RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 CCDC141Q6ZP82 1450 aa14.87□□□□□ -0.03
TNRC6A-205ENST00000464539 SETD1AO15047 1707 aaKnown RBP14.86□□□□□ -0.03
TNRC6A-205ENST00000464539 HSP90AA1P07900 732 aaKnown RBP14.86□□□□□ -0.03
TNRC6A-205ENST00000464539 HSP90AA2PQ14568 343 aaPredicted RBP14.86□□□□□ -0.03
TNRC6A-205ENST00000464539 CARD11Q9BXL7 1154 aa14.86□□□□□ -0.03
TNRC6A-205ENST00000464539 ERVK-7P63135 1459 aa14.85□□□□□ -0.03
TNRC6A-205ENST00000464539 XIRP1Q702N8 1843 aaKnown RBP14.85□□□□□ -0.03
TNRC6A-205ENST00000464539 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
TNRC6A-205ENST00000464539 RSPH4AQ5TD94 716 aa14.84□□□□□ -0.03
TNRC6A-205ENST00000464539 PNNQ9H307 717 aaKnown RBP14.84□□□□□ -0.03
TNRC6A-205ENST00000464539 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
TNRC6A-205ENST00000464539 ABCC3O15438 1527 aa14.83□□□□□ -0.03
TNRC6A-205ENST00000464539 ARHGAP23Q9P227 1491 aa14.83□□□□□ -0.04
TNRC6A-205ENST00000464539 UBR1Q8IWV7 1749 aa14.83□□□□□ -0.04
TNRC6A-205ENST00000464539 EIF3AQ14152 1382 aaKnown RBP14.82□□□□□ -0.04
TNRC6A-205ENST00000464539 VSIG10Q8N0Z9 540 aa14.82□□□□□ -0.04
TNRC6A-205ENST00000464539 SLIT1O75093 1534 aa14.82□□□□□ -0.04
TNRC6A-205ENST00000464539 TXNDC2Q86VQ3 553 aa14.82□□□□□ -0.04
TNRC6A-205ENST00000464539 POGKQ9P215 609 aa14.82□□□□□ -0.04
TNRC6A-205ENST00000464539 ROBO1Q9Y6N7 1651 aa14.81□□□□□ -0.04
TNRC6A-205ENST00000464539 UPF1Q92900 1129 aaKnown RBP eCLIP14.81□□□□□ -0.04
TNRC6A-205ENST00000464539 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 FSD2A1L4K1 749 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 LTKP29376 864 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 SKAP1Q86WV1 359 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 EID1Q9Y6B2 187 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 GOLGA6L3A6NEY3 463 aa14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 NAP1L5Q96NT1 182 aaPredicted RBP14.8□□□□□ -0.04
TNRC6A-205ENST00000464539 JCADQ9P266 1359 aa14.79□□□□□ -0.04
TNRC6A-205ENST00000464539 ZNF326Q5BKZ1 582 aaKnown RBP14.79□□□□□ -0.04
TNRC6A-205ENST00000464539 C20orf194Q5TEA3 1177 aa14.79□□□□□ -0.04
TNRC6A-205ENST00000464539 CAMSAP2Q08AD1 1489 aa14.79□□□□□ -0.04
TNRC6A-205ENST00000464539 ISY1Q9ULR0 285 aaKnown RBP14.78□□□□□ -0.04
TNRC6A-205ENST00000464539 USP19O94966 1318 aa14.78□□□□□ -0.04
TNRC6A-205ENST00000464539 TSPY4P0CV99 314 aa14.77□□□□□ -0.05
TNRC6A-205ENST00000464539 TSPY10P0CW01 314 aa14.77□□□□□ -0.05
TNRC6A-205ENST00000464539 MAPK8IP3Q9UPT6 1336 aa14.77□□□□□ -0.05
TNRC6A-205ENST00000464539 ARHGEF5Q12774 1597 aa14.76□□□□□ -0.05
TNRC6A-205ENST00000464539 ANTXR1Q9H6X2 564 aa14.76□□□□□ -0.05
TNRC6A-205ENST00000464539 ADGRL2O95490 1459 aa14.76□□□□□ -0.05
TNRC6A-205ENST00000464539 XRCC6P12956 609 aaKnown RBP eCLIP14.76□□□□□ -0.05
TNRC6A-205ENST00000464539 KCNA6P17658 529 aa14.76□□□□□ -0.05
TNRC6A-205ENST00000464539 EIF2AK4Q9P2K8 1649 aaKnown RBP14.75□□□□□ -0.05
TNRC6A-205ENST00000464539 DUSP27Q5VZP5 1158 aa14.75□□□□□ -0.05
TNRC6A-205ENST00000464539 ZNF772Q68DY9 489 aaPredicted RBP14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 PROSER2Q86WR7 435 aaPredicted RBP14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 VIRMAQ69YN4 1812 aaKnown RBP14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 PHLPP1O60346 1717 aa14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 CCDC144AA2RUR9 1427 aa14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 CENPJQ9HC77 1338 aaPredicted RBP14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 RGS3P49796 1198 aa14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 MRE11P49959 708 aa14.74□□□□□ -0.05
TNRC6A-205ENST00000464539 PRDM15P57071 1507 aaPredicted RBP14.73□□□□□ -0.05
TNRC6A-205ENST00000464539 NKTRP30414 1462 aaKnown RBP14.73□□□□□ -0.05
TNRC6A-205ENST00000464539 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
TNRC6A-205ENST00000464539 MROH1Q8NDA8 1641 aa14.73□□□□□ -0.05
TNRC6A-205ENST00000464539 MSH6P52701 1360 aa14.72□□□□□ -0.05
TNRC6A-205ENST00000464539 SPATA31A6Q5VVP1 1343 aa14.72□□□□□ -0.05
TNRC6A-205ENST00000464539 TPM2P07951 284 aa14.72□□□□□ -0.05
TNRC6A-205ENST00000464539 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
TNRC6A-205ENST00000464539 ZNF521Q96K83 1311 aa14.72□□□□□ -0.05
TNRC6A-205ENST00000464539 ARHGAP31Q2M1Z3 1444 aa14.71□□□□□ -0.05
TNRC6A-205ENST00000464539 MAST1Q9Y2H9 1570 aa14.71□□□□□ -0.05
TNRC6A-205ENST00000464539 AAMPQ13685 434 aa14.71□□□□□ -0.05
TNRC6A-205ENST00000464539 MEX3CQ5U5Q3 659 aaKnown RBP14.71□□□□□ -0.05
TNRC6A-205ENST00000464539 UPF2Q9HAU5 1272 aaKnown RBP14.71□□□□□ -0.05
TNRC6A-205ENST00000464539 CEP152O94986 1710 aa14.71□□□□□ -0.06
TNRC6A-205ENST00000464539 SLAIN2Q9P270 581 aa14.7□□□□□ -0.06
TNRC6A-205ENST00000464539 NINLQ9Y2I6 1382 aa14.7□□□□□ -0.06
TNRC6A-205ENST00000464539 TRMT2AQ8IZ69 625 aaKnown RBP14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 NWD1Q149M9 1564 aa14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 LRP6O75581 1613 aa14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 COL16A1Q07092 1604 aaPredicted RBP14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 MCM4P33991 863 aa14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 STAG3Q9UJ98 1225 aa14.69□□□□□ -0.06
TNRC6A-205ENST00000464539 CGNL1Q0VF96 1302 aa14.68□□□□□ -0.06
TNRC6A-205ENST00000464539 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
TNRC6A-205ENST00000464539 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
TNRC6A-205ENST00000464539 SLFN5Q08AF3 891 aa14.68□□□□□ -0.06
TNRC6A-205ENST00000464539 NGEFQ8N5V2 710 aa14.68□□□□□ -0.06
TNRC6A-205ENST00000464539 PDCL3Q9H2J4 239 aa14.68□□□□□ -0.06
TNRC6A-205ENST00000464539 RXRBP28702 533 aa14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 RBM33Q96EV2 1170 aaKnown RBP14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 TET3O43151 1660 aa14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 KDM5AP29375 1690 aaKnown RBP14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 PDE3AQ14432 1141 aa14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 MYH16Q9H6N6 1097 aa14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 ADAMTS8Q9UP79 889 aa14.67□□□□□ -0.06
TNRC6A-205ENST00000464539 ESPNB1AK53 854 aa14.66□□□□□ -0.06
TNRC6A-205ENST00000464539 SLC26A8Q96RN1 970 aa14.66□□□□□ -0.06
TNRC6A-205ENST00000464539 SLKQ9H2G2 1235 aaPredicted RBP14.66□□□□□ -0.06
TNRC6A-205ENST00000464539 GPRASP1Q5JY77 1395 aa14.66□□□□□ -0.06
TNRC6A-205ENST00000464539 TBC1D32Q96NH3 1257 aa14.65□□□□□ -0.06
TNRC6A-205ENST00000464539 CFAP65Q6ZU64 1925 aaKnown RBP14.65□□□□□ -0.06
TNRC6A-205ENST00000464539 LAMC1P11047 1609 aa14.65□□□□□ -0.06
TNRC6A-205ENST00000464539 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms