RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 SLIT2O94813 1529 aa24.43■■□□□ 1.5
SNX12-203ENST00000465030 KRT27Q7Z3Y8 459 aa24.4■■□□□ 1.5
SNX12-203ENST00000465030 CHIC2Q9UKJ5 165 aa24.39■■□□□ 1.49
SNX12-203ENST00000465030 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.49
SNX12-203ENST00000465030 EN1Q05925 392 aaPredicted RBP24.36■■□□□ 1.49
SNX12-203ENST00000465030 PXDNQ92626 1479 aa24.35■■□□□ 1.49
SNX12-203ENST00000465030 ONECUT3O60422 494 aaPredicted RBP24.35■■□□□ 1.49
SNX12-203ENST00000465030 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
SNX12-203ENST00000465030 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
SNX12-203ENST00000465030 UTRNP46939 3433 aa24.33■■□□□ 1.49
SNX12-203ENST00000465030 SENP3-EIF4A1A0A087X0R7 540 aa24.32■■□□□ 1.48
SNX12-203ENST00000465030 VPS72Q15906 364 aa24.31■■□□□ 1.48
SNX12-203ENST00000465030 DISP2A7MBM2 1401 aa24.28■■□□□ 1.48
SNX12-203ENST00000465030 ADGRL2O95490 1459 aa24.27■■□□□ 1.48
SNX12-203ENST00000465030 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
SNX12-203ENST00000465030 IQGAP3Q86VI3 1631 aa24.27■■□□□ 1.48
SNX12-203ENST00000465030 ANKRD50Q9ULJ7 1429 aa24.27■■□□□ 1.48
SNX12-203ENST00000465030 DCAF8L1A6NGE4 600 aa24.26■■□□□ 1.47
SNX12-203ENST00000465030 E9PCH4 1651 aa24.26■■□□□ 1.47
SNX12-203ENST00000465030 USP32Q8NFA0 1604 aa24.24■■□□□ 1.47
SNX12-203ENST00000465030 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
SNX12-203ENST00000465030 ESCO1Q5FWF5 840 aa24.24■■□□□ 1.47
SNX12-203ENST00000465030 CCDC9Q9Y3X0 531 aaKnown RBP24.24■■□□□ 1.47
SNX12-203ENST00000465030 CEP350Q5VT06 3117 aa24.24■■□□□ 1.47
SNX12-203ENST00000465030 FOXO3O43524 673 aa24.23■■□□□ 1.47
SNX12-203ENST00000465030 ROBO2Q9HCK4 1378 aa24.23■■□□□ 1.47
SNX12-203ENST00000465030 ZNF784Q8NCA9 323 aaPredicted RBP24.22■■□□□ 1.47
SNX12-203ENST00000465030 A0A0G2JS52 829 aa24.21■■□□□ 1.47
SNX12-203ENST00000465030 MYT1Q01538 1121 aa24.21■■□□□ 1.47
SNX12-203ENST00000465030 EZH2Q15910 746 aaKnown RBP24.2■■□□□ 1.46
SNX12-203ENST00000465030 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
SNX12-203ENST00000465030 NINLQ9Y2I6 1382 aa24.18■■□□□ 1.46
SNX12-203ENST00000465030 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
SNX12-203ENST00000465030 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
SNX12-203ENST00000465030 PPP1R1BQ9UD71 204 aaPredicted RBP24.16■■□□□ 1.46
SNX12-203ENST00000465030 PRAG1Q86YV5 1406 aa24.16■■□□□ 1.46
SNX12-203ENST00000465030 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
SNX12-203ENST00000465030 NWD2Q9ULI1 1742 aa24.15■■□□□ 1.46
SNX12-203ENST00000465030 SPATA31A3Q5VYP0 1347 aa24.15■■□□□ 1.46
SNX12-203ENST00000465030 PLCH1Q4KWH8 1693 aa24.15■■□□□ 1.46
SNX12-203ENST00000465030 C1QTNF8P60827 252 aa24.15■■□□□ 1.46
SNX12-203ENST00000465030 FAM98CQ17RN3 349 aaKnown RBP24.14■■□□□ 1.45
SNX12-203ENST00000465030 CAMKK2Q96RR4 588 aa24.14■■□□□ 1.45
SNX12-203ENST00000465030 CDC42BPGQ6DT37 1551 aa24.13■■□□□ 1.45
SNX12-203ENST00000465030 HFM1A2PYH4 1435 aa24.13■■□□□ 1.45
SNX12-203ENST00000465030 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
SNX12-203ENST00000465030 ADGRB2O60241 1585 aa24.11■■□□□ 1.45
SNX12-203ENST00000465030 HAP1P54257 671 aaPredicted RBP24.1■■□□□ 1.45
SNX12-203ENST00000465030 PARD3Q8TEW0 1356 aa24.09■■□□□ 1.45
SNX12-203ENST00000465030 SPON1Q9HCB6 807 aa24.09■■□□□ 1.45
SNX12-203ENST00000465030 NEXMIFQ5QGS0 1516 aa24.09■■□□□ 1.45
SNX12-203ENST00000465030 CAMTA1Q9Y6Y1 1673 aa24.08■■□□□ 1.45
SNX12-203ENST00000465030 CCDC144AA2RUR9 1427 aa24.06■■□□□ 1.44
SNX12-203ENST00000465030 CABLES1Q8TDN4 633 aa24.05■■□□□ 1.44
SNX12-203ENST00000465030 KCNQ2O43526 872 aa24.04■■□□□ 1.44
SNX12-203ENST00000465030 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
SNX12-203ENST00000465030 FAM83GA6ND36 823 aa24.01■■□□□ 1.43
SNX12-203ENST00000465030 TRIM37O94972 964 aa24.01■■□□□ 1.43
SNX12-203ENST00000465030 RREB1Q92766 1687 aa24■■□□□ 1.43
SNX12-203ENST00000465030 NUTM2FA1L443 756 aa24■■□□□ 1.43
SNX12-203ENST00000465030 NBPF8Q3BBV2 869 aa24■■□□□ 1.43
SNX12-203ENST00000465030 NBPF14Q5TI25 921 aa24■■□□□ 1.43
SNX12-203ENST00000465030 KRT28Q7Z3Y7 464 aa24■■□□□ 1.43
SNX12-203ENST00000465030 NRAPQ86VF7 1730 aa24■■□□□ 1.43
SNX12-203ENST00000465030 APBA3O96018 575 aa23.99■■□□□ 1.43
SNX12-203ENST00000465030 NAIPQ13075 1403 aa23.99■■□□□ 1.43
SNX12-203ENST00000465030 NUP188Q5SRE5 1749 aa23.98■■□□□ 1.43
SNX12-203ENST00000465030 PLEKHG5O94827 1062 aa23.98■■□□□ 1.43
SNX12-203ENST00000465030 ABCA3Q99758 1704 aa23.97■■□□□ 1.43
SNX12-203ENST00000465030 THSD7AQ9UPZ6 1657 aa23.97■■□□□ 1.43
SNX12-203ENST00000465030 KIF1AQ12756 1690 aa23.96■■□□□ 1.43
SNX12-203ENST00000465030 NUP155O75694 1391 aa23.96■■□□□ 1.43
SNX12-203ENST00000465030 FAM196AQ6ZSG2 479 aa23.95■■□□□ 1.42
SNX12-203ENST00000465030 BTG4Q9NY30 223 aa23.95■■□□□ 1.42
SNX12-203ENST00000465030 SPATA31A5Q5VU36 1347 aa23.94■■□□□ 1.42
SNX12-203ENST00000465030 SPATA31A7Q8IWB4 1347 aa23.94■■□□□ 1.42
SNX12-203ENST00000465030 ARHGEF10O15013 1369 aa23.91■■□□□ 1.42
SNX12-203ENST00000465030 VGFO15240 615 aaPredicted RBP23.9■■□□□ 1.42
SNX12-203ENST00000465030 PSME1Q06323 249 aa23.9■■□□□ 1.42
SNX12-203ENST00000465030 FAM50AQ14320 339 aaKnown RBP23.89■■□□□ 1.41
SNX12-203ENST00000465030 SBNO1A3KN83 1393 aa23.89■■□□□ 1.41
SNX12-203ENST00000465030 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
SNX12-203ENST00000465030 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
SNX12-203ENST00000465030 NRKQ7Z2Y5 1582 aa23.86■■□□□ 1.41
SNX12-203ENST00000465030 FMN2Q9NZ56 1722 aa23.85■■□□□ 1.41
SNX12-203ENST00000465030 COL14A1Q05707 1796 aaKnown RBP23.85■■□□□ 1.41
SNX12-203ENST00000465030 RRBP1Q9P2E9 1410 aaKnown RBP23.84■■□□□ 1.41
SNX12-203ENST00000465030 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
SNX12-203ENST00000465030 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
SNX12-203ENST00000465030 PHF8Q9UPP1 1060 aa23.82■■□□□ 1.4
SNX12-203ENST00000465030 CHD4Q14839 1912 aa23.81■■□□□ 1.4
SNX12-203ENST00000465030 TECPR2O15040 1411 aa23.81■■□□□ 1.4
SNX12-203ENST00000465030 ROCK1Q13464 1354 aa23.79■■□□□ 1.4
SNX12-203ENST00000465030 MYOM1P52179 1685 aa23.79■■□□□ 1.4
SNX12-203ENST00000465030 APLP2Q06481 763 aa23.78■■□□□ 1.4
SNX12-203ENST00000465030 NRXN1Q9ULB1 1477 aa23.78■■□□□ 1.4
SNX12-203ENST00000465030 SPATA31A1Q5TZJ5 1347 aa23.78■■□□□ 1.4
SNX12-203ENST00000465030 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
SNX12-203ENST00000465030 KIF1BO60333 1816 aa23.77■■□□□ 1.4
SNX12-203ENST00000465030 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms