RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 A2ML1A8K2U0 1454 aa11.32□□□□□ -0.6
ACTB-208ENST00000464611 MYOM2P54296 1465 aa11.32□□□□□ -0.6
ACTB-208ENST00000464611 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
ACTB-208ENST00000464611 UGGT1Q9NYU2 1555 aa11.32□□□□□ -0.6
ACTB-208ENST00000464611 SETD1BQ9UPS6 1966 aaKnown RBP11.32□□□□□ -0.6
ACTB-208ENST00000464611 UBR1Q8IWV7 1749 aa11.32□□□□□ -0.6
ACTB-208ENST00000464611 CEBPAP49715 358 aaPredicted RBP11.31□□□□□ -0.6
ACTB-208ENST00000464611 PANK3Q9H999 370 aa11.31□□□□□ -0.6
ACTB-208ENST00000464611 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
ACTB-208ENST00000464611 SLC52A1Q9NWF4 448 aa11.31□□□□□ -0.6
ACTB-208ENST00000464611 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
ACTB-208ENST00000464611 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
ACTB-208ENST00000464611 DISP3Q9P2K9 1392 aa11.29□□□□□ -0.6
ACTB-208ENST00000464611 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
ACTB-208ENST00000464611 BLMP54132 1417 aaPredicted RBP11.29□□□□□ -0.6
ACTB-208ENST00000464611 TMEM131LA2VDJ0 1609 aa11.29□□□□□ -0.6
ACTB-208ENST00000464611 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
ACTB-208ENST00000464611 CCDC136Q96JN2 1154 aa11.29□□□□□ -0.6
ACTB-208ENST00000464611 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
ACTB-208ENST00000464611 RCAN3Q9UKA8 241 aa11.28□□□□□ -0.6
ACTB-208ENST00000464611 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
ACTB-208ENST00000464611 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.6
ACTB-208ENST00000464611 IRX6P78412 446 aaPredicted RBP11.27□□□□□ -0.61
ACTB-208ENST00000464611 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
ACTB-208ENST00000464611 ASXL1Q8IXJ9 1541 aa11.26□□□□□ -0.61
ACTB-208ENST00000464611 KCNA4P22459 653 aa11.26□□□□□ -0.61
ACTB-208ENST00000464611 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
ACTB-208ENST00000464611 SLIT1O75093 1534 aa11.25□□□□□ -0.61
ACTB-208ENST00000464611 SETBP1Q9Y6X0 1596 aa11.25□□□□□ -0.61
ACTB-208ENST00000464611 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
ACTB-208ENST00000464611 WDR43Q15061 677 aaKnown RBP eCLIP11.25□□□□□ -0.61
ACTB-208ENST00000464611 IFT172Q9UG01 1749 aa11.25□□□□□ -0.61
ACTB-208ENST00000464611 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
ACTB-208ENST00000464611 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
ACTB-208ENST00000464611 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
ACTB-208ENST00000464611 PPLO60437 1756 aa11.23□□□□□ -0.61
ACTB-208ENST00000464611 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
ACTB-208ENST00000464611 MS4A1P11836 297 aa11.23□□□□□ -0.61
ACTB-208ENST00000464611 IDI1Q13907 227 aa11.23□□□□□ -0.61
ACTB-208ENST00000464611 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
ACTB-208ENST00000464611 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.23□□□□□ -0.61
ACTB-208ENST00000464611 ARHGAP23Q9P227 1491 aa11.23□□□□□ -0.61
ACTB-208ENST00000464611 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
ACTB-208ENST00000464611 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
ACTB-208ENST00000464611 CC2D1BQ5T0F9 858 aaKnown RBP11.22□□□□□ -0.61
ACTB-208ENST00000464611 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
ACTB-208ENST00000464611 THEMISQ8N1K5 641 aaPredicted RBP11.22□□□□□ -0.61
ACTB-208ENST00000464611 TMEM2Q9UHN6 1383 aa11.21□□□□□ -0.61
ACTB-208ENST00000464611 ZFYVE9O95405 1425 aa11.2□□□□□ -0.62
ACTB-208ENST00000464611 RIMS2Q9UQ26 1411 aa11.2□□□□□ -0.62
ACTB-208ENST00000464611 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
ACTB-208ENST00000464611 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
ACTB-208ENST00000464611 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
ACTB-208ENST00000464611 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
ACTB-208ENST00000464611 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
ACTB-208ENST00000464611 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
ACTB-208ENST00000464611 EID1Q9Y6B2 187 aa11.18□□□□□ -0.62
ACTB-208ENST00000464611 DIP2AQ14689 1571 aa11.18□□□□□ -0.62
ACTB-208ENST00000464611 CENPJQ9HC77 1338 aaPredicted RBP11.17□□□□□ -0.62
ACTB-208ENST00000464611 ANP32AP39687 249 aaKnown RBP11.17□□□□□ -0.62
ACTB-208ENST00000464611 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
ACTB-208ENST00000464611 AAMPQ13685 434 aa11.16□□□□□ -0.62
ACTB-208ENST00000464611 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
ACTB-208ENST00000464611 MED14O60244 1454 aa11.16□□□□□ -0.62
ACTB-208ENST00000464611 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
ACTB-208ENST00000464611 ZNF521Q96K83 1311 aa11.15□□□□□ -0.62
ACTB-208ENST00000464611 GABBR2O75899 941 aa11.15□□□□□ -0.62
ACTB-208ENST00000464611 NSD2O96028 1365 aa11.15□□□□□ -0.63
ACTB-208ENST00000464611 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.63
ACTB-208ENST00000464611 NINLQ9Y2I6 1382 aa11.15□□□□□ -0.63
ACTB-208ENST00000464611 ADGRF5Q8IZF2 1346 aa11.14□□□□□ -0.63
ACTB-208ENST00000464611 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
ACTB-208ENST00000464611 ANKLE2Q86XL3 938 aa11.14□□□□□ -0.63
ACTB-208ENST00000464611 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
ACTB-208ENST00000464611 MYOM1P52179 1685 aa11.14□□□□□ -0.63
ACTB-208ENST00000464611 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
ACTB-208ENST00000464611 E9PSI1 815 aa11.13□□□□□ -0.63
ACTB-208ENST00000464611 TRMT2AQ8IZ69 625 aaKnown RBP11.13□□□□□ -0.63
ACTB-208ENST00000464611 HSPA2P54652 639 aa11.12□□□□□ -0.63
ACTB-208ENST00000464611 SLFN5Q08AF3 891 aa11.12□□□□□ -0.63
ACTB-208ENST00000464611 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
ACTB-208ENST00000464611 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
ACTB-208ENST00000464611 USP32Q8NFA0 1604 aa11.12□□□□□ -0.63
ACTB-208ENST00000464611 SETD1AO15047 1707 aaKnown RBP11.12□□□□□ -0.63
ACTB-208ENST00000464611 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
ACTB-208ENST00000464611 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
ACTB-208ENST00000464611 DUSP27Q5VZP5 1158 aa11.11□□□□□ -0.63
ACTB-208ENST00000464611 CFAP53Q96M91 514 aa11.11□□□□□ -0.63
ACTB-208ENST00000464611 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
ACTB-208ENST00000464611 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
ACTB-208ENST00000464611 CENPQQ7L2Z9 268 aaPredicted RBP11.1□□□□□ -0.63
ACTB-208ENST00000464611 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
ACTB-208ENST00000464611 IPO9Q96P70 1041 aaKnown RBP11.1□□□□□ -0.63
ACTB-208ENST00000464611 ALKQ9UM73 1620 aa11.09□□□□□ -0.63
ACTB-208ENST00000464611 ADGRB1O14514 1584 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 NWD1Q149M9 1564 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 NKTRP30414 1462 aaKnown RBP11.08□□□□□ -0.64
ACTB-208ENST00000464611 LTKP29376 864 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
ACTB-208ENST00000464611 CCDC27Q2M243 656 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms