RNA–Protein interactions for RNA: ENST00000464029.5

SYPL1-204, Transcript of synaptophysin like 1, humanhuman

TSL 2

Gene SYPL1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-204ENST00000464029 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
SYPL1-204ENST00000464029 KDM2AQ9Y2K7 1162 aa11.63□□□□□ -0.55
SYPL1-204ENST00000464029 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
SYPL1-204ENST00000464029 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
SYPL1-204ENST00000464029 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
SYPL1-204ENST00000464029 WNT7AO00755 349 aa11.6□□□□□ -0.55
SYPL1-204ENST00000464029 AXIN1O15169 862 aa11.6□□□□□ -0.55
SYPL1-204ENST00000464029 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
SYPL1-204ENST00000464029 IRF6O14896 467 aa11.59□□□□□ -0.55
SYPL1-204ENST00000464029 KDM4AO75164 1064 aa11.59□□□□□ -0.55
SYPL1-204ENST00000464029 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.56
SYPL1-204ENST00000464029 TRIM32Q13049 653 aa11.58□□□□□ -0.56
SYPL1-204ENST00000464029 TREML4Q6UXN2 200 aa11.58□□□□□ -0.56
SYPL1-204ENST00000464029 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
SYPL1-204ENST00000464029 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
SYPL1-204ENST00000464029 USP46P62068 366 aa11.56□□□□□ -0.56
SYPL1-204ENST00000464029 SNIP1Q8TAD8 396 aaKnown RBP11.56□□□□□ -0.56
SYPL1-204ENST00000464029 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
SYPL1-204ENST00000464029 MINK1Q8N4C8 1332 aaPredicted RBP11.56□□□□□ -0.56
SYPL1-204ENST00000464029 SMPD1P17405 629 aa11.55□□□□□ -0.56
SYPL1-204ENST00000464029 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
SYPL1-204ENST00000464029 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SYPL1-204ENST00000464029 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
SYPL1-204ENST00000464029 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.57
SYPL1-204ENST00000464029 HOXA2O43364 376 aa11.52□□□□□ -0.57
SYPL1-204ENST00000464029 TULP1O00294 542 aaPredicted RBP11.51□□□□□ -0.57
SYPL1-204ENST00000464029 J3QL48 77 aa11.49□□□□□ -0.57
SYPL1-204ENST00000464029 CCDC102AQ96A19 550 aa11.49□□□□□ -0.57
SYPL1-204ENST00000464029 REPIN1Q9BWE0 567 aaKnown RBP11.49□□□□□ -0.57
SYPL1-204ENST00000464029 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
SYPL1-204ENST00000464029 SKOR1P84550 965 aa11.47□□□□□ -0.57
SYPL1-204ENST00000464029 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
SYPL1-204ENST00000464029 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
SYPL1-204ENST00000464029 WNT7BP56706 349 aa11.46□□□□□ -0.57
SYPL1-204ENST00000464029 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
SYPL1-204ENST00000464029 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
SYPL1-204ENST00000464029 WFS1O76024 890 aa11.45□□□□□ -0.58
SYPL1-204ENST00000464029 CLCN1P35523 988 aa11.45□□□□□ -0.58
SYPL1-204ENST00000464029 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
SYPL1-204ENST00000464029 JUNDP17535 347 aa11.44□□□□□ -0.58
SYPL1-204ENST00000464029 NFX1Q12986 1120 aaKnown RBP11.44□□□□□ -0.58
SYPL1-204ENST00000464029 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
SYPL1-204ENST00000464029 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
SYPL1-204ENST00000464029 HPS1Q92902 700 aa11.43□□□□□ -0.58
SYPL1-204ENST00000464029 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
SYPL1-204ENST00000464029 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
SYPL1-204ENST00000464029 SNRPBP14678 240 aaKnown RBP11.4□□□□□ -0.58
SYPL1-204ENST00000464029 NUTM1Q86Y26 1132 aa11.4□□□□□ -0.58
SYPL1-204ENST00000464029 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
SYPL1-204ENST00000464029 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
SYPL1-204ENST00000464029 PTCRAQ6ISU1 281 aaPredicted RBP11.37□□□□□ -0.59
SYPL1-204ENST00000464029 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
SYPL1-204ENST00000464029 SIAH2O43255 324 aa11.36□□□□□ -0.59
SYPL1-204ENST00000464029 WIPF1O43516 503 aa11.36□□□□□ -0.59
SYPL1-204ENST00000464029 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
SYPL1-204ENST00000464029 ALDH1A1P00352 501 aa11.35□□□□□ -0.59
SYPL1-204ENST00000464029 FDX1P10109 184 aa11.35□□□□□ -0.59
SYPL1-204ENST00000464029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
SYPL1-204ENST00000464029 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
SYPL1-204ENST00000464029 TERTO14746 1132 aaKnown RBP11.33□□□□□ -0.6
SYPL1-204ENST00000464029 LCE2CQ5TA81 110 aa11.33□□□□□ -0.6
SYPL1-204ENST00000464029 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
SYPL1-204ENST00000464029 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
SYPL1-204ENST00000464029 EHBP1Q8NDI1 1231 aa11.32□□□□□ -0.6
SYPL1-204ENST00000464029 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
SYPL1-204ENST00000464029 CCNYL3P0C7X3 344 aa11.31□□□□□ -0.6
SYPL1-204ENST00000464029 MS4A1P11836 297 aa11.31□□□□□ -0.6
SYPL1-204ENST00000464029 SH3BP2P78314 561 aa11.3□□□□□ -0.6
SYPL1-204ENST00000464029 PTPRNQ16849 979 aa11.29□□□□□ -0.6
SYPL1-204ENST00000464029 ABCC9O60706 1549 aa11.29□□□□□ -0.6
SYPL1-204ENST00000464029 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
SYPL1-204ENST00000464029 EVA1BQ9NVM1 165 aa11.28□□□□□ -0.6
SYPL1-204ENST00000464029 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
SYPL1-204ENST00000464029 NDUFV2P19404 249 aa11.27□□□□□ -0.61
SYPL1-204ENST00000464029 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
SYPL1-204ENST00000464029 AMHR2Q16671 573 aa11.26□□□□□ -0.61
SYPL1-204ENST00000464029 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
SYPL1-204ENST00000464029 UNC93B1Q9H1C4 597 aa11.26□□□□□ -0.61
SYPL1-204ENST00000464029 WASF2Q9Y6W5 498 aa11.26□□□□□ -0.61
SYPL1-204ENST00000464029 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
SYPL1-204ENST00000464029 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
SYPL1-204ENST00000464029 DESI1Q6ICB0 168 aa11.24□□□□□ -0.61
SYPL1-204ENST00000464029 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
SYPL1-204ENST00000464029 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
SYPL1-204ENST00000464029 SPDYE5A6NIY4 337 aa11.23□□□□□ -0.61
SYPL1-204ENST00000464029 ZMYND10O75800 440 aa11.23□□□□□ -0.61
SYPL1-204ENST00000464029 BMP1P13497 986 aa11.23□□□□□ -0.61
SYPL1-204ENST00000464029 MTMR2Q13614 643 aa11.23□□□□□ -0.61
SYPL1-204ENST00000464029 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
SYPL1-204ENST00000464029 BAP1Q92560 729 aa11.22□□□□□ -0.61
SYPL1-204ENST00000464029 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
SYPL1-204ENST00000464029 MPNDQ8N594 471 aa11.21□□□□□ -0.61
SYPL1-204ENST00000464029 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
SYPL1-204ENST00000464029 GJA5P36382 358 aa11.2□□□□□ -0.62
SYPL1-204ENST00000464029 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
SYPL1-204ENST00000464029 ZNF511Q8NB15 262 aa11.2□□□□□ -0.62
SYPL1-204ENST00000464029 VARSP26640 1264 aaKnown RBP11.19□□□□□ -0.62
SYPL1-204ENST00000464029 NPAS3Q8IXF0 933 aa11.18□□□□□ -0.62
SYPL1-204ENST00000464029 SLC16A10Q8TF71 515 aa11.18□□□□□ -0.62
SYPL1-204ENST00000464029 BEGAINQ9BUH8 593 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms