RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 C14orf37Q86TY3 774 aa13.17□□□□□ -0.3
FN1-216ENST00000469569 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
FN1-216ENST00000469569 METP08581 1390 aa13.17□□□□□ -0.3
FN1-216ENST00000469569 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
FN1-216ENST00000469569 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
FN1-216ENST00000469569 DHX57Q6P158 1386 aaKnown RBP13.16□□□□□ -0.3
FN1-216ENST00000469569 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
FN1-216ENST00000469569 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
FN1-216ENST00000469569 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
FN1-216ENST00000469569 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
FN1-216ENST00000469569 ATF3P18847 181 aa13.15□□□□□ -0.3
FN1-216ENST00000469569 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
FN1-216ENST00000469569 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
FN1-216ENST00000469569 IFT172Q9UG01 1749 aa13.14□□□□□ -0.31
FN1-216ENST00000469569 IFNLR1Q8IU57 520 aaPredicted RBP13.14□□□□□ -0.31
FN1-216ENST00000469569 KDM2AQ9Y2K7 1162 aa13.14□□□□□ -0.31
FN1-216ENST00000469569 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
FN1-216ENST00000469569 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
FN1-216ENST00000469569 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
FN1-216ENST00000469569 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
FN1-216ENST00000469569 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
FN1-216ENST00000469569 PCGF6Q9BYE7 350 aa13.13□□□□□ -0.31
FN1-216ENST00000469569 LAMC1P11047 1609 aa13.13□□□□□ -0.31
FN1-216ENST00000469569 DCCP43146 1447 aa13.13□□□□□ -0.31
FN1-216ENST00000469569 XRN1Q8IZH2 1706 aaKnown RBP13.11□□□□□ -0.31
FN1-216ENST00000469569 TECPR2O15040 1411 aa13.11□□□□□ -0.31
FN1-216ENST00000469569 PLEKHG5O94827 1062 aa13.1□□□□□ -0.31
FN1-216ENST00000469569 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
FN1-216ENST00000469569 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
FN1-216ENST00000469569 CFAP70Q5T0N1 1121 aa13.1□□□□□ -0.31
FN1-216ENST00000469569 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
FN1-216ENST00000469569 FAM135BQ49AJ0 1406 aa13.1□□□□□ -0.31
FN1-216ENST00000469569 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
FN1-216ENST00000469569 YTHDC2Q9H6S0 1430 aaKnown RBP13.09□□□□□ -0.31
FN1-216ENST00000469569 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
FN1-216ENST00000469569 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 TMEM132EQ6IEE7 984 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 STK26Q9P289 416 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.32
FN1-216ENST00000469569 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
FN1-216ENST00000469569 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
FN1-216ENST00000469569 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
FN1-216ENST00000469569 TONSLQ96HA7 1378 aa13.06□□□□□ -0.32
FN1-216ENST00000469569 POGKQ9P215 609 aa13.05□□□□□ -0.32
FN1-216ENST00000469569 DLC1Q96QB1 1528 aa13.03□□□□□ -0.32
FN1-216ENST00000469569 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
FN1-216ENST00000469569 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
FN1-216ENST00000469569 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.32
FN1-216ENST00000469569 KIAA1210Q9ULL0 1709 aa13.02□□□□□ -0.32
FN1-216ENST00000469569 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
FN1-216ENST00000469569 HSPA1LP34931 641 aa13.01□□□□□ -0.33
FN1-216ENST00000469569 WAPLQ7Z5K2 1190 aa13.01□□□□□ -0.33
FN1-216ENST00000469569 PRAM1Q96QH2 718 aa13.01□□□□□ -0.33
FN1-216ENST00000469569 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
FN1-216ENST00000469569 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
FN1-216ENST00000469569 EIF3AQ14152 1382 aaKnown RBP13.01□□□□□ -0.33
FN1-216ENST00000469569 ASXL1Q8IXJ9 1541 aa13.01□□□□□ -0.33
FN1-216ENST00000469569 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
FN1-216ENST00000469569 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
FN1-216ENST00000469569 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
FN1-216ENST00000469569 MST1RQ04912 1400 aa12.98□□□□□ -0.33
FN1-216ENST00000469569 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
FN1-216ENST00000469569 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
FN1-216ENST00000469569 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
FN1-216ENST00000469569 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
FN1-216ENST00000469569 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
FN1-216ENST00000469569 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
FN1-216ENST00000469569 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
FN1-216ENST00000469569 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
FN1-216ENST00000469569 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.34
FN1-216ENST00000469569 ROBO1Q9Y6N7 1651 aa12.96□□□□□ -0.34
FN1-216ENST00000469569 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
FN1-216ENST00000469569 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
FN1-216ENST00000469569 AMER1Q5JTC6 1135 aaPredicted RBP12.95□□□□□ -0.34
FN1-216ENST00000469569 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
FN1-216ENST00000469569 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
FN1-216ENST00000469569 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
FN1-216ENST00000469569 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
FN1-216ENST00000469569 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
FN1-216ENST00000469569 LRRC59Q96AG4 307 aaKnown RBP12.94□□□□□ -0.34
FN1-216ENST00000469569 ANKARQ7Z5J8 1434 aa12.94□□□□□ -0.34
FN1-216ENST00000469569 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
FN1-216ENST00000469569 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
FN1-216ENST00000469569 JCADQ9P266 1359 aa12.93□□□□□ -0.34
FN1-216ENST00000469569 AHDC1Q5TGY3 1603 aaPredicted RBP12.92□□□□□ -0.34
FN1-216ENST00000469569 CARD11Q9BXL7 1154 aa12.92□□□□□ -0.34
FN1-216ENST00000469569 MINK1Q8N4C8 1332 aaPredicted RBP12.91□□□□□ -0.34
FN1-216ENST00000469569 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
FN1-216ENST00000469569 NBPF8Q3BBV2 869 aa12.91□□□□□ -0.34
FN1-216ENST00000469569 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
FN1-216ENST00000469569 PSME1Q06323 249 aa12.9□□□□□ -0.34
FN1-216ENST00000469569 ORAI2Q96SN7 254 aa12.9□□□□□ -0.34
FN1-216ENST00000469569 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
FN1-216ENST00000469569 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
FN1-216ENST00000469569 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
FN1-216ENST00000469569 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
FN1-216ENST00000469569 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms