ8IZU0 186 aa14.8□□□□□ -0.04
SND1-208ENST00000470463 CGNL1Q0VF96 1302 aa14.8□□□□□ -0.04
SND1-208ENST00000470463 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.045e-6■□□□□ 10.1
SND1-208ENST00000470463 ANKLE2Q86XL3 938 aa14.79□□□□□ -0.04
SND1-208ENST00000470463 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
SND1-208ENST00000470463 PNISRQ8TF01 805 aaKnown RBP14.79□□□□□ -0.04
SND1-208ENST00000470463 PIP4K2BP78356 416 aa14.78□□□□□ -0.04
SND1-208ENST00000470463 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
SND1-208ENST00000470463 HDGFL2Q7Z4V5 671 aaPredicted RBP14.78□□□□□ -0.04
SND1-208ENST00000470463 PTCH1Q13635 1447 aa14.77□□□□□ -0.04
SND1-208ENST00000470463 HSPA1LP34931 641 aa14.77□□□□□ -0.05
SND1-208ENST00000470463 CCDC184Q52MB2 194 aa14.77□□□□□ -0.05
SND1-208ENST00000470463 CDK19Q9BWU1 502 aa14.77□□□□□ -0.05
SND1-208ENST00000470463 SLC12A5Q9H2X9 1139 aa14.77□□□□□ -0.05
SND1-208ENST00000470463 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
SND1-208ENST00000470463 NSD3Q9BZ95 1437 aa14.76□□□□□ -0.05
SND1-208ENST00000470463 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
SND1-208ENST00000470463 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
SND1-208ENST00000470463 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
SND1-208ENST00000470463 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
SND1-208ENST00000470463 CARD14Q9BXL6 1004 aa14.75□□□□□ -0.05
SND1-208ENST00000470463 ADGRB2O60241 1585 aa14.75□□□□□ -0.05
SND1-208ENST00000470463 ATP7BP35670 1465 aa14.75□□□□□ -0.05
SND1-208ENST00000470463 PPP2R1AP30153 589 aa14.74□□□□□ -0.05
SND1-208ENST00000470463 WAPLQ7Z5K2 1190 aa14.74□□□□□ -0.05
SND1-208ENST00000470463 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
SND1-208ENST00000470463 MORC1Q86VD1 984 aa14.72□□□□□ -0.05
SND1-208ENST00000470463 AMOTL2Q9Y2J4 779 aa14.72□□□□□ -0.05
SND1-208ENST00000470463 SLC26A8Q96RN1 970 aa14.71□□□□□ -0.05
SND1-208ENST00000470463 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
SND1-208ENST00000470463 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.05
SND1-208ENST00000470463 A0A1W2PP64 1363 aa14.71□□□□□ -0.06
SND1-208ENST00000470463 ROBO2Q9HCK4 1378 aa14.71□□□□□ -0.06
SND1-208ENST00000470463 PLEKHH1Q9ULM0 1364 aa14.71□□□□□ -0.06
SND1-208ENST00000470463 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.068e-6■■□□□ 11.7
SND1-208ENST00000470463 PTPRUQ92729 1446 aa14.68□□□□□ -0.06
SND1-208ENST00000470463 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
SND1-208ENST00000470463 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
SND1-208ENST00000470463 XRN1Q8IZH2 1706 aaKnown RBP14.68□□□□□ -0.06
SND1-208ENST00000470463 POLR3AO14802 1390 aaPredicted RBP14.68□□□□□ -0.06
SND1-208ENST00000470463 NGEFQ8N5V2 710 aa14.67□□□□□ -0.06
SND1-208ENST00000470463 NUDT16Q96DE0 195 aaKnown RBP14.67□□□□□ -0.06
SND1-208ENST00000470463 CFAP53Q96M91 514 aa14.67□□□□□ -0.06
SND1-208ENST00000470463 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
SND1-208ENST00000470463 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
SND1-208ENST00000470463 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
SND1-208ENST00000470463 CD163L1Q9NR16 1453 aa14.66□□□□□ -0.06
SND1-208ENST00000470463 NPHP4O75161 1426 aaPredicted RBP14.66□□□□□ -0.06
SND1-208ENST00000470463 PDE3BQ13370 1112 aa14.65□□□□□ -0.06
SND1-208ENST00000470463 BLMP54132 1417 aaPredicted RBP14.65□□□□□ -0.06
SND1-208ENST00000470463 CDC42BPGQ6DT37 1551 aa14.64□□□□□ -0.07
SND1-208ENST00000470463 ANKARQ7Z5J8 1434 aa14.64□□□□□ -0.07
SND1-208ENST00000470463 ANKRD26Q9UPS8 1709 aa14.63□□□□□ -0.07
SND1-208ENST00000470463 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
SND1-208ENST00000470463 CHD2O14647 1828 aaKnown RBP14.62□□□□□ -0.07
SND1-208ENST00000470463 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.62□□□□□ -0.07
SND1-208ENST00000470463 FYB1O15117 783 aa14.61□□□□□ -0.07
SND1-208ENST00000470463 NEFLP07196 543 aa14.61□□□□□ -0.07
SND1-208ENST00000470463 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
SND1-208ENST00000470463 KCNA6P17658 529 aa14.6□□□□□ -0.07
SND1-208ENST00000470463 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
SND1-208ENST00000470463 TOPAZ1Q8N9V7 1692 aa14.59□□□□□ -0.07
SND1-208ENST00000470463 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.07
SND1-208ENST00000470463 MON2Q7Z3U7 1717 aa14.58□□□□□ -0.07
SND1-208ENST00000470463 ADAMTS8Q9UP79 889 aa14.58□□□□□ -0.08
SND1-208ENST00000470463 NUDCQ9Y266 331 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms