RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
LINC01140-201ENST00000461990 CCDC66A2RUB6 948 aa11.44□□□□□ -0.58
LINC01140-201ENST00000461990 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
LINC01140-201ENST00000461990 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
LINC01140-201ENST00000461990 CAMSAP2Q08AD1 1489 aa11.43□□□□□ -0.58
LINC01140-201ENST00000461990 SLFN5Q08AF3 891 aa11.43□□□□□ -0.58
LINC01140-201ENST00000461990 PMFBP1Q8TBY8 1022 aa11.43□□□□□ -0.58
LINC01140-201ENST00000461990 GOLGA6L22H0YM25 854 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
LINC01140-201ENST00000461990 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 OGFRQ9NZT2 677 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 NPC1L1Q9UHC9 1359 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 FAM193AP78312 1265 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 PDCL2Q8N4E4 241 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 RBSNQ9H1K0 784 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 ABCC2Q92887 1545 aa11.42□□□□□ -0.58
LINC01140-201ENST00000461990 SAMD9Q5K651 1589 aa11.41□□□□□ -0.58
LINC01140-201ENST00000461990 ZNF771Q7L3S4 317 aaPredicted RBP11.41□□□□□ -0.58
LINC01140-201ENST00000461990 KCNJ4P48050 445 aa11.41□□□□□ -0.58
LINC01140-201ENST00000461990 TIGD1Q96MW7 591 aa11.41□□□□□ -0.58
LINC01140-201ENST00000461990 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
LINC01140-201ENST00000461990 BCCIPQ9P287 314 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC01140-201ENST00000461990 SLFN14P0C7P3 912 aa11.4□□□□□ -0.58
LINC01140-201ENST00000461990 ZSCAN23Q3MJ62 389 aa11.4□□□□□ -0.58
LINC01140-201ENST00000461990 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
LINC01140-201ENST00000461990 PIBF1Q8WXW3 757 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 GEMIN8Q9NWZ8 242 aaKnown RBP11.39□□□□□ -0.59
LINC01140-201ENST00000461990 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
LINC01140-201ENST00000461990 PZPP20742 1482 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 SYNJ2O15056 1496 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 SPTLC3Q9NUV7 552 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 FAM135AQ9P2D6 1515 aa11.39□□□□□ -0.59
LINC01140-201ENST00000461990 UHRF1BP1LA0JNW5 1464 aa11.38□□□□□ -0.59
LINC01140-201ENST00000461990 CTIFO43310 598 aaKnown RBP11.38□□□□□ -0.59
LINC01140-201ENST00000461990 ADAMTS12P58397 1594 aa11.38□□□□□ -0.59
LINC01140-201ENST00000461990 CREBRFQ8IUR6 639 aa11.38□□□□□ -0.59
LINC01140-201ENST00000461990 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
LINC01140-201ENST00000461990 LAMC1P11047 1609 aa11.37□□□□□ -0.59
LINC01140-201ENST00000461990 FKBP5Q13451 457 aaPredicted RBP11.37□□□□□ -0.59
LINC01140-201ENST00000461990 SYCP1Q15431 976 aa11.37□□□□□ -0.59
LINC01140-201ENST00000461990 BAG4O95429 457 aaKnown RBP11.37□□□□□ -0.59
LINC01140-201ENST00000461990 CAPN2P17655 700 aa11.37□□□□□ -0.59
LINC01140-201ENST00000461990 PSEN1P49768 467 aa11.37□□□□□ -0.59
LINC01140-201ENST00000461990 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
LINC01140-201ENST00000461990 DNMT1P26358 1616 aaKnown RBP11.37□□□□□ -0.59
LINC01140-201ENST00000461990 CEP170Q5SW79 1584 aa11.36□□□□□ -0.59
LINC01140-201ENST00000461990 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
LINC01140-201ENST00000461990 EFCC1Q9HA90 598 aa11.36□□□□□ -0.59
LINC01140-201ENST00000461990 CALCOCO1Q9P1Z2 691 aa11.36□□□□□ -0.59
LINC01140-201ENST00000461990 CLGNO14967 610 aa11.36□□□□□ -0.59
LINC01140-201ENST00000461990 JARID2Q92833 1246 aaPredicted RBP11.36□□□□□ -0.59
LINC01140-201ENST00000461990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC01140-201ENST00000461990 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
LINC01140-201ENST00000461990 U2AF2P26368 475 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC01140-201ENST00000461990 AXDND1Q5T1B0 1012 aaPredicted RBP11.35□□□□□ -0.59
LINC01140-201ENST00000461990 LRSAM1Q6UWE0 723 aa11.35□□□□□ -0.59
LINC01140-201ENST00000461990 TSC1Q92574 1164 aa11.35□□□□□ -0.59
LINC01140-201ENST00000461990 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
LINC01140-201ENST00000461990 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
LINC01140-201ENST00000461990 COL17A1Q9UMD9 1497 aaPredicted RBP11.35□□□□□ -0.59
LINC01140-201ENST00000461990 NOLC1Q14978 699 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01140-201ENST00000461990 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
LINC01140-201ENST00000461990 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
LINC01140-201ENST00000461990 TDRD9Q8NDG6 1382 aaKnown RBP11.34□□□□□ -0.59
LINC01140-201ENST00000461990 TERF2Q15554 542 aa11.34□□□□□ -0.59
LINC01140-201ENST00000461990 LMBRD1Q9NUN5 540 aa11.34□□□□□ -0.59
LINC01140-201ENST00000461990 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
LINC01140-201ENST00000461990 BCAR3O75815 825 aa11.33□□□□□ -0.6
LINC01140-201ENST00000461990 MFAP1P55081 439 aaKnown RBP11.33□□□□□ -0.6
LINC01140-201ENST00000461990 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
LINC01140-201ENST00000461990 DDX41Q9UJV9 622 aaKnown RBP11.33□□□□□ -0.6
LINC01140-201ENST00000461990 SOX12O15370 315 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 SSFA2P28290 1259 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 NGEFQ8N5V2 710 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 DIAPH3Q9NSV4 1193 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 DHX37Q8IY37 1157 aaKnown RBP11.32□□□□□ -0.6
LINC01140-201ENST00000461990 CARD11Q9BXL7 1154 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
LINC01140-201ENST00000461990 E9PSI1 815 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 IGSF3O75054 1194 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
LINC01140-201ENST00000461990 CAVIN1Q6NZI2 390 aaKnown RBP11.32□□□□□ -0.6
LINC01140-201ENST00000461990 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
LINC01140-201ENST00000461990 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
LINC01140-201ENST00000461990 CUL7Q14999 1698 aa11.31□□□□□ -0.6
LINC01140-201ENST00000461990 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
LINC01140-201ENST00000461990 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
LINC01140-201ENST00000461990 DAPK1P53355 1430 aa11.31□□□□□ -0.6
LINC01140-201ENST00000461990 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
LINC01140-201ENST00000461990 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
LINC01140-201ENST00000461990 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
LINC01140-201ENST00000461990 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms