RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
UBR3-207ENST00000465630 HOXA2O43364 376 aa8.82□□□□□ -1
UBR3-207ENST00000465630 CD2BP2O95400 341 aaKnown RBP8.82□□□□□ -1
UBR3-207ENST00000465630 MMP16P51512 607 aa8.82□□□□□ -1
UBR3-207ENST00000465630 GUCA2AQ02747 115 aa8.82□□□□□ -1
UBR3-207ENST00000465630 FAM217BQ9NTX9 383 aaPredicted RBP8.82□□□□□ -1
UBR3-207ENST00000465630 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
UBR3-207ENST00000465630 DXOO77932 396 aaKnown RBP8.81□□□□□ -1
UBR3-207ENST00000465630 ZNF775Q96BV0 537 aaPredicted RBP8.81□□□□□ -1
UBR3-207ENST00000465630 USB1Q9BQ65 265 aaKnown RBP8.81□□□□□ -1
UBR3-207ENST00000465630 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
UBR3-207ENST00000465630 AAASQ9NRG9 546 aa8.81□□□□□ -1
UBR3-207ENST00000465630 CLCN1P35523 988 aa8.8□□□□□ -1
UBR3-207ENST00000465630 USP46P62068 366 aa8.8□□□□□ -1
UBR3-207ENST00000465630 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
UBR3-207ENST00000465630 TRIM32Q13049 653 aa8.79□□□□□ -1
UBR3-207ENST00000465630 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
UBR3-207ENST00000465630 CYP4X1Q8N118 509 aa8.77□□□□□ -1.01
UBR3-207ENST00000465630 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
UBR3-207ENST00000465630 DACH1Q9UI36 760 aa8.77□□□□□ -1.01
UBR3-207ENST00000465630 AVPP01185 164 aa8.75□□□□□ -1.01
UBR3-207ENST00000465630 CRIPAKQ8N1N5 446 aa8.75□□□□□ -1.01
UBR3-207ENST00000465630 WNT7AO00755 349 aa8.74□□□□□ -1.01
UBR3-207ENST00000465630 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
UBR3-207ENST00000465630 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
UBR3-207ENST00000465630 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
UBR3-207ENST00000465630 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
UBR3-207ENST00000465630 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
UBR3-207ENST00000465630 TTC24A2A3L6 582 aaPredicted RBP8.72□□□□□ -1.01
UBR3-207ENST00000465630 ZMYND10O75800 440 aa8.72□□□□□ -1.01
UBR3-207ENST00000465630 SMPD1P17405 629 aa8.72□□□□□ -1.01
UBR3-207ENST00000465630 JUNDP17535 347 aa8.72□□□□□ -1.01
UBR3-207ENST00000465630 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
UBR3-207ENST00000465630 SKOR1P84550 965 aa8.72□□□□□ -1.01
UBR3-207ENST00000465630 NUTM1Q86Y26 1132 aa8.72□□□□□ -1.01
UBR3-207ENST00000465630 J3QL48 77 aa8.71□□□□□ -1.02
UBR3-207ENST00000465630 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.02
UBR3-207ENST00000465630 FDX1P10109 184 aa8.7□□□□□ -1.02
UBR3-207ENST00000465630 RETREG3Q86VR2 466 aa8.7□□□□□ -1.02
UBR3-207ENST00000465630 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
UBR3-207ENST00000465630 AXIN1O15169 862 aa8.69□□□□□ -1.02
UBR3-207ENST00000465630 CTC1Q2NKJ3 1217 aa8.69□□□□□ -1.02
UBR3-207ENST00000465630 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
UBR3-207ENST00000465630 NDUFV2P19404 249 aa8.68□□□□□ -1.02
UBR3-207ENST00000465630 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
UBR3-207ENST00000465630 TTLL12Q14166 644 aaPredicted RBP8.68□□□□□ -1.02
UBR3-207ENST00000465630 AMHR2Q16671 573 aa8.68□□□□□ -1.02
UBR3-207ENST00000465630 RC3H1Q5TC82 1133 aaKnown RBP8.68□□□□□ -1.02
UBR3-207ENST00000465630 PTCRAQ6ISU1 281 aaPredicted RBP8.68□□□□□ -1.02
UBR3-207ENST00000465630 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
UBR3-207ENST00000465630 MOXD2PA6NHM9 499 aa8.67□□□□□ -1.02
UBR3-207ENST00000465630 C6orf229H3BNL8 230 aa8.67□□□□□ -1.02
UBR3-207ENST00000465630 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
UBR3-207ENST00000465630 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
UBR3-207ENST00000465630 WNT7BP56706 349 aa8.66□□□□□ -1.02
UBR3-207ENST00000465630 HPS1Q92902 700 aa8.65□□□□□ -1.02
UBR3-207ENST00000465630 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
UBR3-207ENST00000465630 C11orf95C9JLR9 678 aaPredicted RBP8.63□□□□□ -1.03
UBR3-207ENST00000465630 MS4A1P11836 297 aa8.63□□□□□ -1.03
UBR3-207ENST00000465630 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
UBR3-207ENST00000465630 BEGAINQ9BUH8 593 aa8.63□□□□□ -1.03
UBR3-207ENST00000465630 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
UBR3-207ENST00000465630 SIAH2O43255 324 aa8.61□□□□□ -1.03
UBR3-207ENST00000465630 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
UBR3-207ENST00000465630 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
UBR3-207ENST00000465630 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
UBR3-207ENST00000465630 TRIM66O15016 1216 aa8.6□□□□□ -1.03
UBR3-207ENST00000465630 ALDH1A1P00352 501 aa8.6□□□□□ -1.03
UBR3-207ENST00000465630 SH3BP2P78314 561 aa8.6□□□□□ -1.03
UBR3-207ENST00000465630 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
UBR3-207ENST00000465630 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.03
UBR3-207ENST00000465630 MTMR2Q13614 643 aa8.59□□□□□ -1.03
UBR3-207ENST00000465630 PTPRNQ16849 979 aa8.59□□□□□ -1.03
UBR3-207ENST00000465630 RSBN1LQ6PCB5 846 aaPredicted RBP8.58□□□□□ -1.04
UBR3-207ENST00000465630 EHBP1Q8NDI1 1231 aa8.58□□□□□ -1.04
UBR3-207ENST00000465630 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
UBR3-207ENST00000465630 EVA1BQ9NVM1 165 aa8.58□□□□□ -1.04
UBR3-207ENST00000465630 PCDHB15Q9Y5E8 787 aa8.58□□□□□ -1.04
UBR3-207ENST00000465630 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
UBR3-207ENST00000465630 BAP1Q92560 729 aa8.56□□□□□ -1.04
UBR3-207ENST00000465630 SPDYE5A6NIY4 337 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 GJA5P36382 358 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 KCNH2Q12809 1159 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
UBR3-207ENST00000465630 DESI1Q6ICB0 168 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 AK7Q96M32 723 aa8.55□□□□□ -1.04
UBR3-207ENST00000465630 SPTLC1O15269 473 aa8.54□□□□□ -1.04
UBR3-207ENST00000465630 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
UBR3-207ENST00000465630 WFS1O76024 890 aa8.53□□□□□ -1.04
UBR3-207ENST00000465630 LCE2CQ5TA81 110 aa8.53□□□□□ -1.04
UBR3-207ENST00000465630 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
UBR3-207ENST00000465630 HRCP23327 699 aa8.52□□□□□ -1.05
UBR3-207ENST00000465630 LYPD8Q6UX82 237 aa8.52□□□□□ -1.05
UBR3-207ENST00000465630 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
UBR3-207ENST00000465630 SENP2Q9HC62 589 aa8.52□□□□□ -1.05
UBR3-207ENST00000465630 BMP1P13497 986 aa8.51□□□□□ -1.05
UBR3-207ENST00000465630 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
UBR3-207ENST00000465630 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms