RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 AGLP35573 1532 aa11.89□□□□□ -0.51
TMEM50B-206ENST00000468874 CAMSAP1Q5T5Y3 1602 aa11.89□□□□□ -0.51
TMEM50B-206ENST00000468874 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
TMEM50B-206ENST00000468874 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
TMEM50B-206ENST00000468874 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
TMEM50B-206ENST00000468874 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
TMEM50B-206ENST00000468874 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
TMEM50B-206ENST00000468874 EPAS1Q99814 870 aa11.88□□□□□ -0.51
TMEM50B-206ENST00000468874 C3P01024 1663 aa11.87□□□□□ -0.51
TMEM50B-206ENST00000468874 TK2O00142 265 aa11.87□□□□□ -0.51
TMEM50B-206ENST00000468874 PTPREP23469 700 aa11.87□□□□□ -0.51
TMEM50B-206ENST00000468874 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
TMEM50B-206ENST00000468874 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
TMEM50B-206ENST00000468874 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
TMEM50B-206ENST00000468874 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
TMEM50B-206ENST00000468874 ADGRD1Q6QNK2 874 aa11.85□□□□□ -0.51
TMEM50B-206ENST00000468874 KCNV2Q8TDN2 545 aa11.85□□□□□ -0.51
TMEM50B-206ENST00000468874 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
TMEM50B-206ENST00000468874 DDX12PQ92771 950 aa11.84□□□□□ -0.51
TMEM50B-206ENST00000468874 KDM5CP41229 1560 aa11.84□□□□□ -0.51
TMEM50B-206ENST00000468874 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
TMEM50B-206ENST00000468874 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
TMEM50B-206ENST00000468874 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
TMEM50B-206ENST00000468874 CPS1P31327 1500 aa11.81□□□□□ -0.52
TMEM50B-206ENST00000468874 DIP2CQ9Y2E4 1556 aa11.81□□□□□ -0.52
TMEM50B-206ENST00000468874 HRO43593 1189 aa11.81□□□□□ -0.52
TMEM50B-206ENST00000468874 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
TMEM50B-206ENST00000468874 VPS9D1Q9Y2B5 631 aa11.79□□□□□ -0.52
TMEM50B-206ENST00000468874 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
TMEM50B-206ENST00000468874 NBR1Q14596 966 aa11.78□□□□□ -0.52
TMEM50B-206ENST00000468874 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
TMEM50B-206ENST00000468874 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
TMEM50B-206ENST00000468874 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
TMEM50B-206ENST00000468874 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
TMEM50B-206ENST00000468874 MROH2AA6NES4 1674 aa11.77□□□□□ -0.53
TMEM50B-206ENST00000468874 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
TMEM50B-206ENST00000468874 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
TMEM50B-206ENST00000468874 MYO5CQ9NQX4 1742 aa11.76□□□□□ -0.53
TMEM50B-206ENST00000468874 SHANK2Q9UPX8 1470 aa11.76□□□□□ -0.53
TMEM50B-206ENST00000468874 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
TMEM50B-206ENST00000468874 COL9A1P20849 921 aa11.75□□□□□ -0.53
TMEM50B-206ENST00000468874 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
TMEM50B-206ENST00000468874 RGS17Q9UGC6 210 aaPredicted RBP11.75□□□□□ -0.53
TMEM50B-206ENST00000468874 OSBPP22059 807 aa11.74□□□□□ -0.53
TMEM50B-206ENST00000468874 RBM33Q96EV2 1170 aaKnown RBP11.74□□□□□ -0.53
TMEM50B-206ENST00000468874 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
TMEM50B-206ENST00000468874 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
TMEM50B-206ENST00000468874 ABCA6Q8N139 1617 aa11.74□□□□□ -0.53
TMEM50B-206ENST00000468874 CLIP1P30622 1438 aa11.73□□□□□ -0.53
TMEM50B-206ENST00000468874 PRIM1P49642 420 aaKnown RBP11.73□□□□□ -0.53
TMEM50B-206ENST00000468874 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
TMEM50B-206ENST00000468874 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
TMEM50B-206ENST00000468874 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
TMEM50B-206ENST00000468874 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
TMEM50B-206ENST00000468874 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
TMEM50B-206ENST00000468874 MAP3K7O43318 606 aa11.71□□□□□ -0.53
TMEM50B-206ENST00000468874 KIF14Q15058 1648 aa11.71□□□□□ -0.54
TMEM50B-206ENST00000468874 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
TMEM50B-206ENST00000468874 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
TMEM50B-206ENST00000468874 MYO3AQ8NEV4 1616 aa11.7□□□□□ -0.54
TMEM50B-206ENST00000468874 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
TMEM50B-206ENST00000468874 ONECUT3O60422 494 aaPredicted RBP11.69□□□□□ -0.54
TMEM50B-206ENST00000468874 THEMISQ8N1K5 641 aaPredicted RBP11.69□□□□□ -0.54
TMEM50B-206ENST00000468874 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
TMEM50B-206ENST00000468874 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
TMEM50B-206ENST00000468874 SUPT6HQ7KZ85 1726 aaKnown RBP11.68□□□□□ -0.54
TMEM50B-206ENST00000468874 PROX2Q3B8N5 592 aa11.67□□□□□ -0.54
TMEM50B-206ENST00000468874 GGT6Q6P531 493 aa11.67□□□□□ -0.54
TMEM50B-206ENST00000468874 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
TMEM50B-206ENST00000468874 SPAG9O60271 1321 aaKnown RBP11.66□□□□□ -0.54
TMEM50B-206ENST00000468874 POTEAQ6S8J7 498 aa11.66□□□□□ -0.54
TMEM50B-206ENST00000468874 KIDINS220Q9ULH0 1771 aa11.66□□□□□ -0.54
TMEM50B-206ENST00000468874 ABCC1P33527 1531 aa11.65□□□□□ -0.54
TMEM50B-206ENST00000468874 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
TMEM50B-206ENST00000468874 ALKQ9UM73 1620 aa11.64□□□□□ -0.55
TMEM50B-206ENST00000468874 MED14O60244 1454 aa11.63□□□□□ -0.55
TMEM50B-206ENST00000468874 EEA1Q15075 1411 aa11.63□□□□□ -0.55
TMEM50B-206ENST00000468874 TRIM6-TRIM34B2RNG4 842 aa11.63□□□□□ -0.55
TMEM50B-206ENST00000468874 SEMA3EO15041 775 aa11.63□□□□□ -0.55
TMEM50B-206ENST00000468874 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
TMEM50B-206ENST00000468874 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
TMEM50B-206ENST00000468874 CLTCQ00610 1675 aaKnown RBP11.62□□□□□ -0.55
TMEM50B-206ENST00000468874 CDC42BPBQ9Y5S2 1711 aa11.62□□□□□ -0.55
TMEM50B-206ENST00000468874 A2MP01023 1474 aa11.62□□□□□ -0.55
TMEM50B-206ENST00000468874 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 KIAA1468Q9P260 1216 aa11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 TNRQ92752 1358 aa11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 SAMD9LQ8IVG5 1584 aa11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 NEURL4Q96JN8 1562 aa11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 ITSN2Q9NZM3 1697 aa11.61□□□□□ -0.55
TMEM50B-206ENST00000468874 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
TMEM50B-206ENST00000468874 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM50B-206ENST00000468874 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
TMEM50B-206ENST00000468874 PRSS12P56730 875 aa11.59□□□□□ -0.55
TMEM50B-206ENST00000468874 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
TMEM50B-206ENST00000468874 PREX2Q70Z35 1606 aa11.59□□□□□ -0.55
TMEM50B-206ENST00000468874 FAM135BQ49AJ0 1406 aa11.59□□□□□ -0.55
TMEM50B-206ENST00000468874 KIAA1107Q9UPP5 1409 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms