RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 AP1G2O75843 785 aa11.63□□□□□ -0.55
EIF3A-202ENST00000462527 CDCA8Q53HL2 280 aa11.63□□□□□ -0.55
EIF3A-202ENST00000462527 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
EIF3A-202ENST00000462527 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
EIF3A-202ENST00000462527 G3V3G9 751 aa11.61□□□□□ -0.55
EIF3A-202ENST00000462527 OATP04181 439 aa11.61□□□□□ -0.55
EIF3A-202ENST00000462527 VAMP1P23763 118 aa11.61□□□□□ -0.55
EIF3A-202ENST00000462527 ARID4AP29374 1257 aaPredicted RBP11.61□□□□□ -0.55
EIF3A-202ENST00000462527 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
EIF3A-202ENST00000462527 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
EIF3A-202ENST00000462527 BCL11AQ9H165 835 aa11.6□□□□□ -0.55
EIF3A-202ENST00000462527 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
EIF3A-202ENST00000462527 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
EIF3A-202ENST00000462527 WDR62O43379 1518 aa11.59□□□□□ -0.55
EIF3A-202ENST00000462527 URB2Q14146 1524 aaKnown RBP11.59□□□□□ -0.55
EIF3A-202ENST00000462527 POTEMA6NI47 508 aa11.58□□□□□ -0.56
EIF3A-202ENST00000462527 CERS3Q8IU89 383 aa11.58□□□□□ -0.56
EIF3A-202ENST00000462527 ALG2Q9H553 416 aa11.58□□□□□ -0.56
EIF3A-202ENST00000462527 NAALADL2Q58DX5 795 aa11.57□□□□□ -0.56
EIF3A-202ENST00000462527 POTEGQ6S5H5 508 aa11.57□□□□□ -0.56
EIF3A-202ENST00000462527 HIRIP3Q9BW71 556 aaPredicted RBP11.57□□□□□ -0.56
EIF3A-202ENST00000462527 SPTLC1O15269 473 aa11.56□□□□□ -0.56
EIF3A-202ENST00000462527 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
EIF3A-202ENST00000462527 SOX11P35716 441 aa11.56□□□□□ -0.56
EIF3A-202ENST00000462527 MARSP56192 900 aaKnown RBP11.56□□□□□ -0.56
EIF3A-202ENST00000462527 ST18O60284 1047 aa11.55□□□□□ -0.56
EIF3A-202ENST00000462527 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
EIF3A-202ENST00000462527 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
EIF3A-202ENST00000462527 VAC14Q08AM6 782 aa11.54□□□□□ -0.56
EIF3A-202ENST00000462527 ELOAQ14241 798 aaKnown RBP11.54□□□□□ -0.56
EIF3A-202ENST00000462527 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
EIF3A-202ENST00000462527 PSMD1Q99460 953 aa11.54□□□□□ -0.56
EIF3A-202ENST00000462527 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
EIF3A-202ENST00000462527 ZC3H4Q9UPT8 1303 aaKnown RBP11.54□□□□□ -0.56
EIF3A-202ENST00000462527 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
EIF3A-202ENST00000462527 UBE2Q2Q8WVN8 375 aa11.53□□□□□ -0.56
EIF3A-202ENST00000462527 MAFBQ9Y5Q3 323 aaPredicted RBP11.53□□□□□ -0.56
EIF3A-202ENST00000462527 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
EIF3A-202ENST00000462527 CUX2O14529 1486 aa11.52□□□□□ -0.56
EIF3A-202ENST00000462527 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
EIF3A-202ENST00000462527 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
EIF3A-202ENST00000462527 SPIRE2Q8WWL2 714 aa11.52□□□□□ -0.57
EIF3A-202ENST00000462527 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
EIF3A-202ENST00000462527 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
EIF3A-202ENST00000462527 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
EIF3A-202ENST00000462527 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
EIF3A-202ENST00000462527 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
EIF3A-202ENST00000462527 KDM4AO75164 1064 aa11.5□□□□□ -0.57
EIF3A-202ENST00000462527 NUTM2DQ5VT03 806 aaPredicted RBP11.5□□□□□ -0.57
EIF3A-202ENST00000462527 CC2D2BQ6DHV5 1058 aa11.5□□□□□ -0.57
EIF3A-202ENST00000462527 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
EIF3A-202ENST00000462527 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
EIF3A-202ENST00000462527 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
EIF3A-202ENST00000462527 CDHR5Q9HBB8 845 aa11.5□□□□□ -0.57
EIF3A-202ENST00000462527 CUX1P39880 1505 aa11.5□□□□□ -0.57
EIF3A-202ENST00000462527 ANKRD33BA6NCL7 494 aa11.49□□□□□ -0.57
EIF3A-202ENST00000462527 LILRB3O75022 631 aa11.49□□□□□ -0.57
EIF3A-202ENST00000462527 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
EIF3A-202ENST00000462527 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
EIF3A-202ENST00000462527 EVI5O60447 810 aa11.48□□□□□ -0.57
EIF3A-202ENST00000462527 GJA5P36382 358 aa11.48□□□□□ -0.57
EIF3A-202ENST00000462527 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
EIF3A-202ENST00000462527 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
EIF3A-202ENST00000462527 NUTM1Q86Y26 1132 aa11.48□□□□□ -0.57
EIF3A-202ENST00000462527 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
EIF3A-202ENST00000462527 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
EIF3A-202ENST00000462527 SNPHO15079 494 aa11.47□□□□□ -0.57
EIF3A-202ENST00000462527 MAP3K7O43318 606 aa11.47□□□□□ -0.57
EIF3A-202ENST00000462527 TMEM164Q5U3C3 297 aa11.47□□□□□ -0.57
EIF3A-202ENST00000462527 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
EIF3A-202ENST00000462527 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
EIF3A-202ENST00000462527 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.57
EIF3A-202ENST00000462527 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.57
EIF3A-202ENST00000462527 C2orf72A6NCS6 295 aa11.45□□□□□ -0.58
EIF3A-202ENST00000462527 QPCTQ16769 361 aa11.45□□□□□ -0.58
EIF3A-202ENST00000462527 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
EIF3A-202ENST00000462527 GIMAP6Q6P9H5 292 aa11.45□□□□□ -0.58
EIF3A-202ENST00000462527 NOP9Q86U38 636 aaKnown RBP11.45□□□□□ -0.58
EIF3A-202ENST00000462527 EPAS1Q99814 870 aa11.45□□□□□ -0.58
EIF3A-202ENST00000462527 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
EIF3A-202ENST00000462527 ATP9BO43861 1147 aa11.44□□□□□ -0.58
EIF3A-202ENST00000462527 HOXB3P14651 431 aaPredicted RBP11.44□□□□□ -0.58
EIF3A-202ENST00000462527 SSFA2P28290 1259 aa11.44□□□□□ -0.58
EIF3A-202ENST00000462527 DPH6Q7L8W6 267 aa11.44□□□□□ -0.58
EIF3A-202ENST00000462527 PRR7Q8TB68 274 aa11.44□□□□□ -0.58
EIF3A-202ENST00000462527 TARBP1Q13395 1621 aaKnown RBP11.44□□□□□ -0.58
EIF3A-202ENST00000462527 MARCH6O60337 910 aa11.43□□□□□ -0.58
EIF3A-202ENST00000462527 ERCC5P28715 1186 aaPredicted RBP11.43□□□□□ -0.58
EIF3A-202ENST00000462527 ZNF592Q92610 1267 aa11.43□□□□□ -0.58
EIF3A-202ENST00000462527 MARVELD3Q96A59 401 aa11.43□□□□□ -0.58
EIF3A-202ENST00000462527 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
EIF3A-202ENST00000462527 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
EIF3A-202ENST00000462527 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
EIF3A-202ENST00000462527 TBC1D9Q6ZT07 1266 aa11.42□□□□□ -0.58
EIF3A-202ENST00000462527 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
EIF3A-202ENST00000462527 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
EIF3A-202ENST00000462527 NOVA2Q9UNW9 492 aaKnown RBP11.41□□□□□ -0.58
EIF3A-202ENST00000462527 TMA7Q9Y2S6 64 aaKnown RBP11.41□□□□□ -0.58
EIF3A-202ENST00000462527 KIF3CO14782 793 aa11.4□□□□□ -0.58
EIF3A-202ENST00000462527 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms