RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 CFAP99D6REC4 459 aa7.82□□□□□ -1.16
CDK13-203ENST00000465643 VAC14Q08AM6 782 aa7.82□□□□□ -1.16
CDK13-203ENST00000465643 SYMPKQ92797 1274 aaKnown RBP7.82□□□□□ -1.16
CDK13-203ENST00000465643 PRM3Q9NNZ6 103 aa7.82□□□□□ -1.16
CDK13-203ENST00000465643 CCDC9Q9Y3X0 531 aaKnown RBP7.82□□□□□ -1.16
CDK13-203ENST00000465643 SCUBE2Q9NQ36 999 aa7.81□□□□□ -1.16
CDK13-203ENST00000465643 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
CDK13-203ENST00000465643 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
CDK13-203ENST00000465643 USP46P62068 366 aa7.8□□□□□ -1.16
CDK13-203ENST00000465643 FUT2Q10981 343 aa7.8□□□□□ -1.16
CDK13-203ENST00000465643 POTEEQ6S8J3 1075 aa7.8□□□□□ -1.16
CDK13-203ENST00000465643 MTMR2Q13614 643 aa7.79□□□□□ -1.16
CDK13-203ENST00000465643 CECR2Q9BXF3 1484 aa7.79□□□□□ -1.16
CDK13-203ENST00000465643 AXIN2Q9Y2T1 843 aa7.79□□□□□ -1.16
CDK13-203ENST00000465643 EIF4G1Q04637 1599 aaKnown RBP7.78□□□□□ -1.16
CDK13-203ENST00000465643 C6orf229H3BNL8 230 aa7.78□□□□□ -1.16
CDK13-203ENST00000465643 CFAP70Q5T0N1 1121 aa7.78□□□□□ -1.16
CDK13-203ENST00000465643 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
CDK13-203ENST00000465643 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
CDK13-203ENST00000465643 PER1O15534 1290 aaPredicted RBP7.76□□□□□ -1.17
CDK13-203ENST00000465643 SAMD7Q7Z3H4 446 aa7.76□□□□□ -1.17
CDK13-203ENST00000465643 RSPH4AQ5TD94 716 aa7.76□□□□□ -1.17
CDK13-203ENST00000465643 HELBQ8NG08 1087 aaPredicted RBP7.76□□□□□ -1.17
CDK13-203ENST00000465643 ACIN1Q9UKV3 1341 aaKnown RBP7.75□□□□□ -1.17
CDK13-203ENST00000465643 CFHP08603 1231 aa7.75□□□□□ -1.17
CDK13-203ENST00000465643 NR6A1Q15406 480 aa7.75□□□□□ -1.17
CDK13-203ENST00000465643 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
CDK13-203ENST00000465643 RABGEF1Q9UJ41 708 aa7.75□□□□□ -1.17
CDK13-203ENST00000465643 BAZ1AQ9NRL2 1556 aaPredicted RBP7.75□□□□□ -1.17
CDK13-203ENST00000465643 RNF40O75150 1001 aa7.75□□□□□ -1.17
CDK13-203ENST00000465643 SRPK2P78362 688 aaKnown RBP7.75□□□□□ -1.17
CDK13-203ENST00000465643 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
CDK13-203ENST00000465643 UCN2Q96RP3 112 aa7.75□□□□□ -1.17
CDK13-203ENST00000465643 WASHC4Q2M389 1173 aa7.74□□□□□ -1.17
CDK13-203ENST00000465643 PPP1R12CQ9BZL4 782 aa7.74□□□□□ -1.17
CDK13-203ENST00000465643 SMARCA4P51532 1647 aa7.74□□□□□ -1.17
CDK13-203ENST00000465643 MAMSTRQ6ZN01 415 aa7.74□□□□□ -1.17
CDK13-203ENST00000465643 KCNH8Q96L42 1107 aa7.74□□□□□ -1.17
CDK13-203ENST00000465643 ALG2Q9H553 416 aa7.74□□□□□ -1.17
CDK13-203ENST00000465643 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
CDK13-203ENST00000465643 PRR7Q8TB68 274 aa7.73□□□□□ -1.17
CDK13-203ENST00000465643 CC2D2AQ9P2K1 1620 aa7.73□□□□□ -1.17
CDK13-203ENST00000465643 PALM3A6NDB9 673 aaPredicted RBP7.73□□□□□ -1.17
CDK13-203ENST00000465643 PUS10Q3MIT2 529 aaKnown RBP7.73□□□□□ -1.17
CDK13-203ENST00000465643 MROH2BQ7Z745 1585 aa7.72□□□□□ -1.17
CDK13-203ENST00000465643 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
CDK13-203ENST00000465643 VARS2Q5ST30 1063 aaKnown RBP7.72□□□□□ -1.17
CDK13-203ENST00000465643 ARHGAP33O14559 1287 aa7.71□□□□□ -1.17
CDK13-203ENST00000465643 SNPHO15079 494 aa7.71□□□□□ -1.17
CDK13-203ENST00000465643 LMOD1P29536 600 aaPredicted RBP7.71□□□□□ -1.17
CDK13-203ENST00000465643 TFIP11Q9UBB9 837 aaKnown RBP7.71□□□□□ -1.17
CDK13-203ENST00000465643 ATP6V1AP38606 617 aa7.7□□□□□ -1.18
CDK13-203ENST00000465643 HDGFP51858 240 aaKnown RBP7.7□□□□□ -1.18
CDK13-203ENST00000465643 VPS9D1Q9Y2B5 631 aa7.7□□□□□ -1.18
CDK13-203ENST00000465643 SLF2Q8IX21 1173 aa7.69□□□□□ -1.18
CDK13-203ENST00000465643 GRIPAP1Q4V328 841 aa7.69□□□□□ -1.18
CDK13-203ENST00000465643 MTMR7Q9Y216 660 aa7.69□□□□□ -1.18
CDK13-203ENST00000465643 ERBB3P21860 1342 aa7.69□□□□□ -1.18
CDK13-203ENST00000465643 TMCO4Q5TGY1 634 aa7.68□□□□□ -1.18
CDK13-203ENST00000465643 SLC27A5Q9Y2P5 690 aa7.68□□□□□ -1.18
CDK13-203ENST00000465643 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
CDK13-203ENST00000465643 SLC4A5Q9BY07 1137 aa7.68□□□□□ -1.18
CDK13-203ENST00000465643 RSF1Q96T23 1441 aaPredicted RBP7.68□□□□□ -1.18
CDK13-203ENST00000465643 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
CDK13-203ENST00000465643 MORN1Q5T089 497 aa7.67□□□□□ -1.18
CDK13-203ENST00000465643 ATAD2BQ9ULI0 1458 aa7.67□□□□□ -1.18
CDK13-203ENST00000465643 SMARCA2P51531 1590 aa7.66□□□□□ -1.18
CDK13-203ENST00000465643 CSB-PGBD3P0DP91 1061 aa7.66□□□□□ -1.18
CDK13-203ENST00000465643 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
CDK13-203ENST00000465643 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
CDK13-203ENST00000465643 RNF19BQ6ZMZ0 732 aa7.66□□□□□ -1.18
CDK13-203ENST00000465643 OTUD5Q96G74 571 aa7.66□□□□□ -1.18
CDK13-203ENST00000465643 ZFRQ96KR1 1074 aaKnown RBP7.66□□□□□ -1.18
CDK13-203ENST00000465643 FOXD4L5Q5VV16 416 aaPredicted RBP7.66□□□□□ -1.18
CDK13-203ENST00000465643 RETREG3Q86VR2 466 aa7.66□□□□□ -1.18
CDK13-203ENST00000465643 FOXD4L4Q8WXT5 416 aaPredicted RBP7.66□□□□□ -1.18
CDK13-203ENST00000465643 MAFBQ9Y5Q3 323 aaPredicted RBP7.66□□□□□ -1.18
CDK13-203ENST00000465643 SLC4A3P48751 1232 aa7.65□□□□□ -1.18
CDK13-203ENST00000465643 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
CDK13-203ENST00000465643 MARVELD3Q96A59 401 aa7.65□□□□□ -1.18
CDK13-203ENST00000465643 ZNF428Q96B54 188 aa7.65□□□□□ -1.18
CDK13-203ENST00000465643 WIZO95785 1651 aa7.65□□□□□ -1.18
CDK13-203ENST00000465643 BHMG1C9JSJ3 638 aaPredicted RBP7.64□□□□□ -1.19
CDK13-203ENST00000465643 PIK3CDO00329 1044 aa7.64□□□□□ -1.19
CDK13-203ENST00000465643 USTQ9Y2C2 406 aa7.63□□□□□ -1.19
CDK13-203ENST00000465643 NCAPD3P42695 1498 aa7.63□□□□□ -1.19
CDK13-203ENST00000465643 BAZ1BQ9UIG0 1483 aaKnown RBP7.63□□□□□ -1.19
CDK13-203ENST00000465643 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
CDK13-203ENST00000465643 BRD1O95696 1058 aa7.63□□□□□ -1.19
CDK13-203ENST00000465643 FBXO45P0C2W1 286 aa7.63□□□□□ -1.19
CDK13-203ENST00000465643 PEG3Q9GZU2 1588 aa7.63□□□□□ -1.19
CDK13-203ENST00000465643 KMT5BQ4FZB7 885 aa7.62□□□□□ -1.19
CDK13-203ENST00000465643 LYPD8Q6UX82 237 aa7.62□□□□□ -1.19
CDK13-203ENST00000465643 ACTN4O43707 911 aaKnown RBP7.61□□□□□ -1.19
CDK13-203ENST00000465643 LAPTM4BQ86VI4 370 aa7.61□□□□□ -1.19
CDK13-203ENST00000465643 MAP10Q9P2G4 905 aa7.61□□□□□ -1.19
CDK13-203ENST00000465643 PDE4CQ08493 712 aa7.61□□□□□ -1.19
CDK13-203ENST00000465643 NBPF3Q9H094 633 aa7.61□□□□□ -1.19
CDK13-203ENST00000465643 SOX11P35716 441 aa7.6□□□□□ -1.19
CDK13-203ENST00000465643 HMGXB3Q12766 1538 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms