RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
SFXN3-205ENST00000470252 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
SFXN3-205ENST00000470252 MYO3AQ8NEV4 1616 aa16.87■□□□□ 0.29
SFXN3-205ENST00000470252 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
SFXN3-205ENST00000470252 RARSP54136 660 aaKnown RBP16.87■□□□□ 0.29
SFXN3-205ENST00000470252 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
SFXN3-205ENST00000470252 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
SFXN3-205ENST00000470252 PMFBP1Q8TBY8 1022 aa16.86■□□□□ 0.29
SFXN3-205ENST00000470252 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
SFXN3-205ENST00000470252 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
SFXN3-205ENST00000470252 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
SFXN3-205ENST00000470252 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
SFXN3-205ENST00000470252 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
SFXN3-205ENST00000470252 ARAP3Q8WWN8 1544 aa16.84■□□□□ 0.29
SFXN3-205ENST00000470252 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
SFXN3-205ENST00000470252 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
SFXN3-205ENST00000470252 RLBP1P12271 317 aa16.84■□□□□ 0.29
SFXN3-205ENST00000470252 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
SFXN3-205ENST00000470252 POGKQ9P215 609 aa16.84■□□□□ 0.29
SFXN3-205ENST00000470252 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
SFXN3-205ENST00000470252 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
SFXN3-205ENST00000470252 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
SFXN3-205ENST00000470252 AAMPQ13685 434 aa16.83■□□□□ 0.28
SFXN3-205ENST00000470252 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
SFXN3-205ENST00000470252 PDZRN3Q9UPQ7 1066 aa16.82■□□□□ 0.28
SFXN3-205ENST00000470252 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
SFXN3-205ENST00000470252 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
SFXN3-205ENST00000470252 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
SFXN3-205ENST00000470252 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
SFXN3-205ENST00000470252 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 EFCAB6Q5THR3 1501 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
SFXN3-205ENST00000470252 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
SFXN3-205ENST00000470252 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
SFXN3-205ENST00000470252 NOS1P29475 1434 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 FANCAO15360 1455 aa16.79■□□□□ 0.28
SFXN3-205ENST00000470252 ANTXR1Q9H6X2 564 aa16.78■□□□□ 0.28
SFXN3-205ENST00000470252 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
SFXN3-205ENST00000470252 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
SFXN3-205ENST00000470252 MTHFSP49914 203 aa16.78■□□□□ 0.28
SFXN3-205ENST00000470252 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
SFXN3-205ENST00000470252 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
SFXN3-205ENST00000470252 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
SFXN3-205ENST00000470252 FAM43AQ8N2R8 423 aa16.77■□□□□ 0.28
SFXN3-205ENST00000470252 CFAP53Q96M91 514 aa16.77■□□□□ 0.28
SFXN3-205ENST00000470252 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
SFXN3-205ENST00000470252 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
SFXN3-205ENST00000470252 ZNF518AQ6AHZ1 1483 aa16.76■□□□□ 0.27
SFXN3-205ENST00000470252 USP32Q8NFA0 1604 aa16.76■□□□□ 0.27
SFXN3-205ENST00000470252 KIF13AQ9H1H9 1805 aa16.75■□□□□ 0.27
SFXN3-205ENST00000470252 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
SFXN3-205ENST00000470252 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
SFXN3-205ENST00000470252 PPLO60437 1756 aa16.75■□□□□ 0.27
SFXN3-205ENST00000470252 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
SFXN3-205ENST00000470252 ADGRB3O60242 1522 aa16.74■□□□□ 0.27
SFXN3-205ENST00000470252 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
SFXN3-205ENST00000470252 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
SFXN3-205ENST00000470252 L1TD1Q5T7N2 865 aaKnown RBP16.72■□□□□ 0.27
SFXN3-205ENST00000470252 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
SFXN3-205ENST00000470252 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
SFXN3-205ENST00000470252 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
SFXN3-205ENST00000470252 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
SFXN3-205ENST00000470252 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
SFXN3-205ENST00000470252 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
SFXN3-205ENST00000470252 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
SFXN3-205ENST00000470252 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
SFXN3-205ENST00000470252 C14orf93Q9H972 538 aaKnown RBP16.71■□□□□ 0.27
SFXN3-205ENST00000470252 KIDINS220Q9ULH0 1771 aa16.7■□□□□ 0.26
SFXN3-205ENST00000470252 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
SFXN3-205ENST00000470252 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
SFXN3-205ENST00000470252 TSR2Q969E8 191 aaKnown RBP16.68■□□□□ 0.26
SFXN3-205ENST00000470252 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
SFXN3-205ENST00000470252 MFAP1P55081 439 aaKnown RBP16.68■□□□□ 0.26
SFXN3-205ENST00000470252 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
SFXN3-205ENST00000470252 ARXQ96QS3 562 aa16.67■□□□□ 0.26
SFXN3-205ENST00000470252 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
SFXN3-205ENST00000470252 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
SFXN3-205ENST00000470252 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
SFXN3-205ENST00000470252 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
SFXN3-205ENST00000470252 MCM4P33991 863 aa16.65■□□□□ 0.26
SFXN3-205ENST00000470252 EXOSC9Q06265 439 aaKnown RBP16.65■□□□□ 0.26
SFXN3-205ENST00000470252 NSD2O96028 1365 aa16.65■□□□□ 0.26
SFXN3-205ENST00000470252 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
SFXN3-205ENST00000470252 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
SFXN3-205ENST00000470252 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
SFXN3-205ENST00000470252 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
SFXN3-205ENST00000470252 GLI2P10070 1586 aa16.65■□□□□ 0.26
SFXN3-205ENST00000470252 TRIM27P14373 513 aa16.64■□□□□ 0.25
SFXN3-205ENST00000470252 ARHGEF28Q8N1W1 1705 aaKnown RBP16.64■□□□□ 0.25
SFXN3-205ENST00000470252 NPATQ14207 1427 aa16.64■□□□□ 0.25
SFXN3-205ENST00000470252 TULP4Q9NRJ4 1543 aa16.63■□□□□ 0.25
SFXN3-205ENST00000470252 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
SFXN3-205ENST00000470252 HDAC1Q13547 482 aaPredicted RBP16.63■□□□□ 0.25
SFXN3-205ENST00000470252 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
SFXN3-205ENST00000470252 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
SFXN3-205ENST00000470252 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
SFXN3-205ENST00000470252 U2SURPO15042 1029 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms