RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.49
SCAF8-205ENST00000464628 KANK4Q5T7N3 995 aaPredicted RBP18.14■□□□□ 0.49
SCAF8-205ENST00000464628 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
SCAF8-205ENST00000464628 TNS1Q9HBL0 1735 aaKnown RBP18.14■□□□□ 0.49
SCAF8-205ENST00000464628 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
SCAF8-205ENST00000464628 ORAI2Q96SN7 254 aa18.13■□□□□ 0.49
SCAF8-205ENST00000464628 NWD2Q9ULI1 1742 aa18.11■□□□□ 0.49
SCAF8-205ENST00000464628 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
SCAF8-205ENST00000464628 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
SCAF8-205ENST00000464628 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
SCAF8-205ENST00000464628 ABCA3Q99758 1704 aa18.07■□□□□ 0.48
SCAF8-205ENST00000464628 IFFO2Q5TF58 517 aa18.07■□□□□ 0.48
SCAF8-205ENST00000464628 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
SCAF8-205ENST00000464628 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
SCAF8-205ENST00000464628 CDC42BPGQ6DT37 1551 aa18.05■□□□□ 0.48
SCAF8-205ENST00000464628 NEXMIFQ5QGS0 1516 aa18.05■□□□□ 0.48
SCAF8-205ENST00000464628 BAG6P46379 1132 aa18.05■□□□□ 0.48
SCAF8-205ENST00000464628 PRAG1Q86YV5 1406 aa18.05■□□□□ 0.48
SCAF8-205ENST00000464628 NRAPQ86VF7 1730 aa18.04■□□□□ 0.48
SCAF8-205ENST00000464628 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
SCAF8-205ENST00000464628 DISP2A7MBM2 1401 aa18.04■□□□□ 0.48
SCAF8-205ENST00000464628 CAMTA1Q9Y6Y1 1673 aa18.03■□□□□ 0.48
SCAF8-205ENST00000464628 RREB1Q92766 1687 aa18.03■□□□□ 0.48
SCAF8-205ENST00000464628 ONECUT3O60422 494 aaPredicted RBP18.02■□□□□ 0.48
SCAF8-205ENST00000464628 KRT27Q7Z3Y8 459 aa18.02■□□□□ 0.48
SCAF8-205ENST00000464628 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.47
SCAF8-205ENST00000464628 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
SCAF8-205ENST00000464628 EN1Q05925 392 aaPredicted RBP18■□□□□ 0.47
SCAF8-205ENST00000464628 NUP188Q5SRE5 1749 aa17.99■□□□□ 0.47
SCAF8-205ENST00000464628 VPS72Q15906 364 aa17.98■□□□□ 0.47
SCAF8-205ENST00000464628 ADGRB2O60241 1585 aa17.96■□□□□ 0.47
SCAF8-205ENST00000464628 XPCQ01831 940 aaPredicted RBP17.96■□□□□ 0.47
SCAF8-205ENST00000464628 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
SCAF8-205ENST00000464628 THSD7AQ9UPZ6 1657 aa17.95■□□□□ 0.46
SCAF8-205ENST00000464628 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
SCAF8-205ENST00000464628 HFM1A2PYH4 1435 aa17.93■□□□□ 0.46
SCAF8-205ENST00000464628 ESCO1Q5FWF5 840 aa17.92■□□□□ 0.46
SCAF8-205ENST00000464628 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
SCAF8-205ENST00000464628 FOXO3O43524 673 aa17.91■□□□□ 0.46
SCAF8-205ENST00000464628 SPATA31A3Q5VYP0 1347 aa17.91■□□□□ 0.46
SCAF8-205ENST00000464628 KIF1BO60333 1816 aa17.91■□□□□ 0.46
SCAF8-205ENST00000464628 EZH2Q15910 746 aaKnown RBP17.9■□□□□ 0.46
SCAF8-205ENST00000464628 UTRNP46939 3433 aa17.89■□□□□ 0.45
SCAF8-205ENST00000464628 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.45
SCAF8-205ENST00000464628 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
SCAF8-205ENST00000464628 NINLQ9Y2I6 1382 aa17.89■□□□□ 0.45
SCAF8-205ENST00000464628 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
SCAF8-205ENST00000464628 RGPD8O14715 1765 aaPredicted RBP17.86■□□□□ 0.45
SCAF8-205ENST00000464628 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
SCAF8-205ENST00000464628 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
SCAF8-205ENST00000464628 CCDC144AA2RUR9 1427 aa17.86■□□□□ 0.45
SCAF8-205ENST00000464628 TNS3Q68CZ2 1445 aa17.86■□□□□ 0.45
SCAF8-205ENST00000464628 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
SCAF8-205ENST00000464628 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
SCAF8-205ENST00000464628 NAIPQ13075 1403 aa17.84■□□□□ 0.45
SCAF8-205ENST00000464628 FAM98CQ17RN3 349 aaKnown RBP17.84■□□□□ 0.45
SCAF8-205ENST00000464628 PPLO60437 1756 aa17.84■□□□□ 0.45
SCAF8-205ENST00000464628 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
SCAF8-205ENST00000464628 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
SCAF8-205ENST00000464628 CHD4Q14839 1912 aa17.83■□□□□ 0.44
SCAF8-205ENST00000464628 IFT172Q9UG01 1749 aa17.83■□□□□ 0.44
SCAF8-205ENST00000464628 CASZ1Q86V15 1759 aa17.82■□□□□ 0.44
SCAF8-205ENST00000464628 KNDC1Q76NI1 1749 aa17.82■□□□□ 0.44
SCAF8-205ENST00000464628 A0A0G2JS52 829 aa17.82■□□□□ 0.44
SCAF8-205ENST00000464628 MYT1Q01538 1121 aa17.82■□□□□ 0.44
SCAF8-205ENST00000464628 NRKQ7Z2Y5 1582 aa17.81■□□□□ 0.44
SCAF8-205ENST00000464628 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
SCAF8-205ENST00000464628 CABLES1Q8TDN4 633 aa17.8■□□□□ 0.44
SCAF8-205ENST00000464628 NUP155O75694 1391 aa17.79■□□□□ 0.44
SCAF8-205ENST00000464628 C1QTNF8P60827 252 aa17.79■□□□□ 0.44
SCAF8-205ENST00000464628 MYOM1P52179 1685 aa17.79■□□□□ 0.44
SCAF8-205ENST00000464628 NUTM2FA1L443 756 aa17.77■□□□□ 0.44
SCAF8-205ENST00000464628 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
SCAF8-205ENST00000464628 TRPM3Q9HCF6 1732 aaPredicted RBP17.77■□□□□ 0.44
SCAF8-205ENST00000464628 TECPR2O15040 1411 aa17.76■□□□□ 0.43
SCAF8-205ENST00000464628 FAM83GA6ND36 823 aa17.76■□□□□ 0.43
SCAF8-205ENST00000464628 SPON1Q9HCB6 807 aa17.76■□□□□ 0.43
SCAF8-205ENST00000464628 PPP1R1BQ9UD71 204 aaPredicted RBP17.76■□□□□ 0.43
SCAF8-205ENST00000464628 ALS2Q96Q42 1657 aa17.75■□□□□ 0.43
SCAF8-205ENST00000464628 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
SCAF8-205ENST00000464628 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
SCAF8-205ENST00000464628 RGPD3A6NKT7 1758 aaPredicted RBP17.74■□□□□ 0.43
SCAF8-205ENST00000464628 RGPD4Q7Z3J3 1758 aa17.74■□□□□ 0.43
SCAF8-205ENST00000464628 KCNQ2O43526 872 aa17.74■□□□□ 0.43
SCAF8-205ENST00000464628 CEP350Q5VT06 3117 aa17.74■□□□□ 0.43
SCAF8-205ENST00000464628 TRIM37O94972 964 aa17.73■□□□□ 0.43
SCAF8-205ENST00000464628 SBNO1A3KN83 1393 aa17.73■□□□□ 0.43
SCAF8-205ENST00000464628 ROCK1Q13464 1354 aa17.73■□□□□ 0.43
SCAF8-205ENST00000464628 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
SCAF8-205ENST00000464628 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
SCAF8-205ENST00000464628 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
SCAF8-205ENST00000464628 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
SCAF8-205ENST00000464628 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
SCAF8-205ENST00000464628 ARHGEF10O15013 1369 aa17.7■□□□□ 0.42
SCAF8-205ENST00000464628 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
SCAF8-205ENST00000464628 APBA3O96018 575 aa17.7■□□□□ 0.42
SCAF8-205ENST00000464628 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
SCAF8-205ENST00000464628 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
SCAF8-205ENST00000464628 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
SCAF8-205ENST00000464628 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms