RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 WAPLQ7Z5K2 1190 aa17.17■□□□□ 0.34
VAPB-203ENST00000463370 PUS7Q96PZ0 661 aaKnown RBP17.16■□□□□ 0.34
VAPB-203ENST00000463370 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
VAPB-203ENST00000463370 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
VAPB-203ENST00000463370 METP08581 1390 aa17.15■□□□□ 0.34
VAPB-203ENST00000463370 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
VAPB-203ENST00000463370 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
VAPB-203ENST00000463370 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
VAPB-203ENST00000463370 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
VAPB-203ENST00000463370 INSRP06213 1382 aa17.13■□□□□ 0.33
VAPB-203ENST00000463370 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
VAPB-203ENST00000463370 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
VAPB-203ENST00000463370 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
VAPB-203ENST00000463370 CDCA7LQ96GN5 454 aa17.12■□□□□ 0.33
VAPB-203ENST00000463370 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
VAPB-203ENST00000463370 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
VAPB-203ENST00000463370 CDK19Q9BWU1 502 aa17.11■□□□□ 0.33
VAPB-203ENST00000463370 ABCC11Q96J66 1382 aa17.1■□□□□ 0.33
VAPB-203ENST00000463370 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
VAPB-203ENST00000463370 LTKP29376 864 aa17.1■□□□□ 0.33
VAPB-203ENST00000463370 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
VAPB-203ENST00000463370 TXNDC2Q86VQ3 553 aa17.09■□□□□ 0.33
VAPB-203ENST00000463370 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
VAPB-203ENST00000463370 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
VAPB-203ENST00000463370 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.33
VAPB-203ENST00000463370 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
VAPB-203ENST00000463370 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
VAPB-203ENST00000463370 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
VAPB-203ENST00000463370 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
VAPB-203ENST00000463370 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
VAPB-203ENST00000463370 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
VAPB-203ENST00000463370 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
VAPB-203ENST00000463370 ADAMTS13Q76LX8 1427 aa17.05■□□□□ 0.32
VAPB-203ENST00000463370 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
VAPB-203ENST00000463370 C3P01024 1663 aa17.05■□□□□ 0.32
VAPB-203ENST00000463370 PDE3BQ13370 1112 aa17.04■□□□□ 0.32
VAPB-203ENST00000463370 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
VAPB-203ENST00000463370 MTHFSP49914 203 aa17.03■□□□□ 0.32
VAPB-203ENST00000463370 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
VAPB-203ENST00000463370 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.31
VAPB-203ENST00000463370 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 TECPR2O15040 1411 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 FYB1O15117 783 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 NSD2O96028 1365 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 WASLO00401 505 aaPredicted RBP17.01■□□□□ 0.31
VAPB-203ENST00000463370 APAF1O14727 1248 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
VAPB-203ENST00000463370 ERICH6BQ5W0A0 696 aa17■□□□□ 0.31
VAPB-203ENST00000463370 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
VAPB-203ENST00000463370 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
VAPB-203ENST00000463370 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
VAPB-203ENST00000463370 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
VAPB-203ENST00000463370 CPS1P31327 1500 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 SHPRHQ149N8 1683 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 B4GALNT3Q6L9W6 998 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
VAPB-203ENST00000463370 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 SIRT1Q96EB6 747 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 MED14O60244 1454 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 ARHGAP23Q9P227 1491 aa16.97■□□□□ 0.31
VAPB-203ENST00000463370 EID1Q9Y6B2 187 aa16.96■□□□□ 0.31
VAPB-203ENST00000463370 SLIT1O75093 1534 aa16.96■□□□□ 0.31
VAPB-203ENST00000463370 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
VAPB-203ENST00000463370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
VAPB-203ENST00000463370 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
VAPB-203ENST00000463370 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
VAPB-203ENST00000463370 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
VAPB-203ENST00000463370 PPIP5K1Q6PFW1 1433 aa16.95■□□□□ 0.3
VAPB-203ENST00000463370 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
VAPB-203ENST00000463370 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
VAPB-203ENST00000463370 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
VAPB-203ENST00000463370 PRR36Q9H6K5 1346 aa16.94■□□□□ 0.3
VAPB-203ENST00000463370 FBLN1P23142 703 aa16.94■□□□□ 0.3
VAPB-203ENST00000463370 ATP7BP35670 1465 aa16.93■□□□□ 0.3
VAPB-203ENST00000463370 GOLGA2Q08379 1002 aa16.93■□□□□ 0.3
VAPB-203ENST00000463370 THEMISQ8N1K5 641 aaPredicted RBP16.93■□□□□ 0.3
VAPB-203ENST00000463370 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
VAPB-203ENST00000463370 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
VAPB-203ENST00000463370 CFAP53Q96M91 514 aa16.92■□□□□ 0.3
VAPB-203ENST00000463370 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
VAPB-203ENST00000463370 RRP7AQ9Y3A4 280 aaKnown RBP16.91■□□□□ 0.3
VAPB-203ENST00000463370 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
VAPB-203ENST00000463370 PLIN1O60240 522 aa16.91■□□□□ 0.3
VAPB-203ENST00000463370 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
VAPB-203ENST00000463370 CCDC61Q9Y6R9 512 aa16.91■□□□□ 0.3
VAPB-203ENST00000463370 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
VAPB-203ENST00000463370 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
VAPB-203ENST00000463370 NEUROD2Q15784 382 aa16.89■□□□□ 0.29
VAPB-203ENST00000463370 NME9Q86XW9 330 aa16.89■□□□□ 0.29
VAPB-203ENST00000463370 RUNDC1Q96C34 613 aa16.89■□□□□ 0.29
VAPB-203ENST00000463370 TBX22Q9Y458 520 aa16.89■□□□□ 0.29
VAPB-203ENST00000463370 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
VAPB-203ENST00000463370 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
VAPB-203ENST00000463370 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
VAPB-203ENST00000463370 TRMT2AQ8IZ69 625 aaKnown RBP16.88■□□□□ 0.29
VAPB-203ENST00000463370 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
VAPB-203ENST00000463370 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms