RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ADGRF5Q8IZF2 1346 aa12.03□□□□□ -0.48
GAPVD1-213ENST00000469498 ARHGEF28Q8N1W1 1705 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-213ENST00000469498 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.48
GAPVD1-213ENST00000469498 DIP2AQ14689 1571 aa12.02□□□□□ -0.49
GAPVD1-213ENST00000469498 PPP1R15AO75807 674 aaPredicted RBP12.02□□□□□ -0.49
GAPVD1-213ENST00000469498 KNDC1Q76NI1 1749 aa12.02□□□□□ -0.49
GAPVD1-213ENST00000469498 HSPA2P54652 639 aa12.01□□□□□ -0.49
GAPVD1-213ENST00000469498 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
GAPVD1-213ENST00000469498 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-213ENST00000469498 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
GAPVD1-213ENST00000469498 GALR2O43603 387 aaPredicted RBP11.99□□□□□ -0.49
GAPVD1-213ENST00000469498 LTKP29376 864 aa11.99□□□□□ -0.49
GAPVD1-213ENST00000469498 TXNDC2Q86VQ3 553 aa11.99□□□□□ -0.49
GAPVD1-213ENST00000469498 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.99□□□□□ -0.49
GAPVD1-213ENST00000469498 EID1Q9Y6B2 187 aa11.99□□□□□ -0.49
GAPVD1-213ENST00000469498 PLEKHG1Q9ULL1 1385 aa11.99□□□□□ -0.49
GAPVD1-213ENST00000469498 STRCP1A6NGW2 1772 aa11.98□□□□□ -0.49
GAPVD1-213ENST00000469498 QRICH2Q9H0J4 1663 aa11.98□□□□□ -0.49
GAPVD1-213ENST00000469498 ADGRB1O14514 1584 aa11.98□□□□□ -0.49
GAPVD1-213ENST00000469498 NPHP4O75161 1426 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-213ENST00000469498 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-213ENST00000469498 XRN1Q8IZH2 1706 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-213ENST00000469498 MED14O60244 1454 aa11.97□□□□□ -0.49
GAPVD1-213ENST00000469498 ADAMTS13Q76LX8 1427 aa11.97□□□□□ -0.49
GAPVD1-213ENST00000469498 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
GAPVD1-213ENST00000469498 ROCK2O75116 1388 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-213ENST00000469498 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
GAPVD1-213ENST00000469498 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-213ENST00000469498 ANKLE2Q86XL3 938 aa11.96□□□□□ -0.49
GAPVD1-213ENST00000469498 BCANQ96GW7 911 aa11.96□□□□□ -0.49
GAPVD1-213ENST00000469498 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
GAPVD1-213ENST00000469498 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
GAPVD1-213ENST00000469498 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
GAPVD1-213ENST00000469498 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
GAPVD1-213ENST00000469498 CPS1P31327 1500 aa11.93□□□□□ -0.5
GAPVD1-213ENST00000469498 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
GAPVD1-213ENST00000469498 SLC26A8Q96RN1 970 aa11.92□□□□□ -0.5
GAPVD1-213ENST00000469498 C14orf93Q9H972 538 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-213ENST00000469498 XIRP1Q702N8 1843 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-213ENST00000469498 GPRASP1Q5JY77 1395 aa11.92□□□□□ -0.5
GAPVD1-213ENST00000469498 NALCNQ8IZF0 1738 aa11.91□□□□□ -0.5
GAPVD1-213ENST00000469498 METP08581 1390 aa11.91□□□□□ -0.5
GAPVD1-213ENST00000469498 TMEM132EQ6IEE7 984 aa11.9□□□□□ -0.5
GAPVD1-213ENST00000469498 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
GAPVD1-213ENST00000469498 YTHDC2Q9H6S0 1430 aaKnown RBP11.9□□□□□ -0.5
GAPVD1-213ENST00000469498 PTPRUQ92729 1446 aa11.89□□□□□ -0.51
GAPVD1-213ENST00000469498 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
GAPVD1-213ENST00000469498 DLC1Q96QB1 1528 aa11.89□□□□□ -0.51
GAPVD1-213ENST00000469498 USP47Q96K76 1375 aa11.89□□□□□ -0.51
GAPVD1-213ENST00000469498 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-213ENST00000469498 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-213ENST00000469498 STK26Q9P289 416 aa11.87□□□□□ -0.51
GAPVD1-213ENST00000469498 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-213ENST00000469498 TBX22Q9Y458 520 aa11.86□□□□□ -0.51
GAPVD1-213ENST00000469498 EIF3AQ14152 1382 aaKnown RBP11.86□□□□□ -0.51
GAPVD1-213ENST00000469498 RGPD8O14715 1765 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-213ENST00000469498 TECPR2O15040 1411 aa11.86□□□□□ -0.51
GAPVD1-213ENST00000469498 PIK3R4Q99570 1358 aa11.85□□□□□ -0.51
GAPVD1-213ENST00000469498 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
GAPVD1-213ENST00000469498 PTCH1Q13635 1447 aa11.85□□□□□ -0.51
GAPVD1-213ENST00000469498 NKTRP30414 1462 aaKnown RBP11.84□□□□□ -0.51
GAPVD1-213ENST00000469498 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
GAPVD1-213ENST00000469498 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-213ENST00000469498 HIRIP3Q9BW71 556 aaPredicted RBP11.83□□□□□ -0.52
GAPVD1-213ENST00000469498 MYOM1P52179 1685 aa11.83□□□□□ -0.52
GAPVD1-213ENST00000469498 FMN2Q9NZ56 1722 aa11.83□□□□□ -0.52
GAPVD1-213ENST00000469498 ABCC11Q96J66 1382 aa11.82□□□□□ -0.52
GAPVD1-213ENST00000469498 ROBO2Q9HCK4 1378 aa11.82□□□□□ -0.52
GAPVD1-213ENST00000469498 EIF4G2P78344 907 aaKnown RBP eCLIP11.82□□□□□ -0.52
GAPVD1-213ENST00000469498 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
GAPVD1-213ENST00000469498 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
GAPVD1-213ENST00000469498 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
GAPVD1-213ENST00000469498 CREBZFQ9NS37 354 aa11.81□□□□□ -0.52
GAPVD1-213ENST00000469498 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
GAPVD1-213ENST00000469498 AMOTL2Q9Y2J4 779 aa11.81□□□□□ -0.52
GAPVD1-213ENST00000469498 FAM135BQ49AJ0 1406 aa11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 KCNA6P17658 529 aa11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 TOPAZ1Q8N9V7 1692 aa11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 ZNF335Q9H4Z2 1342 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
GAPVD1-213ENST00000469498 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
GAPVD1-213ENST00000469498 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
GAPVD1-213ENST00000469498 PRAM1Q96QH2 718 aa11.79□□□□□ -0.52
GAPVD1-213ENST00000469498 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
GAPVD1-213ENST00000469498 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
GAPVD1-213ENST00000469498 C7P10643 843 aa11.78□□□□□ -0.52
GAPVD1-213ENST00000469498 WAPLQ7Z5K2 1190 aa11.78□□□□□ -0.52
GAPVD1-213ENST00000469498 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-213ENST00000469498 POGKQ9P215 609 aa11.78□□□□□ -0.52
GAPVD1-213ENST00000469498 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
GAPVD1-213ENST00000469498 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
GAPVD1-213ENST00000469498 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-213ENST00000469498 DISP3Q9P2K9 1392 aa11.77□□□□□ -0.53
GAPVD1-213ENST00000469498 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
GAPVD1-213ENST00000469498 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-213ENST00000469498 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
GAPVD1-213ENST00000469498 AKAP12Q02952 1782 aa11.76□□□□□ -0.53
GAPVD1-213ENST00000469498 SBNO2Q9Y2G9 1366 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms