RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 RAPGEF2Q9Y4G8 1499 aa9.5□□□□□ -0.89
SFPQ-203ENST00000466213 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
SFPQ-203ENST00000466213 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
SFPQ-203ENST00000466213 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
SFPQ-203ENST00000466213 ARSIQ5FYB1 569 aa9.48□□□□□ -0.89
SFPQ-203ENST00000466213 AEBP1Q8IUX7 1158 aa9.48□□□□□ -0.89
SFPQ-203ENST00000466213 KCTD17Q8N5Z5 321 aa9.48□□□□□ -0.89
SFPQ-203ENST00000466213 ABL2P42684 1182 aa9.48□□□□□ -0.89
SFPQ-203ENST00000466213 CUL7Q14999 1698 aa9.47□□□□□ -0.89
SFPQ-203ENST00000466213 SOCS7O14512 581 aa9.47□□□□□ -0.89
SFPQ-203ENST00000466213 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
SFPQ-203ENST00000466213 PBRM1Q86U86 1689 aa9.46□□□□□ -0.9
SFPQ-203ENST00000466213 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
SFPQ-203ENST00000466213 IGSF3O75054 1194 aa9.46□□□□□ -0.9
SFPQ-203ENST00000466213 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.9
SFPQ-203ENST00000466213 GOLGA3Q08378 1498 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 PRXQ9BXM0 1461 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 AP1G2O75843 785 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 GLMNQ92990 594 aa9.45□□□□□ -0.9
SFPQ-203ENST00000466213 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
SFPQ-203ENST00000466213 GJA5P36382 358 aa9.44□□□□□ -0.9
SFPQ-203ENST00000466213 ADAMTS19Q8TE59 1207 aa9.44□□□□□ -0.9
SFPQ-203ENST00000466213 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
SFPQ-203ENST00000466213 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
SFPQ-203ENST00000466213 GRIN2AQ12879 1464 aa9.44□□□□□ -0.9
SFPQ-203ENST00000466213 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
SFPQ-203ENST00000466213 ADAMTS12P58397 1594 aa9.43□□□□□ -0.9
SFPQ-203ENST00000466213 GPR37L1O60883 481 aa9.42□□□□□ -0.9
SFPQ-203ENST00000466213 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
SFPQ-203ENST00000466213 TMEM134Q9H6X4 195 aa9.42□□□□□ -0.9
SFPQ-203ENST00000466213 DNAJB2P25686 324 aa9.41□□□□□ -0.9
SFPQ-203ENST00000466213 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
SFPQ-203ENST00000466213 LHX6Q9UPM6 363 aa9.41□□□□□ -0.9
SFPQ-203ENST00000466213 TATDN2Q93075 761 aa9.4□□□□□ -0.9
SFPQ-203ENST00000466213 SRPK2P78362 688 aaKnown RBP9.39□□□□□ -0.91
SFPQ-203ENST00000466213 BCL2L12Q9HB09 334 aa9.39□□□□□ -0.91
SFPQ-203ENST00000466213 PNMA3Q9UL41 463 aa9.39□□□□□ -0.91
SFPQ-203ENST00000466213 KIF21BO75037 1637 aa9.39□□□□□ -0.91
SFPQ-203ENST00000466213 POTEJP0CG39 1038 aa9.39□□□□□ -0.91
SFPQ-203ENST00000466213 RGS22Q8NE09 1264 aa9.39□□□□□ -0.91
SFPQ-203ENST00000466213 GZF1Q9H116 711 aaPredicted RBP9.39□□□□□ -0.91
SFPQ-203ENST00000466213 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
SFPQ-203ENST00000466213 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
SFPQ-203ENST00000466213 TNIKQ9UKE5 1360 aa9.38□□□□□ -0.91
SFPQ-203ENST00000466213 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
SFPQ-203ENST00000466213 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
SFPQ-203ENST00000466213 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
SFPQ-203ENST00000466213 SMAPO00193 183 aa9.38□□□□□ -0.91
SFPQ-203ENST00000466213 HDGFL1Q5TGJ6 251 aa9.38□□□□□ -0.91
SFPQ-203ENST00000466213 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
SFPQ-203ENST00000466213 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
SFPQ-203ENST00000466213 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
SFPQ-203ENST00000466213 TRIM34Q9BYJ4 488 aa9.38□□□□□ -0.91
SFPQ-203ENST00000466213 TRIM6-TRIM34B2RNG4 842 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 KDM4AO75164 1064 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 HLA-CQ95604 372 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 CHMP4AQ9BY43 222 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 NUP160Q12769 1436 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 CARMIL2Q6F5E8 1435 aa9.37□□□□□ -0.91
SFPQ-203ENST00000466213 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
SFPQ-203ENST00000466213 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
SFPQ-203ENST00000466213 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
SFPQ-203ENST00000466213 CFAP70Q5T0N1 1121 aa9.36□□□□□ -0.91
SFPQ-203ENST00000466213 HOXA2O43364 376 aa9.35□□□□□ -0.91
SFPQ-203ENST00000466213 GCGRP47871 477 aa9.35□□□□□ -0.91
SFPQ-203ENST00000466213 PRM3Q9NNZ6 103 aa9.35□□□□□ -0.91
SFPQ-203ENST00000466213 CHD1O14646 1710 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 ACIN1Q9UKV3 1341 aaKnown RBP9.34□□□□□ -0.91
SFPQ-203ENST00000466213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.34□□□□□ -0.91
SFPQ-203ENST00000466213 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 RDH13Q8NBN7 331 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
SFPQ-203ENST00000466213 SLC10A3P09131 477 aa9.33□□□□□ -0.92
SFPQ-203ENST00000466213 FDX1P10109 184 aa9.33□□□□□ -0.92
SFPQ-203ENST00000466213 RFX1P22670 979 aa9.33□□□□□ -0.92
SFPQ-203ENST00000466213 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
SFPQ-203ENST00000466213 MTMR7Q9Y216 660 aa9.33□□□□□ -0.92
SFPQ-203ENST00000466213 NDUFB9Q9Y6M9 179 aa9.33□□□□□ -0.92
SFPQ-203ENST00000466213 PRG4Q92954 1404 aaPredicted RBP9.33□□□□□ -0.92
SFPQ-203ENST00000466213 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
SFPQ-203ENST00000466213 PTPREP23469 700 aa9.32□□□□□ -0.92
SFPQ-203ENST00000466213 CEP170Q5SW79 1584 aa9.32□□□□□ -0.92
SFPQ-203ENST00000466213 IQGAP2Q13576 1575 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 TMCO4Q5TGY1 634 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 PACS2Q86VP3 889 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 LRRN4Q8WUT4 740 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 CLIP1P30622 1438 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 MFAP1P55081 439 aaKnown RBP9.31□□□□□ -0.92
SFPQ-203ENST00000466213 USP46P62068 366 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms