RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
TMEM254-209ENST00000467529 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
TMEM254-209ENST00000467529 METP08581 1390 aa12.1□□□□□ -0.47
TMEM254-209ENST00000467529 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
TMEM254-209ENST00000467529 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
TMEM254-209ENST00000467529 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
TMEM254-209ENST00000467529 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
TMEM254-209ENST00000467529 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.48
TMEM254-209ENST00000467529 LTKP29376 864 aa12.08□□□□□ -0.48
TMEM254-209ENST00000467529 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
TMEM254-209ENST00000467529 BCANQ96GW7 911 aa12.08□□□□□ -0.48
TMEM254-209ENST00000467529 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
TMEM254-209ENST00000467529 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
TMEM254-209ENST00000467529 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
TMEM254-209ENST00000467529 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
TMEM254-209ENST00000467529 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
TMEM254-209ENST00000467529 CDK19Q9BWU1 502 aa12.07□□□□□ -0.48
TMEM254-209ENST00000467529 INSRP06213 1382 aa12.06□□□□□ -0.48
TMEM254-209ENST00000467529 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
TMEM254-209ENST00000467529 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
TMEM254-209ENST00000467529 ADAMTS13Q76LX8 1427 aa12.06□□□□□ -0.48
TMEM254-209ENST00000467529 TXNDC2Q86VQ3 553 aa12.06□□□□□ -0.48
TMEM254-209ENST00000467529 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
TMEM254-209ENST00000467529 SLIT1O75093 1534 aa12.06□□□□□ -0.48
TMEM254-209ENST00000467529 ARHGAP23Q9P227 1491 aa12.05□□□□□ -0.48
TMEM254-209ENST00000467529 FKBP8Q14318 412 aa12.05□□□□□ -0.48
TMEM254-209ENST00000467529 TECPR2O15040 1411 aa12.05□□□□□ -0.48
TMEM254-209ENST00000467529 BLMP54132 1417 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-209ENST00000467529 SIRT1Q96EB6 747 aa12.05□□□□□ -0.48
TMEM254-209ENST00000467529 CPS1P31327 1500 aa12.04□□□□□ -0.48
TMEM254-209ENST00000467529 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
TMEM254-209ENST00000467529 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
TMEM254-209ENST00000467529 A0A1W2PP64 1363 aa12.04□□□□□ -0.48
TMEM254-209ENST00000467529 FAM135BQ49AJ0 1406 aa12.04□□□□□ -0.48
TMEM254-209ENST00000467529 NEFLP07196 543 aa12.03□□□□□ -0.48
TMEM254-209ENST00000467529 MORC1Q86VD1 984 aa12.03□□□□□ -0.48
TMEM254-209ENST00000467529 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-209ENST00000467529 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
TMEM254-209ENST00000467529 ADAMTS8Q9UP79 889 aa12.03□□□□□ -0.48
TMEM254-209ENST00000467529 MED14O60244 1454 aa12.03□□□□□ -0.48
TMEM254-209ENST00000467529 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
TMEM254-209ENST00000467529 ADAMTSL3P82987 1691 aa12.02□□□□□ -0.48
TMEM254-209ENST00000467529 WDR43Q15061 677 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM254-209ENST00000467529 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
TMEM254-209ENST00000467529 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
TMEM254-209ENST00000467529 NSD2O96028 1365 aa12.01□□□□□ -0.49
TMEM254-209ENST00000467529 SLC26A8Q96RN1 970 aa12.01□□□□□ -0.49
TMEM254-209ENST00000467529 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
TMEM254-209ENST00000467529 ROBO2Q9HCK4 1378 aa12□□□□□ -0.49
TMEM254-209ENST00000467529 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
TMEM254-209ENST00000467529 CABP1Q9NZU7 370 aa12□□□□□ -0.49
TMEM254-209ENST00000467529 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
TMEM254-209ENST00000467529 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
TMEM254-209ENST00000467529 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
TMEM254-209ENST00000467529 PTPRUQ92729 1446 aa11.99□□□□□ -0.49
TMEM254-209ENST00000467529 POLR3AO14802 1390 aaPredicted RBP11.99□□□□□ -0.49
TMEM254-209ENST00000467529 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
TMEM254-209ENST00000467529 ATP7BP35670 1465 aa11.98□□□□□ -0.49
TMEM254-209ENST00000467529 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
TMEM254-209ENST00000467529 ANKRD26Q9UPS8 1709 aa11.97□□□□□ -0.49
TMEM254-209ENST00000467529 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
TMEM254-209ENST00000467529 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
TMEM254-209ENST00000467529 FYB1O15117 783 aa11.96□□□□□ -0.49
TMEM254-209ENST00000467529 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.49
TMEM254-209ENST00000467529 SHPRHQ149N8 1683 aa11.96□□□□□ -0.49
TMEM254-209ENST00000467529 ADGRB2O60241 1585 aa11.96□□□□□ -0.5
TMEM254-209ENST00000467529 PPIP5K1Q6PFW1 1433 aa11.96□□□□□ -0.5
TMEM254-209ENST00000467529 KIF20BQ96Q89 1820 aa11.96□□□□□ -0.5
TMEM254-209ENST00000467529 MTHFSP49914 203 aa11.96□□□□□ -0.5
TMEM254-209ENST00000467529 NUDT16Q96DE0 195 aaKnown RBP11.96□□□□□ -0.5
TMEM254-209ENST00000467529 AMOTL2Q9Y2J4 779 aa11.96□□□□□ -0.5
TMEM254-209ENST00000467529 ZNF142P52746 1687 aaPredicted RBP11.96□□□□□ -0.5
TMEM254-209ENST00000467529 IRX6P78412 446 aaPredicted RBP11.95□□□□□ -0.5
TMEM254-209ENST00000467529 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
TMEM254-209ENST00000467529 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
TMEM254-209ENST00000467529 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
TMEM254-209ENST00000467529 PRR36Q9H6K5 1346 aa11.93□□□□□ -0.5
TMEM254-209ENST00000467529 NCKAP5LQ9HCH0 1330 aa11.93□□□□□ -0.5
TMEM254-209ENST00000467529 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
TMEM254-209ENST00000467529 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
TMEM254-209ENST00000467529 PTCH1Q13635 1447 aa11.93□□□□□ -0.5
TMEM254-209ENST00000467529 XRN1Q8IZH2 1706 aaKnown RBP11.92□□□□□ -0.5
TMEM254-209ENST00000467529 CFAP53Q96M91 514 aa11.92□□□□□ -0.5
TMEM254-209ENST00000467529 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
TMEM254-209ENST00000467529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM254-209ENST00000467529 AKAP12Q02952 1782 aa11.91□□□□□ -0.5
TMEM254-209ENST00000467529 ANKLE2Q86XL3 938 aa11.91□□□□□ -0.5
TMEM254-209ENST00000467529 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
TMEM254-209ENST00000467529 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
TMEM254-209ENST00000467529 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
TMEM254-209ENST00000467529 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
TMEM254-209ENST00000467529 APAF1O14727 1248 aa11.9□□□□□ -0.5
TMEM254-209ENST00000467529 TOPAZ1Q8N9V7 1692 aa11.9□□□□□ -0.5
TMEM254-209ENST00000467529 PIK3R4Q99570 1358 aa11.9□□□□□ -0.5
TMEM254-209ENST00000467529 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
TMEM254-209ENST00000467529 ZNF521Q96K83 1311 aa11.9□□□□□ -0.51
TMEM254-209ENST00000467529 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
TMEM254-209ENST00000467529 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
TMEM254-209ENST00000467529 NUTM2FA1L443 756 aa11.88□□□□□ -0.51
TMEM254-209ENST00000467529 KCNA6P17658 529 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms