RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 CNGB1Q14028 1251 aaPredicted RBP26■■□□□ 1.75
CCDC78-206ENST00000463539 YTHDC1Q96MU7 727 aaKnown RBP26■■□□□ 1.75
CCDC78-206ENST00000463539 SRPK2P78362 688 aaKnown RBP25.98■■□□□ 1.75
CCDC78-206ENST00000463539 CABP2Q9NPB3 220 aa25.98■■□□□ 1.75
CCDC78-206ENST00000463539 PTPRUQ92729 1446 aa25.98■■□□□ 1.75
CCDC78-206ENST00000463539 KTN1Q86UP2 1357 aaKnown RBP25.98■■□□□ 1.75
CCDC78-206ENST00000463539 ROBO2Q9HCK4 1378 aa25.98■■□□□ 1.75
CCDC78-206ENST00000463539 KDM4FA0A1W2PPD8 638 aa25.98■■□□□ 1.75
CCDC78-206ENST00000463539 TMC1Q8TDI8 760 aa25.97■■□□□ 1.75
CCDC78-206ENST00000463539 KNSTRNQ9Y448 316 aa25.96■■□□□ 1.75
CCDC78-206ENST00000463539 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
CCDC78-206ENST00000463539 AMOTL2Q9Y2J4 779 aa25.95■■□□□ 1.74
CCDC78-206ENST00000463539 ATAD2Q6PL18 1390 aa25.95■■□□□ 1.74
CCDC78-206ENST00000463539 RALBP1Q15311 655 aa25.94■■□□□ 1.74
CCDC78-206ENST00000463539 CDK19Q9BWU1 502 aa25.93■■□□□ 1.74
CCDC78-206ENST00000463539 PTCH1Q13635 1447 aa25.93■■□□□ 1.74
CCDC78-206ENST00000463539 NINLQ9Y2I6 1382 aa25.93■■□□□ 1.74
CCDC78-206ENST00000463539 NPHP4O75161 1426 aaPredicted RBP25.92■■□□□ 1.74
CCDC78-206ENST00000463539 SLC12A5Q9H2X9 1139 aa25.92■■□□□ 1.74
CCDC78-206ENST00000463539 PARD3Q8TEW0 1356 aa25.9■■□□□ 1.74
CCDC78-206ENST00000463539 CC2D1BQ5T0F9 858 aaKnown RBP25.9■■□□□ 1.74
CCDC78-206ENST00000463539 XRN1Q8IZH2 1706 aaKnown RBP25.88■■□□□ 1.73
CCDC78-206ENST00000463539 WASLO00401 505 aaPredicted RBP25.88■■□□□ 1.73
CCDC78-206ENST00000463539 AMER1Q5JTC6 1135 aaPredicted RBP25.88■■□□□ 1.73
CCDC78-206ENST00000463539 CARD14Q9BXL6 1004 aa25.87■■□□□ 1.73
CCDC78-206ENST00000463539 MRS2Q9HD23 443 aa25.87■■□□□ 1.73
CCDC78-206ENST00000463539 MYBBP1AQ9BQG0 1328 aaKnown RBP25.87■■□□□ 1.73
CCDC78-206ENST00000463539 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
CCDC78-206ENST00000463539 ANKRD36BQ8N2N9 1353 aa25.87■■□□□ 1.73
CCDC78-206ENST00000463539 NPC1L1Q9UHC9 1359 aa25.85■■□□□ 1.73
CCDC78-206ENST00000463539 CCDC184Q52MB2 194 aa25.85■■□□□ 1.73
CCDC78-206ENST00000463539 NSD3Q9BZ95 1437 aa25.84■■□□□ 1.73
CCDC78-206ENST00000463539 ADGRB2O60241 1585 aa25.84■■□□□ 1.73
CCDC78-206ENST00000463539 KCNA6P17658 529 aa25.84■■□□□ 1.73
CCDC78-206ENST00000463539 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.8■■□□□ 1.72
CCDC78-206ENST00000463539 CENPBP07199 599 aaPredicted RBP25.8■■□□□ 1.72
CCDC78-206ENST00000463539 A0A1W2PP64 1363 aa25.8■■□□□ 1.72
CCDC78-206ENST00000463539 TERF2IPQ9NYB0 399 aa25.79■■□□□ 1.72
CCDC78-206ENST00000463539 NLRP13Q86W25 1043 aa25.78■■□□□ 1.72
CCDC78-206ENST00000463539 CABP1Q9NZU7 370 aa25.78■■□□□ 1.72
CCDC78-206ENST00000463539 BRD4O60885 1362 aaPredicted RBP25.78■■□□□ 1.72
CCDC78-206ENST00000463539 HSPA2P54652 639 aa25.77■■□□□ 1.72
CCDC78-206ENST00000463539 LMTK3Q96Q04 1460 aa25.76■■□□□ 1.71
CCDC78-206ENST00000463539 HDGFL2Q7Z4V5 671 aaPredicted RBP25.76■■□□□ 1.71
CCDC78-206ENST00000463539 NUDT16Q96DE0 195 aaKnown RBP25.76■■□□□ 1.71
CCDC78-206ENST00000463539 CD163L1Q9NR16 1453 aa25.76■■□□□ 1.71
CCDC78-206ENST00000463539 USP32Q8NFA0 1604 aa25.75■■□□□ 1.71
CCDC78-206ENST00000463539 CHD2O14647 1828 aaKnown RBP25.75■■□□□ 1.71
CCDC78-206ENST00000463539 ATP7BP35670 1465 aa25.75■■□□□ 1.71
CCDC78-206ENST00000463539 CGNL1Q0VF96 1302 aa25.75■■□□□ 1.71
CCDC78-206ENST00000463539 PPIP5K1Q6PFW1 1433 aa25.75■■□□□ 1.71
CCDC78-206ENST00000463539 CCDC61Q9Y6R9 512 aa25.74■■□□□ 1.71
CCDC78-206ENST00000463539 PRR36Q9H6K5 1346 aa25.71■■□□□ 1.71
CCDC78-206ENST00000463539 FAM9BQ8IZU0 186 aa25.7■■□□□ 1.71
CCDC78-206ENST00000463539 NSD2O96028 1365 aa25.7■■□□□ 1.7
CCDC78-206ENST00000463539 NWD1Q149M9 1564 aa25.69■■□□□ 1.7
CCDC78-206ENST00000463539 PPP2R1AP30153 589 aa25.68■■□□□ 1.7
CCDC78-206ENST00000463539 CPSF1Q10570 1443 aaKnown RBP25.66■■□□□ 1.7
CCDC78-206ENST00000463539 CDC42BPGQ6DT37 1551 aa25.66■■□□□ 1.7
CCDC78-206ENST00000463539 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
CCDC78-206ENST00000463539 NUTM2FA1L443 756 aa25.65■■□□□ 1.7
CCDC78-206ENST00000463539 PNISRQ8TF01 805 aaKnown RBP25.65■■□□□ 1.7
CCDC78-206ENST00000463539 TOPAZ1Q8N9V7 1692 aa25.63■■□□□ 1.69
CCDC78-206ENST00000463539 NKTRP30414 1462 aaKnown RBP25.62■■□□□ 1.69
CCDC78-206ENST00000463539 ADGRL3Q9HAR2 1447 aa25.62■■□□□ 1.69
CCDC78-206ENST00000463539 ANKARQ7Z5J8 1434 aa25.62■■□□□ 1.69
CCDC78-206ENST00000463539 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
CCDC78-206ENST00000463539 EDC4Q6P2E9 1401 aaKnown RBP25.6■■□□□ 1.69
CCDC78-206ENST00000463539 NALCNQ8IZF0 1738 aa25.6■■□□□ 1.69
CCDC78-206ENST00000463539 PLEKHG3A1L390 1219 aa25.6■■□□□ 1.69
CCDC78-206ENST00000463539 HNRNPUQ00839 825 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCDC78-206ENST00000463539 C14orf37Q86TY3 774 aa25.58■■□□□ 1.69
CCDC78-206ENST00000463539 ZNF692Q9BU19 519 aaPredicted RBP25.58■■□□□ 1.69
CCDC78-206ENST00000463539 FYB1O15117 783 aa25.58■■□□□ 1.68
CCDC78-206ENST00000463539 PROSER2Q86WR7 435 aaPredicted RBP25.57■■□□□ 1.68
CCDC78-206ENST00000463539 GGNBP2Q9H3C7 697 aa25.57■■□□□ 1.68
CCDC78-206ENST00000463539 FMN2Q9NZ56 1722 aa25.57■■□□□ 1.68
CCDC78-206ENST00000463539 TNNT2P45379 298 aaPredicted RBP25.56■■□□□ 1.68
CCDC78-206ENST00000463539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.56■■□□□ 1.68
CCDC78-206ENST00000463539 ACEP12821 1306 aa25.56■■□□□ 1.68
CCDC78-206ENST00000463539 ITSN1Q15811 1721 aa25.55■■□□□ 1.68
CCDC78-206ENST00000463539 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
CCDC78-206ENST00000463539 MON2Q7Z3U7 1717 aa25.53■■□□□ 1.68
CCDC78-206ENST00000463539 AKAP12Q02952 1782 aa25.53■■□□□ 1.68
CCDC78-206ENST00000463539 KIF20BQ96Q89 1820 aa25.51■■□□□ 1.67
CCDC78-206ENST00000463539 PMFBP1Q8TBY8 1022 aa25.51■■□□□ 1.67
CCDC78-206ENST00000463539 POLR3AO14802 1390 aaPredicted RBP25.5■■□□□ 1.67
CCDC78-206ENST00000463539 USP6P35125 1406 aa25.5■■□□□ 1.67
CCDC78-206ENST00000463539 ANKRD26Q9UPS8 1709 aa25.49■■□□□ 1.67
CCDC78-206ENST00000463539 NGDNQ8NEJ9 315 aaKnown RBP25.49■■□□□ 1.67
CCDC78-206ENST00000463539 NME9Q86XW9 330 aa25.48■■□□□ 1.67
CCDC78-206ENST00000463539 TMEM94Q12767 1356 aa25.48■■□□□ 1.67
CCDC78-206ENST00000463539 NRKQ7Z2Y5 1582 aa25.47■■□□□ 1.67
CCDC78-206ENST00000463539 NCOA3Q9Y6Q9 1424 aa25.46■■□□□ 1.67
CCDC78-206ENST00000463539 TTC21BQ7Z4L5 1316 aa25.46■■□□□ 1.67
CCDC78-206ENST00000463539 WDR43Q15061 677 aaKnown RBP eCLIP25.46■■□□□ 1.67
CCDC78-206ENST00000463539 C19orf44Q9H6X5 657 aa25.46■■□□□ 1.67
CCDC78-206ENST00000463539 STRCP1A6NGW2 1772 aa25.45■■□□□ 1.67
CCDC78-206ENST00000463539 INSRP06213 1382 aa25.45■■□□□ 1.66
CCDC78-206ENST00000463539 MTHFSP49914 203 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms