RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
MSH5-212ENST00000467319 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
MSH5-212ENST00000467319 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
MSH5-212ENST00000467319 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
MSH5-212ENST00000467319 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
MSH5-212ENST00000467319 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
MSH5-212ENST00000467319 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
MSH5-212ENST00000467319 ROCK2O75116 1388 aaKnown RBP15.87■□□□□ 0.13
MSH5-212ENST00000467319 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
MSH5-212ENST00000467319 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
MSH5-212ENST00000467319 C1orf167Q5SNV9 1468 aa15.86■□□□□ 0.13
MSH5-212ENST00000467319 ATF3P18847 181 aa15.86■□□□□ 0.13
MSH5-212ENST00000467319 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
MSH5-212ENST00000467319 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
MSH5-212ENST00000467319 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
MSH5-212ENST00000467319 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
MSH5-212ENST00000467319 USP32Q8NFA0 1604 aa15.85■□□□□ 0.13
MSH5-212ENST00000467319 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.13
MSH5-212ENST00000467319 TULP4Q9NRJ4 1543 aa15.83■□□□□ 0.12
MSH5-212ENST00000467319 ANKARQ7Z5J8 1434 aa15.82■□□□□ 0.12
MSH5-212ENST00000467319 KIF1AQ12756 1690 aa15.81■□□□□ 0.12
MSH5-212ENST00000467319 TOPAZ1Q8N9V7 1692 aa15.8■□□□□ 0.12
MSH5-212ENST00000467319 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
MSH5-212ENST00000467319 BRINP3Q76B58 766 aa15.8■□□□□ 0.12
MSH5-212ENST00000467319 POGKQ9P215 609 aa15.8■□□□□ 0.12
MSH5-212ENST00000467319 PHLPP1O60346 1717 aa15.8■□□□□ 0.12
MSH5-212ENST00000467319 ATP7BP35670 1465 aa15.79■□□□□ 0.12
MSH5-212ENST00000467319 EIF3AQ14152 1382 aaKnown RBP15.79■□□□□ 0.12
MSH5-212ENST00000467319 SBNO2Q9Y2G9 1366 aa15.79■□□□□ 0.12
MSH5-212ENST00000467319 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
MSH5-212ENST00000467319 CENPJQ9HC77 1338 aaPredicted RBP15.78■□□□□ 0.12
MSH5-212ENST00000467319 HSPA1LP34931 641 aa15.78■□□□□ 0.12
MSH5-212ENST00000467319 MINK1Q8N4C8 1332 aaPredicted RBP15.77■□□□□ 0.12
MSH5-212ENST00000467319 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.11
MSH5-212ENST00000467319 ITSN1Q15811 1721 aa15.77■□□□□ 0.11
MSH5-212ENST00000467319 CARD11Q9BXL7 1154 aa15.75■□□□□ 0.11
MSH5-212ENST00000467319 PXDNQ92626 1479 aa15.75■□□□□ 0.11
MSH5-212ENST00000467319 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
MSH5-212ENST00000467319 WASLO00401 505 aaPredicted RBP15.74■□□□□ 0.11
MSH5-212ENST00000467319 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
MSH5-212ENST00000467319 SHPRHQ149N8 1683 aa15.73■□□□□ 0.11
MSH5-212ENST00000467319 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
MSH5-212ENST00000467319 USP47Q96K76 1375 aa15.72■□□□□ 0.11
MSH5-212ENST00000467319 TRPM3Q9HCF6 1732 aaPredicted RBP15.69■□□□□ 0.1
MSH5-212ENST00000467319 NUTM2FA1L443 756 aa15.69■□□□□ 0.1
MSH5-212ENST00000467319 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
MSH5-212ENST00000467319 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
MSH5-212ENST00000467319 ESCO1Q5FWF5 840 aa15.68■□□□□ 0.1
MSH5-212ENST00000467319 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
MSH5-212ENST00000467319 MED1Q15648 1581 aaPredicted RBP15.67■□□□□ 0.1
MSH5-212ENST00000467319 DDX17Q92841 729 aaKnown RBP15.67■□□□□ 0.1
MSH5-212ENST00000467319 TESK2Q96S53 571 aa15.67■□□□□ 0.1
MSH5-212ENST00000467319 CDK19Q9BWU1 502 aa15.67■□□□□ 0.1
MSH5-212ENST00000467319 JCADQ9P266 1359 aa15.66■□□□□ 0.1
MSH5-212ENST00000467319 POLR3AO14802 1390 aaPredicted RBP15.65■□□□□ 0.1
MSH5-212ENST00000467319 NUDT16Q96DE0 195 aaKnown RBP15.65■□□□□ 0.1
MSH5-212ENST00000467319 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
MSH5-212ENST00000467319 EVC2Q86UK5 1308 aa15.65■□□□□ 0.1
MSH5-212ENST00000467319 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
MSH5-212ENST00000467319 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
MSH5-212ENST00000467319 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
MSH5-212ENST00000467319 ST20-MTHFSA0A0A6YYL1 179 aa15.63■□□□□ 0.09
MSH5-212ENST00000467319 ATAD2Q6PL18 1390 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 NRKQ7Z2Y5 1582 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 TNS3Q68CZ2 1445 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 LRP6O75581 1613 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 FOXO3O43524 673 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 ABCA3Q99758 1704 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
MSH5-212ENST00000467319 SRPK2P78362 688 aaKnown RBP15.61■□□□□ 0.09
MSH5-212ENST00000467319 CABP2Q9NPB3 220 aa15.61■□□□□ 0.09
MSH5-212ENST00000467319 AKAP12Q02952 1782 aa15.61■□□□□ 0.09
MSH5-212ENST00000467319 DISP3Q9P2K9 1392 aa15.61■□□□□ 0.09
MSH5-212ENST00000467319 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
MSH5-212ENST00000467319 PLEKHG3A1L390 1219 aa15.6■□□□□ 0.09
MSH5-212ENST00000467319 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
MSH5-212ENST00000467319 PMFBP1Q8TBY8 1022 aa15.59■□□□□ 0.09
MSH5-212ENST00000467319 LRRC59Q96AG4 307 aaKnown RBP15.59■□□□□ 0.09
MSH5-212ENST00000467319 MYOM1P52179 1685 aa15.59■□□□□ 0.09
MSH5-212ENST00000467319 SPATA31A6Q5VVP1 1343 aa15.59■□□□□ 0.09
MSH5-212ENST00000467319 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
MSH5-212ENST00000467319 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
MSH5-212ENST00000467319 PUS7Q96PZ0 661 aaKnown RBP15.58■□□□□ 0.08
MSH5-212ENST00000467319 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
MSH5-212ENST00000467319 CPSF1Q10570 1443 aaKnown RBP15.58■□□□□ 0.08
MSH5-212ENST00000467319 USP6P35125 1406 aa15.57■□□□□ 0.08
MSH5-212ENST00000467319 SSH2Q76I76 1423 aa15.57■□□□□ 0.08
MSH5-212ENST00000467319 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
MSH5-212ENST00000467319 KRT28Q7Z3Y7 464 aa15.56■□□□□ 0.08
MSH5-212ENST00000467319 ACEP12821 1306 aa15.56■□□□□ 0.08
MSH5-212ENST00000467319 NINLQ9Y2I6 1382 aa15.56■□□□□ 0.08
MSH5-212ENST00000467319 ARHGEF10O15013 1369 aa15.55■□□□□ 0.08
MSH5-212ENST00000467319 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
MSH5-212ENST00000467319 PIK3C2AO00443 1686 aa15.54■□□□□ 0.08
MSH5-212ENST00000467319 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.08
MSH5-212ENST00000467319 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
MSH5-212ENST00000467319 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
MSH5-212ENST00000467319 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
MSH5-212ENST00000467319 HSPA5P11021 654 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms