RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
COMMD2-202ENST00000469896 BCL9LQ86UU0 1499 aa17.83■□□□□ 0.45
COMMD2-202ENST00000469896 UNC13BO14795 1591 aa17.83■□□□□ 0.44
COMMD2-202ENST00000469896 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
COMMD2-202ENST00000469896 SOS2Q07890 1332 aaPredicted RBP17.82■□□□□ 0.44
COMMD2-202ENST00000469896 TMEM131LA2VDJ0 1609 aa17.82■□□□□ 0.44
COMMD2-202ENST00000469896 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
COMMD2-202ENST00000469896 GCC2Q8IWJ2 1684 aa17.81■□□□□ 0.44
COMMD2-202ENST00000469896 BAG6P46379 1132 aa17.8■□□□□ 0.44
COMMD2-202ENST00000469896 IFFO2Q5TF58 517 aa17.8■□□□□ 0.44
COMMD2-202ENST00000469896 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
COMMD2-202ENST00000469896 MYO5BQ9ULV0 1848 aa17.78■□□□□ 0.44
COMMD2-202ENST00000469896 ABCC5O15440 1437 aa17.78■□□□□ 0.44
COMMD2-202ENST00000469896 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
COMMD2-202ENST00000469896 LAMC1P11047 1609 aa17.76■□□□□ 0.43
COMMD2-202ENST00000469896 MYOM2P54296 1465 aa17.75■□□□□ 0.43
COMMD2-202ENST00000469896 RALGAPBQ86X10 1494 aa17.75■□□□□ 0.43
COMMD2-202ENST00000469896 XRN1Q8IZH2 1706 aaKnown RBP17.75■□□□□ 0.43
COMMD2-202ENST00000469896 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
COMMD2-202ENST00000469896 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
COMMD2-202ENST00000469896 SPHKAPQ2M3C7 1700 aa17.75■□□□□ 0.43
COMMD2-202ENST00000469896 POTEHQ6S545 545 aa17.74■□□□□ 0.43
COMMD2-202ENST00000469896 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
COMMD2-202ENST00000469896 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
COMMD2-202ENST00000469896 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
COMMD2-202ENST00000469896 ORAI2Q96SN7 254 aa17.72■□□□□ 0.43
COMMD2-202ENST00000469896 DAPK1P53355 1430 aa17.72■□□□□ 0.43
COMMD2-202ENST00000469896 R3HDM1Q15032 1099 aaKnown RBP17.71■□□□□ 0.43
COMMD2-202ENST00000469896 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
COMMD2-202ENST00000469896 GLI3P10071 1580 aa17.7■□□□□ 0.42
COMMD2-202ENST00000469896 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
COMMD2-202ENST00000469896 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
COMMD2-202ENST00000469896 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
COMMD2-202ENST00000469896 METP08581 1390 aa17.67■□□□□ 0.42
COMMD2-202ENST00000469896 NALCNQ8IZF0 1738 aa17.67■□□□□ 0.42
COMMD2-202ENST00000469896 PTPN23Q9H3S7 1636 aa17.66■□□□□ 0.42
COMMD2-202ENST00000469896 SLIT2O94813 1529 aa17.66■□□□□ 0.42
COMMD2-202ENST00000469896 SENP3-EIF4A1A0A087X0R7 540 aa17.65■□□□□ 0.42
COMMD2-202ENST00000469896 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
COMMD2-202ENST00000469896 A0A0G2JS52 829 aa17.64■□□□□ 0.41
COMMD2-202ENST00000469896 MYT1Q01538 1121 aa17.64■□□□□ 0.41
COMMD2-202ENST00000469896 EN1Q05925 392 aaPredicted RBP17.64■□□□□ 0.41
COMMD2-202ENST00000469896 CCDC9Q9Y3X0 531 aaKnown RBP17.64■□□□□ 0.41
COMMD2-202ENST00000469896 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
COMMD2-202ENST00000469896 ONECUT3O60422 494 aaPredicted RBP17.63■□□□□ 0.41
COMMD2-202ENST00000469896 VPS72Q15906 364 aa17.63■□□□□ 0.41
COMMD2-202ENST00000469896 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
COMMD2-202ENST00000469896 NRXN3Q9Y4C0 1643 aa17.61■□□□□ 0.41
COMMD2-202ENST00000469896 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
COMMD2-202ENST00000469896 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
COMMD2-202ENST00000469896 ANKRD50Q9ULJ7 1429 aa17.61■□□□□ 0.41
COMMD2-202ENST00000469896 PPP1R1BQ9UD71 204 aaPredicted RBP17.6■□□□□ 0.41
COMMD2-202ENST00000469896 PXDNQ92626 1479 aa17.59■□□□□ 0.41
COMMD2-202ENST00000469896 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
COMMD2-202ENST00000469896 ZNF326Q5BKZ1 582 aaKnown RBP17.59■□□□□ 0.41
COMMD2-202ENST00000469896 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.4
COMMD2-202ENST00000469896 ADGRL2O95490 1459 aa17.57■□□□□ 0.4
COMMD2-202ENST00000469896 FOXO3O43524 673 aa17.57■□□□□ 0.4
COMMD2-202ENST00000469896 DISP2A7MBM2 1401 aa17.56■□□□□ 0.4
COMMD2-202ENST00000469896 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
COMMD2-202ENST00000469896 NINLQ9Y2I6 1382 aa17.54■□□□□ 0.4
COMMD2-202ENST00000469896 ZNF784Q8NCA9 323 aaPredicted RBP17.53■□□□□ 0.4
COMMD2-202ENST00000469896 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
COMMD2-202ENST00000469896 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
COMMD2-202ENST00000469896 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
COMMD2-202ENST00000469896 USP32Q8NFA0 1604 aa17.52■□□□□ 0.4
COMMD2-202ENST00000469896 HFM1A2PYH4 1435 aa17.51■□□□□ 0.39
COMMD2-202ENST00000469896 EZH2Q15910 746 aaKnown RBP17.51■□□□□ 0.39
COMMD2-202ENST00000469896 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
COMMD2-202ENST00000469896 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
COMMD2-202ENST00000469896 E9PCH4 1651 aa17.51■□□□□ 0.39
COMMD2-202ENST00000469896 PARD3Q8TEW0 1356 aa17.51■□□□□ 0.39
COMMD2-202ENST00000469896 SPATA31A3Q5VYP0 1347 aa17.5■□□□□ 0.39
COMMD2-202ENST00000469896 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
COMMD2-202ENST00000469896 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
COMMD2-202ENST00000469896 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
COMMD2-202ENST00000469896 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
COMMD2-202ENST00000469896 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
COMMD2-202ENST00000469896 CAMKK2Q96RR4 588 aa17.47■□□□□ 0.39
COMMD2-202ENST00000469896 NWD2Q9ULI1 1742 aa17.47■□□□□ 0.39
COMMD2-202ENST00000469896 CCDC144AA2RUR9 1427 aa17.47■□□□□ 0.39
COMMD2-202ENST00000469896 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
COMMD2-202ENST00000469896 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
COMMD2-202ENST00000469896 KCNQ2O43526 872 aa17.44■□□□□ 0.38
COMMD2-202ENST00000469896 FAM182BQ5T319 152 aa17.44■□□□□ 0.38
COMMD2-202ENST00000469896 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
COMMD2-202ENST00000469896 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
COMMD2-202ENST00000469896 APBA3O96018 575 aa17.42■□□□□ 0.38
COMMD2-202ENST00000469896 TRIM37O94972 964 aa17.41■□□□□ 0.38
COMMD2-202ENST00000469896 PSME1Q06323 249 aa17.41■□□□□ 0.38
COMMD2-202ENST00000469896 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
COMMD2-202ENST00000469896 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
COMMD2-202ENST00000469896 CABLES1Q8TDN4 633 aa17.41■□□□□ 0.38
COMMD2-202ENST00000469896 NUP155O75694 1391 aa17.4■□□□□ 0.38
COMMD2-202ENST00000469896 TNS3Q68CZ2 1445 aa17.4■□□□□ 0.38
COMMD2-202ENST00000469896 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
COMMD2-202ENST00000469896 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
COMMD2-202ENST00000469896 PLEKHG5O94827 1062 aa17.4■□□□□ 0.38
COMMD2-202ENST00000469896 MKRN4PQ13434 485 aaPredicted RBP17.4■□□□□ 0.38
COMMD2-202ENST00000469896 TNS1Q9HBL0 1735 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms