RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 SPINK5Q9NQ38 1064 aaPredicted RBP4.49□□□□□ -1.69
COL8A1-204ENST00000462604 COG6Q9Y2V7 657 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 CLTCL1P53675 1640 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 SHROOM2Q13796 1616 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 MYO5CQ9NQX4 1742 aa4.49□□□□□ -1.69
COL8A1-204ENST00000462604 VWDEQ8N2E2 1590 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 ATP7AQ04656 1500 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 KIF3BO15066 747 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 SLC4A2P04920 1241 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 CT47B1P0C2W7 299 aaPredicted RBP4.48□□□□□ -1.69
COL8A1-204ENST00000462604 RARSP54136 660 aaKnown RBP4.48□□□□□ -1.69
COL8A1-204ENST00000462604 CCDC27Q2M243 656 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 FTSJ3Q8IY81 847 aaKnown RBP4.48□□□□□ -1.69
COL8A1-204ENST00000462604 FAM43AQ8N2R8 423 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 AFAP1Q8N556 730 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 PANK1Q8TE04 598 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 CARD14Q9BXL6 1004 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 ANO8Q9HCE9 1232 aaPredicted RBP4.48□□□□□ -1.69
COL8A1-204ENST00000462604 NSD2O96028 1365 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 IQSEC2Q5JU85 1478 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 NRXN1Q9ULB1 1477 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 TET3O43151 1660 aa4.48□□□□□ -1.69
COL8A1-204ENST00000462604 KDM5AP29375 1690 aaKnown RBP4.48□□□□□ -1.69
COL8A1-204ENST00000462604 USP19O94966 1318 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 ADGRF5Q8IZF2 1346 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 LMTK2Q8IWU2 1503 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 SPHKAPQ2M3C7 1700 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 PAXIP1Q6ZW49 1069 aaPredicted RBP4.47□□□□□ -1.69
COL8A1-204ENST00000462604 TBC1D32Q96NH3 1257 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 PUS7Q96PZ0 661 aaKnown RBP4.47□□□□□ -1.69
COL8A1-204ENST00000462604 RSPH6AQ9H0K4 717 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 DMRT2Q9Y5R5 561 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 FANCAO15360 1455 aa4.47□□□□□ -1.69
COL8A1-204ENST00000462604 RPGRIP1LQ68CZ1 1315 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 NOS1P29475 1434 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 ADGRB3O60242 1522 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 EFCAB6Q5THR3 1501 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 DEPDC5O75140 1603 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 ZCCHC11Q5TAX3 1644 aaKnown RBP4.46□□□□□ -1.69
COL8A1-204ENST00000462604 ABCA6Q8N139 1617 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 MAP3K4Q9Y6R4 1608 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 KIAA1210Q9ULL0 1709 aa4.46□□□□□ -1.69
COL8A1-204ENST00000462604 MYOM1P52179 1685 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 INO80Q9ULG1 1556 aaPredicted RBP4.46□□□□□ -1.7
COL8A1-204ENST00000462604 ADGRL1O94910 1474 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 ZNF518AQ6AHZ1 1483 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 ABCC11Q96J66 1382 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 CHGAP10645 457 aaKnown RBP4.46□□□□□ -1.7
COL8A1-204ENST00000462604 TNNT2P45379 298 aaPredicted RBP4.46□□□□□ -1.7
COL8A1-204ENST00000462604 MVPQ14764 893 aaKnown RBP4.46□□□□□ -1.7
COL8A1-204ENST00000462604 NEUROD2Q15784 382 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 ZKSCAN2Q63HK3 967 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 TCP11L2Q8N4U5 519 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 PDZRN3Q9UPQ7 1066 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 RRP7AQ9Y3A4 280 aaKnown RBP4.46□□□□□ -1.7
COL8A1-204ENST00000462604 EVC2Q86UK5 1308 aa4.46□□□□□ -1.7
COL8A1-204ENST00000462604 ERCC6L2Q5T890 1561 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 SETBP1Q9Y6X0 1596 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 NLRP1Q9C000 1473 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 ANKRD36BQ8N2N9 1353 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 GOLGA6L3A6NEY3 463 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 DDX11L8A8MPP1 907 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 SEC24BO95487 1268 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 U2AF1L5P0DN76 240 aaPredicted RBP4.45□□□□□ -1.7
COL8A1-204ENST00000462604 U2AF1Q01081 240 aaKnown RBP eCLIP4.45□□□□□ -1.7
COL8A1-204ENST00000462604 HSCBQ8IWL3 235 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 DZIP1LQ8IYY4 767 aaKnown RBP4.45□□□□□ -1.7
COL8A1-204ENST00000462604 SLKQ9H2G2 1235 aaPredicted RBP4.45□□□□□ -1.7
COL8A1-204ENST00000462604 SMC4Q9NTJ3 1288 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 CHMP5Q9NZZ3 219 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.45□□□□□ -1.7
COL8A1-204ENST00000462604 DDX19BQ9UMR2 479 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 TRAK1Q9UPV9 953 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 PCDHB15Q9Y5E8 787 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 CEP152O94986 1710 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 MYO3AQ8NEV4 1616 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 IL16Q14005 1332 aa4.45□□□□□ -1.7
COL8A1-204ENST00000462604 UGGT1Q9NYU2 1555 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 IPO8O15397 1037 aaKnown RBP4.44□□□□□ -1.7
COL8A1-204ENST00000462604 RLBP1P12271 317 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 PTMSP20962 102 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 MCM4P33991 863 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 MTHFSP49914 203 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 HDAC1Q13547 482 aaPredicted RBP4.44□□□□□ -1.7
COL8A1-204ENST00000462604 IFNLR1Q8IU57 520 aaPredicted RBP4.44□□□□□ -1.7
COL8A1-204ENST00000462604 ITPRIPQ8IWB1 547 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 BCL2L13Q9BXK5 485 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 TBC1D2Q9BYX2 928 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 C22orf23Q9BZE7 217 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 SLC12A5Q9H2X9 1139 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 PNNQ9H307 717 aaKnown RBP4.44□□□□□ -1.7
COL8A1-204ENST00000462604 CHMP4BQ9H444 224 aaKnown RBP4.44□□□□□ -1.7
COL8A1-204ENST00000462604 ANTXR1Q9H6X2 564 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 C14orf93Q9H972 538 aaKnown RBP4.44□□□□□ -1.7
COL8A1-204ENST00000462604 POGKQ9P215 609 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 KIF16BQ96L93 1317 aa4.44□□□□□ -1.7
COL8A1-204ENST00000462604 ABCA9Q8IUA7 1624 aa4.43□□□□□ -1.7
COL8A1-204ENST00000462604 MROH1Q8NDA8 1641 aa4.43□□□□□ -1.7
COL8A1-204ENST00000462604 USP32Q8NFA0 1604 aa4.43□□□□□ -1.7
COL8A1-204ENST00000462604 EIF5BO60841 1220 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms