RNA–Protein interactions for RNA: ENST00000468753.5

COL4A3-203, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-203ENST00000468753 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-203ENST00000468753 AMOTL2Q9Y2J4 779 aa12.63□□□□□ -0.39
COL4A3-203ENST00000468753 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
COL4A3-203ENST00000468753 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
COL4A3-203ENST00000468753 HSPA1LP34931 641 aa12.61□□□□□ -0.39
COL4A3-203ENST00000468753 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
COL4A3-203ENST00000468753 MSH6P52701 1360 aa12.6□□□□□ -0.39
COL4A3-203ENST00000468753 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
COL4A3-203ENST00000468753 ADGRF5Q8IZF2 1346 aa12.6□□□□□ -0.39
COL4A3-203ENST00000468753 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
COL4A3-203ENST00000468753 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
COL4A3-203ENST00000468753 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-203ENST00000468753 NRXN1Q9ULB1 1477 aa12.57□□□□□ -0.4
COL4A3-203ENST00000468753 PIK3C2GO75747 1445 aa12.56□□□□□ -0.4
COL4A3-203ENST00000468753 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
COL4A3-203ENST00000468753 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
COL4A3-203ENST00000468753 MYOM2P54296 1465 aa12.56□□□□□ -0.4
COL4A3-203ENST00000468753 ROBO1Q9Y6N7 1651 aa12.55□□□□□ -0.4
COL4A3-203ENST00000468753 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
COL4A3-203ENST00000468753 ASXL1Q8IXJ9 1541 aa12.55□□□□□ -0.4
COL4A3-203ENST00000468753 DCCP43146 1447 aa12.54□□□□□ -0.4
COL4A3-203ENST00000468753 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
COL4A3-203ENST00000468753 ADGRL3Q9HAR2 1447 aa12.54□□□□□ -0.4
COL4A3-203ENST00000468753 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
COL4A3-203ENST00000468753 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
COL4A3-203ENST00000468753 NALCNQ8IZF0 1738 aa12.52□□□□□ -0.41
COL4A3-203ENST00000468753 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.41
COL4A3-203ENST00000468753 TECPR2O15040 1411 aa12.52□□□□□ -0.41
COL4A3-203ENST00000468753 ATF3P18847 181 aa12.51□□□□□ -0.41
COL4A3-203ENST00000468753 MST1RQ04912 1400 aa12.51□□□□□ -0.41
COL4A3-203ENST00000468753 C14orf93Q9H972 538 aaKnown RBP12.5□□□□□ -0.41
COL4A3-203ENST00000468753 DHX57Q6P158 1386 aaKnown RBP12.5□□□□□ -0.41
COL4A3-203ENST00000468753 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
COL4A3-203ENST00000468753 LAMC1P11047 1609 aa12.5□□□□□ -0.41
COL4A3-203ENST00000468753 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
COL4A3-203ENST00000468753 MED1Q15648 1581 aaPredicted RBP12.49□□□□□ -0.41
COL4A3-203ENST00000468753 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
COL4A3-203ENST00000468753 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
COL4A3-203ENST00000468753 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
COL4A3-203ENST00000468753 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
COL4A3-203ENST00000468753 AHDC1Q5TGY3 1603 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-203ENST00000468753 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
COL4A3-203ENST00000468753 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-203ENST00000468753 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
COL4A3-203ENST00000468753 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 STAC3Q96MF2 364 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 STK26Q9P289 416 aa12.46□□□□□ -0.41
COL4A3-203ENST00000468753 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.42
COL4A3-203ENST00000468753 PLEKHH1Q9ULM0 1364 aa12.45□□□□□ -0.42
COL4A3-203ENST00000468753 CDC42BPGQ6DT37 1551 aa12.45□□□□□ -0.42
COL4A3-203ENST00000468753 SIRT1Q96EB6 747 aa12.45□□□□□ -0.42
COL4A3-203ENST00000468753 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-203ENST00000468753 WAPLQ7Z5K2 1190 aa12.44□□□□□ -0.42
COL4A3-203ENST00000468753 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
COL4A3-203ENST00000468753 DLC1Q96QB1 1528 aa12.43□□□□□ -0.42
COL4A3-203ENST00000468753 NHSL1Q5SYE7 1610 aa12.43□□□□□ -0.42
COL4A3-203ENST00000468753 JCADQ9P266 1359 aa12.42□□□□□ -0.42
COL4A3-203ENST00000468753 ILDR2Q71H61 639 aa12.41□□□□□ -0.42
COL4A3-203ENST00000468753 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
COL4A3-203ENST00000468753 FMN2Q9NZ56 1722 aa12.39□□□□□ -0.43
COL4A3-203ENST00000468753 SHPRHQ149N8 1683 aa12.38□□□□□ -0.43
COL4A3-203ENST00000468753 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
COL4A3-203ENST00000468753 DDX17Q92841 729 aaKnown RBP12.38□□□□□ -0.43
COL4A3-203ENST00000468753 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
COL4A3-203ENST00000468753 SIN3AQ96ST3 1273 aa12.38□□□□□ -0.43
COL4A3-203ENST00000468753 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
COL4A3-203ENST00000468753 ADGRB2O60241 1585 aa12.36□□□□□ -0.43
COL4A3-203ENST00000468753 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
COL4A3-203ENST00000468753 L3MBTL2Q969R5 705 aa12.36□□□□□ -0.43
COL4A3-203ENST00000468753 LRP6O75581 1613 aa12.36□□□□□ -0.43
COL4A3-203ENST00000468753 SOS2Q07890 1332 aaPredicted RBP12.36□□□□□ -0.43
COL4A3-203ENST00000468753 SPATA31A6Q5VVP1 1343 aa12.36□□□□□ -0.43
COL4A3-203ENST00000468753 ARHGEF28Q8N1W1 1705 aaKnown RBP12.35□□□□□ -0.43
COL4A3-203ENST00000468753 CLCN6P51797 869 aa12.35□□□□□ -0.43
COL4A3-203ENST00000468753 SAFB2Q14151 953 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL4A3-203ENST00000468753 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
COL4A3-203ENST00000468753 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
COL4A3-203ENST00000468753 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
COL4A3-203ENST00000468753 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
COL4A3-203ENST00000468753 POGKQ9P215 609 aa12.34□□□□□ -0.43
COL4A3-203ENST00000468753 PXDNQ92626 1479 aa12.34□□□□□ -0.43
COL4A3-203ENST00000468753 NUTM2FA1L443 756 aa12.33□□□□□ -0.44
COL4A3-203ENST00000468753 ESCO1Q5FWF5 840 aa12.33□□□□□ -0.44
COL4A3-203ENST00000468753 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
COL4A3-203ENST00000468753 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
COL4A3-203ENST00000468753 NEUROD1Q13562 356 aa12.32□□□□□ -0.44
COL4A3-203ENST00000468753 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
COL4A3-203ENST00000468753 KIF1AQ12756 1690 aa12.32□□□□□ -0.44
COL4A3-203ENST00000468753 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-203ENST00000468753 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
COL4A3-203ENST00000468753 MINK1Q8N4C8 1332 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-203ENST00000468753 FOXO3O43524 673 aa12.3□□□□□ -0.44
COL4A3-203ENST00000468753 HIRIP3Q9BW71 556 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-203ENST00000468753 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
COL4A3-203ENST00000468753 TRPM1Q7Z4N2 1603 aa12.29□□□□□ -0.44
COL4A3-203ENST00000468753 WASLO00401 505 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms