RNA–Protein interactions for RNA: ENST00000466490.6

SRPRB-201, Transcript of SRP receptor subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRPRB, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-201ENST00000466490 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
SRPRB-201ENST00000466490 DDIT3P35638 169 aa17.01■□□□□ 0.31
SRPRB-201ENST00000466490 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
SRPRB-201ENST00000466490 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
SRPRB-201ENST00000466490 CEP152O94986 1710 aa17■□□□□ 0.31
SRPRB-201ENST00000466490 DUOX2Q9NRD8 1548 aa17■□□□□ 0.31
SRPRB-201ENST00000466490 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
SRPRB-201ENST00000466490 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
SRPRB-201ENST00000466490 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
SRPRB-201ENST00000466490 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
SRPRB-201ENST00000466490 SKOR2Q2VWA4 1001 aaPredicted RBP16.99■□□□□ 0.31
SRPRB-201ENST00000466490 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
SRPRB-201ENST00000466490 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
SRPRB-201ENST00000466490 PTMSP20962 102 aa16.98■□□□□ 0.31
SRPRB-201ENST00000466490 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
SRPRB-201ENST00000466490 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
SRPRB-201ENST00000466490 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
SRPRB-201ENST00000466490 SNX21Q969T3 373 aa16.97■□□□□ 0.31
SRPRB-201ENST00000466490 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
SRPRB-201ENST00000466490 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
SRPRB-201ENST00000466490 GBP4Q96PP9 640 aa16.97■□□□□ 0.31
SRPRB-201ENST00000466490 KANK1Q14678 1352 aa16.96■□□□□ 0.31
SRPRB-201ENST00000466490 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
SRPRB-201ENST00000466490 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
SRPRB-201ENST00000466490 GAS2L3Q86XJ1 694 aa16.96■□□□□ 0.3
SRPRB-201ENST00000466490 SMC5Q8IY18 1101 aa16.96■□□□□ 0.3
SRPRB-201ENST00000466490 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
SRPRB-201ENST00000466490 SHROOM2Q13796 1616 aa16.95■□□□□ 0.3
SRPRB-201ENST00000466490 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
SRPRB-201ENST00000466490 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
SRPRB-201ENST00000466490 CARD14Q9BXL6 1004 aa16.94■□□□□ 0.3
SRPRB-201ENST00000466490 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
SRPRB-201ENST00000466490 CCDC173Q0VFZ6 552 aa16.93■□□□□ 0.3
SRPRB-201ENST00000466490 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
SRPRB-201ENST00000466490 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
SRPRB-201ENST00000466490 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
SRPRB-201ENST00000466490 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
SRPRB-201ENST00000466490 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
SRPRB-201ENST00000466490 ZKSCAN2Q63HK3 967 aa16.92■□□□□ 0.3
SRPRB-201ENST00000466490 PPP1R9BQ96SB3 815 aa16.92■□□□□ 0.3
SRPRB-201ENST00000466490 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
SRPRB-201ENST00000466490 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
SRPRB-201ENST00000466490 TRPM2O94759 1503 aa16.91■□□□□ 0.3
SRPRB-201ENST00000466490 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
SRPRB-201ENST00000466490 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
SRPRB-201ENST00000466490 ARHGAP5Q13017 1502 aa16.91■□□□□ 0.3
SRPRB-201ENST00000466490 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
SRPRB-201ENST00000466490 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
SRPRB-201ENST00000466490 TERF1P54274 439 aa16.9■□□□□ 0.3
SRPRB-201ENST00000466490 ZSCAN30Q86W11 494 aa16.9■□□□□ 0.3
SRPRB-201ENST00000466490 OFD1O75665 1012 aa16.88■□□□□ 0.29
SRPRB-201ENST00000466490 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
SRPRB-201ENST00000466490 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
SRPRB-201ENST00000466490 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
SRPRB-201ENST00000466490 ANP32BQ92688 251 aaKnown RBP16.87■□□□□ 0.29
SRPRB-201ENST00000466490 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
SRPRB-201ENST00000466490 NASPP49321 788 aaPredicted RBP16.86■□□□□ 0.29
SRPRB-201ENST00000466490 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
SRPRB-201ENST00000466490 CLTCL1P53675 1640 aa16.86■□□□□ 0.29
SRPRB-201ENST00000466490 PTPRTO14522 1441 aa16.86■□□□□ 0.29
SRPRB-201ENST00000466490 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
SRPRB-201ENST00000466490 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
SRPRB-201ENST00000466490 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
SRPRB-201ENST00000466490 CLEC17AQ6ZS10 378 aa16.84■□□□□ 0.29
SRPRB-201ENST00000466490 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.29
SRPRB-201ENST00000466490 MAP7D2Q96T17 732 aa16.83■□□□□ 0.28
SRPRB-201ENST00000466490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.83■□□□□ 0.28
SRPRB-201ENST00000466490 ZNF518AQ6AHZ1 1483 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 HS1BP3Q53T59 392 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 SBNO2Q9Y2G9 1366 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 NEURL4Q96JN8 1562 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 TRIM27P14373 513 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
SRPRB-201ENST00000466490 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
SRPRB-201ENST00000466490 NUCB1Q02818 461 aa16.81■□□□□ 0.28
SRPRB-201ENST00000466490 ITPRIPQ8IWB1 547 aa16.81■□□□□ 0.28
SRPRB-201ENST00000466490 KIF2CQ99661 725 aa16.81■□□□□ 0.28
SRPRB-201ENST00000466490 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
SRPRB-201ENST00000466490 ADGRL1O94910 1474 aa16.81■□□□□ 0.28
SRPRB-201ENST00000466490 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
SRPRB-201ENST00000466490 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
SRPRB-201ENST00000466490 RIPK4P57078 832 aa16.8■□□□□ 0.28
SRPRB-201ENST00000466490 ATF7IPQ6VMQ6 1270 aa16.8■□□□□ 0.28
SRPRB-201ENST00000466490 MAP3K4Q9Y6R4 1608 aa16.8■□□□□ 0.28
SRPRB-201ENST00000466490 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
SRPRB-201ENST00000466490 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
SRPRB-201ENST00000466490 BMP2KLQ5H9B9 411 aa16.79■□□□□ 0.28
SRPRB-201ENST00000466490 ABCA6Q8N139 1617 aa16.79■□□□□ 0.28
SRPRB-201ENST00000466490 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
SRPRB-201ENST00000466490 ZBTB40Q9NUA8 1239 aa16.78■□□□□ 0.28
SRPRB-201ENST00000466490 MYOM2P54296 1465 aa16.78■□□□□ 0.28
SRPRB-201ENST00000466490 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
SRPRB-201ENST00000466490 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
SRPRB-201ENST00000466490 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
SRPRB-201ENST00000466490 MTHFSP49914 203 aa16.78■□□□□ 0.28
SRPRB-201ENST00000466490 ZNF445P59923 1031 aa16.78■□□□□ 0.28
SRPRB-201ENST00000466490 KIF16BQ96L93 1317 aa16.77■□□□□ 0.27
SRPRB-201ENST00000466490 SSFA2P28290 1259 aa16.77■□□□□ 0.27
SRPRB-201ENST00000466490 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms