RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 MRPL50Q8N5N7 158 aaKnown RBP9.57□□□□□ -0.88
CLSTN1-204ENST00000464286 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
CLSTN1-204ENST00000464286 RABGEF1Q9UJ41 708 aa9.57□□□□□ -0.88
CLSTN1-204ENST00000464286 POLA1P09884 1462 aaPredicted RBP9.56□□□□□ -0.88
CLSTN1-204ENST00000464286 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
CLSTN1-204ENST00000464286 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
CLSTN1-204ENST00000464286 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
CLSTN1-204ENST00000464286 LRRIQ1Q96JM4 1722 aa9.56□□□□□ -0.88
CLSTN1-204ENST00000464286 INSRP06213 1382 aa9.55□□□□□ -0.88
CLSTN1-204ENST00000464286 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
CLSTN1-204ENST00000464286 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
CLSTN1-204ENST00000464286 NBPF3Q9H094 633 aa9.55□□□□□ -0.88
CLSTN1-204ENST00000464286 KIF14Q15058 1648 aa9.55□□□□□ -0.88
CLSTN1-204ENST00000464286 TEX14Q8IWB6 1497 aa9.54□□□□□ -0.88
CLSTN1-204ENST00000464286 MAP3K7O43318 606 aa9.54□□□□□ -0.88
CLSTN1-204ENST00000464286 KIAA1468Q9P260 1216 aa9.54□□□□□ -0.88
CLSTN1-204ENST00000464286 ZMYM4Q5VZL5 1548 aa9.54□□□□□ -0.88
CLSTN1-204ENST00000464286 SPATA31E1Q6ZUB1 1445 aa9.54□□□□□ -0.88
CLSTN1-204ENST00000464286 DNMT1P26358 1616 aaKnown RBP9.53□□□□□ -0.88
CLSTN1-204ENST00000464286 NESP48681 1621 aa9.53□□□□□ -0.88
CLSTN1-204ENST00000464286 ANKRD30BQ9BXX2 1392 aa9.53□□□□□ -0.88
CLSTN1-204ENST00000464286 GOLGA8CPA6NN73 597 aa9.53□□□□□ -0.88
CLSTN1-204ENST00000464286 L3MBTL2Q969R5 705 aa9.53□□□□□ -0.88
CLSTN1-204ENST00000464286 KIF7Q2M1P5 1343 aa9.53□□□□□ -0.88
CLSTN1-204ENST00000464286 BRD4O60885 1362 aaPredicted RBP9.52□□□□□ -0.88
CLSTN1-204ENST00000464286 ADGBQ8N7X0 1667 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 OSBPP22059 807 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 RALBP1Q15311 655 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 WNT2BQ93097 391 aa9.52□□□□□ -0.89
CLSTN1-204ENST00000464286 KIF15Q9NS87 1388 aa9.51□□□□□ -0.89
CLSTN1-204ENST00000464286 LAMC3Q9Y6N6 1575 aa9.51□□□□□ -0.89
CLSTN1-204ENST00000464286 PTPN5P54829 565 aa9.51□□□□□ -0.89
CLSTN1-204ENST00000464286 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
CLSTN1-204ENST00000464286 ITSN2Q9NZM3 1697 aa9.51□□□□□ -0.89
CLSTN1-204ENST00000464286 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
CLSTN1-204ENST00000464286 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
CLSTN1-204ENST00000464286 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
CLSTN1-204ENST00000464286 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
CLSTN1-204ENST00000464286 GAPVD1Q14C86 1478 aa9.5□□□□□ -0.89
CLSTN1-204ENST00000464286 PLEKHH2Q8IVE3 1493 aa9.5□□□□□ -0.89
CLSTN1-204ENST00000464286 EPRSP07814 1512 aaKnown RBP9.5□□□□□ -0.89
CLSTN1-204ENST00000464286 DAPK1P53355 1430 aa9.49□□□□□ -0.89
CLSTN1-204ENST00000464286 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
CLSTN1-204ENST00000464286 DENND4BO75064 1496 aaPredicted RBP9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 RAD54L2Q9Y4B4 1467 aa9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 IQGAP2Q13576 1575 aa9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
CLSTN1-204ENST00000464286 MBD5Q9P267 1494 aa9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 MYBBP1AQ9BQG0 1328 aaKnown RBP9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 WASHC2CQ9Y4E1 1318 aa9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 LRPPRCP42704 1394 aaKnown RBP9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 USP47Q96K76 1375 aa9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 RALGAPBQ86X10 1494 aa9.47□□□□□ -0.89
CLSTN1-204ENST00000464286 KDM5CP41229 1560 aa9.46□□□□□ -0.89
CLSTN1-204ENST00000464286 RRP1P56182 461 aaKnown RBP9.46□□□□□ -0.9
CLSTN1-204ENST00000464286 CDHR5Q9HBB8 845 aa9.46□□□□□ -0.9
CLSTN1-204ENST00000464286 SEPT9Q9UHD8 586 aaPredicted RBP9.46□□□□□ -0.9
CLSTN1-204ENST00000464286 KIAA1107Q9UPP5 1409 aa9.46□□□□□ -0.9
CLSTN1-204ENST00000464286 WDR62O43379 1518 aa9.46□□□□□ -0.9
CLSTN1-204ENST00000464286 NEFMP07197 916 aa9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 PRSS12P56730 875 aa9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 CERKQ8TCT0 537 aa9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 CDCA7LQ96GN5 454 aa9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
CLSTN1-204ENST00000464286 PRKCSHP14314 528 aaPredicted RBP9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 MLLT3P42568 568 aaPredicted RBP9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 ANKK1Q8NFD2 765 aa9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 RCAN3Q9UKA8 241 aa9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 ADGRL2O95490 1459 aa9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 MAGI3Q5TCQ9 1506 aa9.44□□□□□ -0.9
CLSTN1-204ENST00000464286 KDM6BO15054 1643 aa9.43□□□□□ -0.9
CLSTN1-204ENST00000464286 PDS5BQ9NTI5 1447 aa9.43□□□□□ -0.9
CLSTN1-204ENST00000464286 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
CLSTN1-204ENST00000464286 BACH2Q9BYV9 841 aa9.43□□□□□ -0.9
CLSTN1-204ENST00000464286 ABCC5O15440 1437 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 ANKRD30AQ9BXX3 1397 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 SOWAHBA6NEL2 793 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 BCAMP50895 628 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 NLRP13Q86W25 1043 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 E9PCH4 1651 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 CROCC2H7BZ55 1655 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 PBRM1Q86U86 1689 aa9.42□□□□□ -0.9
CLSTN1-204ENST00000464286 NBPF8Q3BBV2 869 aa9.41□□□□□ -0.9
CLSTN1-204ENST00000464286 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.41□□□□□ -0.9
CLSTN1-204ENST00000464286 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
CLSTN1-204ENST00000464286 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
CLSTN1-204ENST00000464286 ADCY10Q96PN6 1610 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms