RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 SLIT2O94813 1529 aa19.66■□□□□ 0.74
SNX17-205ENST00000464279 PTPN23Q9H3S7 1636 aa19.66■□□□□ 0.74
SNX17-205ENST00000464279 KRT27Q7Z3Y8 459 aa19.65■□□□□ 0.74
SNX17-205ENST00000464279 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
SNX17-205ENST00000464279 CHIC2Q9UKJ5 165 aa19.63■□□□□ 0.73
SNX17-205ENST00000464279 SENP3-EIF4A1A0A087X0R7 540 aa19.61■□□□□ 0.73
SNX17-205ENST00000464279 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
SNX17-205ENST00000464279 PXDNQ92626 1479 aa19.6■□□□□ 0.73
SNX17-205ENST00000464279 DCAF8L1A6NGE4 600 aa19.6■□□□□ 0.73
SNX17-205ENST00000464279 ONECUT3O60422 494 aaPredicted RBP19.58■□□□□ 0.72
SNX17-205ENST00000464279 VPS72Q15906 364 aa19.58■□□□□ 0.72
SNX17-205ENST00000464279 KANK4Q5T7N3 995 aaPredicted RBP19.58■□□□□ 0.72
SNX17-205ENST00000464279 IQGAP3Q86VI3 1631 aa19.56■□□□□ 0.72
SNX17-205ENST00000464279 DISP2A7MBM2 1401 aa19.56■□□□□ 0.72
SNX17-205ENST00000464279 ADGRL2O95490 1459 aa19.55■□□□□ 0.72
SNX17-205ENST00000464279 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
SNX17-205ENST00000464279 CCDC9Q9Y3X0 531 aaKnown RBP19.55■□□□□ 0.72
SNX17-205ENST00000464279 RGPD1P0DJD0 1748 aa19.54■□□□□ 0.72
SNX17-205ENST00000464279 A0A0G2JS52 829 aa19.54■□□□□ 0.72
SNX17-205ENST00000464279 MYT1Q01538 1121 aa19.54■□□□□ 0.72
SNX17-205ENST00000464279 XPCQ01831 940 aaPredicted RBP19.54■□□□□ 0.72
SNX17-205ENST00000464279 USP32Q8NFA0 1604 aa19.54■□□□□ 0.72
SNX17-205ENST00000464279 E9PCH4 1651 aa19.53■□□□□ 0.72
SNX17-205ENST00000464279 ESCO1Q5FWF5 840 aa19.52■□□□□ 0.72
SNX17-205ENST00000464279 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
SNX17-205ENST00000464279 ROBO2Q9HCK4 1378 aa19.5■□□□□ 0.71
SNX17-205ENST00000464279 NINLQ9Y2I6 1382 aa19.5■□□□□ 0.71
SNX17-205ENST00000464279 LOC105371045A0A1W2PR82 267 aa19.5■□□□□ 0.71
SNX17-205ENST00000464279 FOXO3O43524 673 aa19.5■□□□□ 0.71
SNX17-205ENST00000464279 ZNF784Q8NCA9 323 aaPredicted RBP19.5■□□□□ 0.71
SNX17-205ENST00000464279 PPP1R1BQ9UD71 204 aaPredicted RBP19.49■□□□□ 0.71
SNX17-205ENST00000464279 EZH2Q15910 746 aaKnown RBP19.48■□□□□ 0.71
SNX17-205ENST00000464279 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
SNX17-205ENST00000464279 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
SNX17-205ENST00000464279 ADGRB2O60241 1585 aa19.47■□□□□ 0.71
SNX17-205ENST00000464279 NWD2Q9ULI1 1742 aa19.46■□□□□ 0.71
SNX17-205ENST00000464279 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
SNX17-205ENST00000464279 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
SNX17-205ENST00000464279 CDC42BPGQ6DT37 1551 aa19.45■□□□□ 0.7
SNX17-205ENST00000464279 HFM1A2PYH4 1435 aa19.45■□□□□ 0.7
SNX17-205ENST00000464279 PRAG1Q86YV5 1406 aa19.45■□□□□ 0.7
SNX17-205ENST00000464279 C1QTNF8P60827 252 aa19.45■□□□□ 0.7
SNX17-205ENST00000464279 SPATA31A3Q5VYP0 1347 aa19.45■□□□□ 0.7
SNX17-205ENST00000464279 TNS1Q9HBL0 1735 aaKnown RBP19.45■□□□□ 0.7
SNX17-205ENST00000464279 FAM98CQ17RN3 349 aaKnown RBP19.44■□□□□ 0.7
SNX17-205ENST00000464279 PARD3Q8TEW0 1356 aa19.43■□□□□ 0.7
SNX17-205ENST00000464279 CAMKK2Q96RR4 588 aa19.42■□□□□ 0.7
SNX17-205ENST00000464279 SPON1Q9HCB6 807 aa19.42■□□□□ 0.7
SNX17-205ENST00000464279 FAM182BQ5T319 152 aa19.41■□□□□ 0.7
SNX17-205ENST00000464279 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
SNX17-205ENST00000464279 NEXMIFQ5QGS0 1516 aa19.4■□□□□ 0.7
SNX17-205ENST00000464279 CAMTA1Q9Y6Y1 1673 aa19.38■□□□□ 0.69
SNX17-205ENST00000464279 KCNQ2O43526 872 aa19.36■□□□□ 0.69
SNX17-205ENST00000464279 NBPF8Q3BBV2 869 aa19.36■□□□□ 0.69
SNX17-205ENST00000464279 NBPF14Q5TI25 921 aa19.36■□□□□ 0.69
SNX17-205ENST00000464279 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
SNX17-205ENST00000464279 CABLES1Q8TDN4 633 aa19.35■□□□□ 0.69
SNX17-205ENST00000464279 NUTM2FA1L443 756 aa19.33■□□□□ 0.68
SNX17-205ENST00000464279 TRIM37O94972 964 aa19.33■□□□□ 0.68
SNX17-205ENST00000464279 KIF1AQ12756 1690 aa19.33■□□□□ 0.68
SNX17-205ENST00000464279 RREB1Q92766 1687 aa19.33■□□□□ 0.68
SNX17-205ENST00000464279 NAIPQ13075 1403 aa19.33■□□□□ 0.68
SNX17-205ENST00000464279 NRAPQ86VF7 1730 aa19.32■□□□□ 0.68
SNX17-205ENST00000464279 PLEKHG5O94827 1062 aa19.32■□□□□ 0.68
SNX17-205ENST00000464279 APBA3O96018 575 aa19.32■□□□□ 0.68
SNX17-205ENST00000464279 KRT28Q7Z3Y7 464 aa19.32■□□□□ 0.68
SNX17-205ENST00000464279 NUP188Q5SRE5 1749 aa19.31■□□□□ 0.68
SNX17-205ENST00000464279 FAM83GA6ND36 823 aa19.31■□□□□ 0.68
SNX17-205ENST00000464279 ABCA3Q99758 1704 aa19.31■□□□□ 0.68
SNX17-205ENST00000464279 NUP155O75694 1391 aa19.31■□□□□ 0.68
SNX17-205ENST00000464279 THSD7AQ9UPZ6 1657 aa19.3■□□□□ 0.68
SNX17-205ENST00000464279 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
SNX17-205ENST00000464279 BTG4Q9NY30 223 aa19.28■□□□□ 0.68
SNX17-205ENST00000464279 ARHGEF10O15013 1369 aa19.28■□□□□ 0.68
SNX17-205ENST00000464279 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
SNX17-205ENST00000464279 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
SNX17-205ENST00000464279 VGFO15240 615 aaPredicted RBP19.26■□□□□ 0.67
SNX17-205ENST00000464279 PSME1Q06323 249 aa19.26■□□□□ 0.67
SNX17-205ENST00000464279 FAM50AQ14320 339 aaKnown RBP19.26■□□□□ 0.67
SNX17-205ENST00000464279 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
SNX17-205ENST00000464279 SBNO1A3KN83 1393 aa19.24■□□□□ 0.67
SNX17-205ENST00000464279 CLTCL1P53675 1640 aa19.24■□□□□ 0.67
SNX17-205ENST00000464279 NRKQ7Z2Y5 1582 aa19.23■□□□□ 0.67
SNX17-205ENST00000464279 GIGYF1O75420 1035 aaPredicted RBP19.22■□□□□ 0.67
SNX17-205ENST00000464279 RRBP1Q9P2E9 1410 aaKnown RBP19.22■□□□□ 0.67
SNX17-205ENST00000464279 COL14A1Q05707 1796 aaKnown RBP19.21■□□□□ 0.67
SNX17-205ENST00000464279 FMN2Q9NZ56 1722 aa19.21■□□□□ 0.67
SNX17-205ENST00000464279 APLP2Q06481 763 aa19.2■□□□□ 0.66
SNX17-205ENST00000464279 UTRNP46939 3433 aa19.19■□□□□ 0.66
SNX17-205ENST00000464279 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
SNX17-205ENST00000464279 CEP350Q5VT06 3117 aa19.18■□□□□ 0.66
SNX17-205ENST00000464279 WAPLQ7Z5K2 1190 aa19.18■□□□□ 0.66
SNX17-205ENST00000464279 TECPR2O15040 1411 aa19.17■□□□□ 0.66
SNX17-205ENST00000464279 ROCK1Q13464 1354 aa19.17■□□□□ 0.66
SNX17-205ENST00000464279 CHD4Q14839 1912 aa19.16■□□□□ 0.66
SNX17-205ENST00000464279 KIF1BO60333 1816 aa19.16■□□□□ 0.66
SNX17-205ENST00000464279 NRXN1Q9ULB1 1477 aa19.16■□□□□ 0.66
SNX17-205ENST00000464279 MYOM1P52179 1685 aa19.15■□□□□ 0.66
SNX17-205ENST00000464279 SPATA31A1Q5TZJ5 1347 aa19.14■□□□□ 0.65
SNX17-205ENST00000464279 STK26Q9P289 416 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms