RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
NUP50-214ENST00000469163 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
NUP50-214ENST00000469163 BCCIPQ9P287 314 aaKnown RBP eCLIP12.65□□□□□ -0.38
NUP50-214ENST00000469163 SLC52A1Q9NWF4 448 aa12.65□□□□□ -0.38
NUP50-214ENST00000469163 ZMYM3Q14202 1370 aa12.65□□□□□ -0.38
NUP50-214ENST00000469163 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
NUP50-214ENST00000469163 PDE4AP27815 886 aa12.64□□□□□ -0.39
NUP50-214ENST00000469163 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
NUP50-214ENST00000469163 IRX3P78415 501 aaPredicted RBP12.64□□□□□ -0.39
NUP50-214ENST00000469163 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
NUP50-214ENST00000469163 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
NUP50-214ENST00000469163 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
NUP50-214ENST00000469163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
NUP50-214ENST00000469163 DIP2BQ9P265 1576 aa12.63□□□□□ -0.39
NUP50-214ENST00000469163 ABCC1P33527 1531 aa12.63□□□□□ -0.39
NUP50-214ENST00000469163 CDK19Q9BWU1 502 aa12.62□□□□□ -0.39
NUP50-214ENST00000469163 NPATQ14207 1427 aa12.62□□□□□ -0.39
NUP50-214ENST00000469163 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
NUP50-214ENST00000469163 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUP50-214ENST00000469163 AEBP1Q8IUX7 1158 aa12.62□□□□□ -0.39
NUP50-214ENST00000469163 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
NUP50-214ENST00000469163 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
NUP50-214ENST00000469163 LTKP29376 864 aa12.61□□□□□ -0.39
NUP50-214ENST00000469163 CERS3Q8IU89 383 aa12.61□□□□□ -0.39
NUP50-214ENST00000469163 PPRC1Q5VV67 1664 aaKnown RBP12.6□□□□□ -0.39
NUP50-214ENST00000469163 PLA2R1Q13018 1463 aa12.6□□□□□ -0.39
NUP50-214ENST00000469163 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
NUP50-214ENST00000469163 MAP7D2Q96T17 732 aa12.6□□□□□ -0.39
NUP50-214ENST00000469163 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
NUP50-214ENST00000469163 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
NUP50-214ENST00000469163 APPP05067 770 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 ARHGEF5Q12774 1597 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 ESPNB1AK53 854 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 CHRM1P11229 460 aaPredicted RBP12.59□□□□□ -0.39
NUP50-214ENST00000469163 AMOTL2Q9Y2J4 779 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
NUP50-214ENST00000469163 ADGRL2O95490 1459 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 ZBTB22O15209 634 aa12.59□□□□□ -0.39
NUP50-214ENST00000469163 TRIM44Q96DX7 344 aaPredicted RBP12.59□□□□□ -0.39
NUP50-214ENST00000469163 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 THEMISQ8N1K5 641 aaPredicted RBP12.58□□□□□ -0.4
NUP50-214ENST00000469163 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 HMOX1P09601 288 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 RGS22Q8NE09 1264 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 PANK2Q9BZ23 570 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 ARAP3Q8WWN8 1544 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 HDGFL2Q7Z4V5 671 aaPredicted RBP12.58□□□□□ -0.4
NUP50-214ENST00000469163 TEX14Q8IWB6 1497 aa12.58□□□□□ -0.4
NUP50-214ENST00000469163 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
NUP50-214ENST00000469163 DMTNQ08495 405 aa12.57□□□□□ -0.4
NUP50-214ENST00000469163 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
NUP50-214ENST00000469163 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
NUP50-214ENST00000469163 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
NUP50-214ENST00000469163 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
NUP50-214ENST00000469163 GOLGA6L3A6NEY3 463 aa12.56□□□□□ -0.4
NUP50-214ENST00000469163 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
NUP50-214ENST00000469163 DDX17Q92841 729 aaKnown RBP12.56□□□□□ -0.4
NUP50-214ENST00000469163 GLI2P10070 1586 aa12.56□□□□□ -0.4
NUP50-214ENST00000469163 TCERG1O14776 1098 aaKnown RBP12.55□□□□□ -0.4
NUP50-214ENST00000469163 TESK2Q96S53 571 aa12.55□□□□□ -0.4
NUP50-214ENST00000469163 EIF3AQ14152 1382 aaKnown RBP12.55□□□□□ -0.4
NUP50-214ENST00000469163 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
NUP50-214ENST00000469163 ZFYVE16Q7Z3T8 1539 aa12.55□□□□□ -0.4
NUP50-214ENST00000469163 FOXO3O43524 673 aa12.55□□□□□ -0.4
NUP50-214ENST00000469163 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
NUP50-214ENST00000469163 ANKLE2Q86XL3 938 aa12.55□□□□□ -0.4
NUP50-214ENST00000469163 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
NUP50-214ENST00000469163 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
NUP50-214ENST00000469163 RTEL1-TNFRSF6BF6WH68 1400 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 ATP10AO60312 1499 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 MTHFSP49914 203 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 TNRQ92752 1358 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 UTP14CQ5TAP6 766 aaKnown RBP12.54□□□□□ -0.4
NUP50-214ENST00000469163 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 BACH2Q9BYV9 841 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
NUP50-214ENST00000469163 HSP90B1P14625 803 aaKnown RBP12.54□□□□□ -0.4
NUP50-214ENST00000469163 GZF1Q9H116 711 aaPredicted RBP12.54□□□□□ -0.4
NUP50-214ENST00000469163 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
NUP50-214ENST00000469163 PLIN1O60240 522 aa12.53□□□□□ -0.4
NUP50-214ENST00000469163 KCNA6P17658 529 aa12.53□□□□□ -0.4
NUP50-214ENST00000469163 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
NUP50-214ENST00000469163 APAF1O14727 1248 aa12.53□□□□□ -0.4
NUP50-214ENST00000469163 NME9Q86XW9 330 aa12.53□□□□□ -0.4
NUP50-214ENST00000469163 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
NUP50-214ENST00000469163 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
NUP50-214ENST00000469163 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
NUP50-214ENST00000469163 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
NUP50-214ENST00000469163 PIP4K2BP78356 416 aa12.51□□□□□ -0.41
NUP50-214ENST00000469163 PSME1Q06323 249 aa12.51□□□□□ -0.41
NUP50-214ENST00000469163 PRDM15P57071 1507 aaPredicted RBP12.51□□□□□ -0.41
NUP50-214ENST00000469163 NEO1Q92859 1461 aa12.51□□□□□ -0.41
NUP50-214ENST00000469163 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
NUP50-214ENST00000469163 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
NUP50-214ENST00000469163 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
NUP50-214ENST00000469163 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.5□□□□□ -0.41
NUP50-214ENST00000469163 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
NUP50-214ENST00000469163 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
NUP50-214ENST00000469163 NLRP6P59044 892 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms