RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.49
UBE4B-206ENST00000466379 NRXN3Q9Y4C0 1643 aa18.13■□□□□ 0.49
UBE4B-206ENST00000466379 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
UBE4B-206ENST00000466379 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
UBE4B-206ENST00000466379 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
UBE4B-206ENST00000466379 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
UBE4B-206ENST00000466379 PUS7Q96PZ0 661 aaKnown RBP18.11■□□□□ 0.49
UBE4B-206ENST00000466379 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
UBE4B-206ENST00000466379 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
UBE4B-206ENST00000466379 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
UBE4B-206ENST00000466379 MORC1Q86VD1 984 aa18.09■□□□□ 0.49
UBE4B-206ENST00000466379 INSRP06213 1382 aa18.09■□□□□ 0.49
UBE4B-206ENST00000466379 METP08581 1390 aa18.09■□□□□ 0.49
UBE4B-206ENST00000466379 USP32Q8NFA0 1604 aa18.08■□□□□ 0.48
UBE4B-206ENST00000466379 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
UBE4B-206ENST00000466379 TMEM2Q9UHN6 1383 aa18.07■□□□□ 0.48
UBE4B-206ENST00000466379 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
UBE4B-206ENST00000466379 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
UBE4B-206ENST00000466379 C3P01024 1663 aa18.07■□□□□ 0.48
UBE4B-206ENST00000466379 CGNL1Q0VF96 1302 aa18.07■□□□□ 0.48
UBE4B-206ENST00000466379 FER1L4A9Z1Z3 1794 aa18.06■□□□□ 0.48
UBE4B-206ENST00000466379 DLC1Q96QB1 1528 aa18.06■□□□□ 0.48
UBE4B-206ENST00000466379 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
UBE4B-206ENST00000466379 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
UBE4B-206ENST00000466379 TXNDC2Q86VQ3 553 aa18.04■□□□□ 0.48
UBE4B-206ENST00000466379 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
UBE4B-206ENST00000466379 PELP1Q8IZL8 1130 aaKnown RBP18.03■□□□□ 0.48
UBE4B-206ENST00000466379 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
UBE4B-206ENST00000466379 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
UBE4B-206ENST00000466379 NINLQ9Y2I6 1382 aa18.02■□□□□ 0.48
UBE4B-206ENST00000466379 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
UBE4B-206ENST00000466379 LTKP29376 864 aa18.02■□□□□ 0.47
UBE4B-206ENST00000466379 PDE3BQ13370 1112 aa18.01■□□□□ 0.47
UBE4B-206ENST00000466379 NLRP1Q9C000 1473 aa18.01■□□□□ 0.47
UBE4B-206ENST00000466379 CABP1Q9NZU7 370 aa18.01■□□□□ 0.47
UBE4B-206ENST00000466379 POLR3AO14802 1390 aaPredicted RBP18■□□□□ 0.47
UBE4B-206ENST00000466379 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
UBE4B-206ENST00000466379 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
UBE4B-206ENST00000466379 TERF2IPQ9NYB0 399 aa17.99■□□□□ 0.47
UBE4B-206ENST00000466379 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
UBE4B-206ENST00000466379 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
UBE4B-206ENST00000466379 MTHFSP49914 203 aa17.98■□□□□ 0.47
UBE4B-206ENST00000466379 KNDC1Q76NI1 1749 aa17.98■□□□□ 0.47
UBE4B-206ENST00000466379 NSD2O96028 1365 aa17.98■□□□□ 0.47
UBE4B-206ENST00000466379 ERICH6BQ5W0A0 696 aa17.97■□□□□ 0.47
UBE4B-206ENST00000466379 PPP4R2Q9NY27 417 aa17.97■□□□□ 0.47
UBE4B-206ENST00000466379 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
UBE4B-206ENST00000466379 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
UBE4B-206ENST00000466379 APAF1O14727 1248 aa17.96■□□□□ 0.47
UBE4B-206ENST00000466379 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
UBE4B-206ENST00000466379 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
UBE4B-206ENST00000466379 CPS1P31327 1500 aa17.95■□□□□ 0.46
UBE4B-206ENST00000466379 WASLO00401 505 aaPredicted RBP17.95■□□□□ 0.46
UBE4B-206ENST00000466379 TECPR2O15040 1411 aa17.94■□□□□ 0.46
UBE4B-206ENST00000466379 FYB1O15117 783 aa17.94■□□□□ 0.46
UBE4B-206ENST00000466379 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
UBE4B-206ENST00000466379 ROBO2Q9HCK4 1378 aa17.94■□□□□ 0.46
UBE4B-206ENST00000466379 ZNF521Q96K83 1311 aa17.93■□□□□ 0.46
UBE4B-206ENST00000466379 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
UBE4B-206ENST00000466379 FAM135BQ49AJ0 1406 aa17.93■□□□□ 0.46
UBE4B-206ENST00000466379 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
UBE4B-206ENST00000466379 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
UBE4B-206ENST00000466379 RRP1P56182 461 aaKnown RBP17.92■□□□□ 0.46
UBE4B-206ENST00000466379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.92■□□□□ 0.46
UBE4B-206ENST00000466379 TSHZ2Q9NRE2 1034 aa17.92■□□□□ 0.46
UBE4B-206ENST00000466379 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
UBE4B-206ENST00000466379 SLIT1O75093 1534 aa17.91■□□□□ 0.46
UBE4B-206ENST00000466379 PPIP5K1Q6PFW1 1433 aa17.91■□□□□ 0.46
UBE4B-206ENST00000466379 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
UBE4B-206ENST00000466379 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
UBE4B-206ENST00000466379 RIMS1Q86UR5 1692 aaKnown RBP17.9■□□□□ 0.46
UBE4B-206ENST00000466379 PTPRUQ92729 1446 aa17.9■□□□□ 0.46
UBE4B-206ENST00000466379 ATP7BP35670 1465 aa17.9■□□□□ 0.46
UBE4B-206ENST00000466379 GOLGA2Q08379 1002 aa17.89■□□□□ 0.46
UBE4B-206ENST00000466379 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.46
UBE4B-206ENST00000466379 SIRT1Q96EB6 747 aa17.89■□□□□ 0.46
UBE4B-206ENST00000466379 MED14O60244 1454 aa17.89■□□□□ 0.45
UBE4B-206ENST00000466379 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.88■□□□□ 0.45
UBE4B-206ENST00000466379 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
UBE4B-206ENST00000466379 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
UBE4B-206ENST00000466379 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
UBE4B-206ENST00000466379 PRR36Q9H6K5 1346 aa17.86■□□□□ 0.45
UBE4B-206ENST00000466379 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
UBE4B-206ENST00000466379 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
UBE4B-206ENST00000466379 FBLN1P23142 703 aa17.86■□□□□ 0.45
UBE4B-206ENST00000466379 NEUROD2Q15784 382 aa17.86■□□□□ 0.45
UBE4B-206ENST00000466379 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
UBE4B-206ENST00000466379 PLIN1O60240 522 aa17.85■□□□□ 0.45
UBE4B-206ENST00000466379 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
UBE4B-206ENST00000466379 CPSF1Q10570 1443 aaKnown RBP17.85■□□□□ 0.45
UBE4B-206ENST00000466379 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
UBE4B-206ENST00000466379 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
UBE4B-206ENST00000466379 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
UBE4B-206ENST00000466379 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
UBE4B-206ENST00000466379 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
UBE4B-206ENST00000466379 CDC42BPGQ6DT37 1551 aa17.83■□□□□ 0.45
UBE4B-206ENST00000466379 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.45
UBE4B-206ENST00000466379 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
UBE4B-206ENST00000466379 IQSEC2Q5JU85 1478 aa17.83■□□□□ 0.44
UBE4B-206ENST00000466379 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms