RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 NUTM2DQ5VT03 806 aaPredicted RBP9.99□□□□□ -0.81
CACNA1C-223ENST00000465278 C14orf37Q86TY3 774 aa9.99□□□□□ -0.81
CACNA1C-223ENST00000465278 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
CACNA1C-223ENST00000465278 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
CACNA1C-223ENST00000465278 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-223ENST00000465278 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
CACNA1C-223ENST00000465278 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
CACNA1C-223ENST00000465278 THSD4Q6ZMP0 1018 aa9.97□□□□□ -0.81
CACNA1C-223ENST00000465278 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
CACNA1C-223ENST00000465278 SYMPKQ92797 1274 aaKnown RBP9.97□□□□□ -0.81
CACNA1C-223ENST00000465278 LILRB3O75022 631 aa9.96□□□□□ -0.82
CACNA1C-223ENST00000465278 HRCP23327 699 aa9.95□□□□□ -0.82
CACNA1C-223ENST00000465278 GJA5P36382 358 aa9.95□□□□□ -0.82
CACNA1C-223ENST00000465278 RFC5P40937 340 aa9.95□□□□□ -0.82
CACNA1C-223ENST00000465278 SLC27A5Q9Y2P5 690 aa9.95□□□□□ -0.82
CACNA1C-223ENST00000465278 ERCC6L2Q5T890 1561 aa9.94□□□□□ -0.82
CACNA1C-223ENST00000465278 C6orf229H3BNL8 230 aa9.94□□□□□ -0.82
CACNA1C-223ENST00000465278 TUSC1Q2TAM9 212 aa9.94□□□□□ -0.82
CACNA1C-223ENST00000465278 MORN1Q5T089 497 aa9.94□□□□□ -0.82
CACNA1C-223ENST00000465278 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
CACNA1C-223ENST00000465278 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
CACNA1C-223ENST00000465278 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
CACNA1C-223ENST00000465278 PPP2R2DQ66LE6 453 aa9.92□□□□□ -0.82
CACNA1C-223ENST00000465278 SCUBE3Q8IX30 993 aa9.92□□□□□ -0.82
CACNA1C-223ENST00000465278 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
CACNA1C-223ENST00000465278 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
CACNA1C-223ENST00000465278 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
CACNA1C-223ENST00000465278 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.82
CACNA1C-223ENST00000465278 AP1G2O75843 785 aa9.9□□□□□ -0.82
CACNA1C-223ENST00000465278 COPS2P61201 443 aa9.9□□□□□ -0.82
CACNA1C-223ENST00000465278 MTMR2Q13614 643 aa9.9□□□□□ -0.82
CACNA1C-223ENST00000465278 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-223ENST00000465278 TSC1Q92574 1164 aa9.9□□□□□ -0.82
CACNA1C-223ENST00000465278 SNRKQ9NRH2 765 aa9.89□□□□□ -0.83
CACNA1C-223ENST00000465278 TMEM259Q4ZIN3 620 aa9.88□□□□□ -0.83
CACNA1C-223ENST00000465278 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
CACNA1C-223ENST00000465278 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
CACNA1C-223ENST00000465278 SMARCA2P51531 1590 aa9.88□□□□□ -0.83
CACNA1C-223ENST00000465278 NESP48681 1621 aa9.87□□□□□ -0.83
CACNA1C-223ENST00000465278 CTDSPL2Q05D32 466 aa9.87□□□□□ -0.83
CACNA1C-223ENST00000465278 FLIIQ13045 1269 aa9.87□□□□□ -0.83
CACNA1C-223ENST00000465278 FBXO41Q8TF61 875 aa9.87□□□□□ -0.83
CACNA1C-223ENST00000465278 CFAP99D6REC4 459 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 NR1I2O75469 434 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 Q3C1V9 767 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 ILDR2Q71H61 639 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 ERICH6Q7L0X2 663 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 PCDH10Q9P2E7 1040 aa9.86□□□□□ -0.83
CACNA1C-223ENST00000465278 BRICD5Q6PL45 260 aa9.85□□□□□ -0.83
CACNA1C-223ENST00000465278 SPDYE5A6NIY4 337 aa9.84□□□□□ -0.83
CACNA1C-223ENST00000465278 BANK1Q8NDB2 785 aa9.84□□□□□ -0.83
CACNA1C-223ENST00000465278 FMNL1O95466 1100 aaPredicted RBP9.83□□□□□ -0.84
CACNA1C-223ENST00000465278 ZNF516Q92618 1163 aa9.83□□□□□ -0.84
CACNA1C-223ENST00000465278 THAP11Q96EK4 314 aa9.83□□□□□ -0.84
CACNA1C-223ENST00000465278 MTRQ99707 1265 aa9.83□□□□□ -0.84
CACNA1C-223ENST00000465278 ZMYND15Q9H091 742 aa9.83□□□□□ -0.84
CACNA1C-223ENST00000465278 MCM6Q14566 821 aa9.82□□□□□ -0.84
CACNA1C-223ENST00000465278 NYAP1Q6ZVC0 841 aa9.82□□□□□ -0.84
CACNA1C-223ENST00000465278 RETREG3Q86VR2 466 aa9.82□□□□□ -0.84
CACNA1C-223ENST00000465278 USB1Q9BQ65 265 aaKnown RBP9.82□□□□□ -0.84
CACNA1C-223ENST00000465278 RNF166Q96A37 237 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-223ENST00000465278 CLUAP1Q96AJ1 413 aa9.81□□□□□ -0.84
CACNA1C-223ENST00000465278 ARAP1Q96P48 1450 aa9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 USP17L8P0C7I0 530 aa9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 LRRN4Q8WUT4 740 aa9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 SPSB2Q99619 263 aa9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
CACNA1C-223ENST00000465278 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
CACNA1C-223ENST00000465278 PER1O15534 1290 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-223ENST00000465278 ZPR1O75312 459 aa9.79□□□□□ -0.84
CACNA1C-223ENST00000465278 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-223ENST00000465278 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-223ENST00000465278 POM121Q96HA1 1249 aa9.79□□□□□ -0.84
CACNA1C-223ENST00000465278 TLL1O43897 1013 aa9.78□□□□□ -0.84
CACNA1C-223ENST00000465278 CYB5RLQ6IPT4 315 aa9.78□□□□□ -0.84
CACNA1C-223ENST00000465278 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
CACNA1C-223ENST00000465278 NKX2-3Q8TAU0 364 aa9.78□□□□□ -0.84
CACNA1C-223ENST00000465278 HCSTQ9UBK5 93 aa9.78□□□□□ -0.84
CACNA1C-223ENST00000465278 IL21Q9HBE4 155 aa9.77□□□□□ -0.85
CACNA1C-223ENST00000465278 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
CACNA1C-223ENST00000465278 HECW2Q9P2P5 1572 aa9.75□□□□□ -0.85
CACNA1C-223ENST00000465278 RAD21O60216 631 aa9.74□□□□□ -0.85
CACNA1C-223ENST00000465278 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
CACNA1C-223ENST00000465278 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
CACNA1C-223ENST00000465278 PRDM9Q9NQV7 894 aa9.74□□□□□ -0.85
CACNA1C-223ENST00000465278 LYPD8Q6UX82 237 aa9.73□□□□□ -0.85
CACNA1C-223ENST00000465278 COG6Q9Y2V7 657 aa9.73□□□□□ -0.85
CACNA1C-223ENST00000465278 SCRIBQ14160 1630 aa9.73□□□□□ -0.85
CACNA1C-223ENST00000465278 JUNDP17535 347 aa9.72□□□□□ -0.85
CACNA1C-223ENST00000465278 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
CACNA1C-223ENST00000465278 NR6A1Q15406 480 aa9.72□□□□□ -0.85
CACNA1C-223ENST00000465278 DESI1Q6ICB0 168 aa9.72□□□□□ -0.85
CACNA1C-223ENST00000465278 ADH1BP00325 375 aa9.71□□□□□ -0.86
CACNA1C-223ENST00000465278 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
CACNA1C-223ENST00000465278 TBC1D2BQ9UPU7 963 aa9.71□□□□□ -0.86
CACNA1C-223ENST00000465278 LAMC3Q9Y6N6 1575 aa9.71□□□□□ -0.86
CACNA1C-223ENST00000465278 ABL2P42684 1182 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms