RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 KCNQ2O43526 872 aa11.47□□□□□ -0.57
TRAPPC10-205ENST00000461889 TSPY4P0CV99 314 aa11.47□□□□□ -0.57
TRAPPC10-205ENST00000461889 TSPY10P0CW01 314 aa11.47□□□□□ -0.57
TRAPPC10-205ENST00000461889 TRPM2O94759 1503 aa11.46□□□□□ -0.57
TRAPPC10-205ENST00000461889 EHBP1L1Q8N3D4 1523 aa11.46□□□□□ -0.57
TRAPPC10-205ENST00000461889 CAMKK2Q96RR4 588 aa11.46□□□□□ -0.57
TRAPPC10-205ENST00000461889 SLC52A1Q9NWF4 448 aa11.46□□□□□ -0.57
TRAPPC10-205ENST00000461889 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
TRAPPC10-205ENST00000461889 RPRD2Q5VT52 1461 aaKnown RBP11.45□□□□□ -0.58
TRAPPC10-205ENST00000461889 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
TRAPPC10-205ENST00000461889 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
TRAPPC10-205ENST00000461889 EZH2Q15910 746 aaKnown RBP11.45□□□□□ -0.58
TRAPPC10-205ENST00000461889 NOS1P29475 1434 aa11.44□□□□□ -0.58
TRAPPC10-205ENST00000461889 VPS72Q15906 364 aa11.44□□□□□ -0.58
TRAPPC10-205ENST00000461889 ARHGEF5Q12774 1597 aa11.44□□□□□ -0.58
TRAPPC10-205ENST00000461889 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
TRAPPC10-205ENST00000461889 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
TRAPPC10-205ENST00000461889 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
TRAPPC10-205ENST00000461889 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRAPPC10-205ENST00000461889 TNS1Q9HBL0 1735 aaKnown RBP11.41□□□□□ -0.58
TRAPPC10-205ENST00000461889 ADGRL3Q9HAR2 1447 aa11.41□□□□□ -0.58
TRAPPC10-205ENST00000461889 PRELPP51888 382 aa11.4□□□□□ -0.58
TRAPPC10-205ENST00000461889 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.58
TRAPPC10-205ENST00000461889 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
TRAPPC10-205ENST00000461889 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
TRAPPC10-205ENST00000461889 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
TRAPPC10-205ENST00000461889 LMTK2Q8IWU2 1503 aa11.39□□□□□ -0.59
TRAPPC10-205ENST00000461889 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
TRAPPC10-205ENST00000461889 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
TRAPPC10-205ENST00000461889 DUOX2Q9NRD8 1548 aa11.37□□□□□ -0.59
TRAPPC10-205ENST00000461889 HSPA6P17066 643 aa11.37□□□□□ -0.59
TRAPPC10-205ENST00000461889 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
TRAPPC10-205ENST00000461889 RREB1Q92766 1687 aa11.36□□□□□ -0.59
TRAPPC10-205ENST00000461889 CEP162Q5TB80 1403 aa11.36□□□□□ -0.59
TRAPPC10-205ENST00000461889 PTPN23Q9H3S7 1636 aa11.35□□□□□ -0.59
TRAPPC10-205ENST00000461889 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
TRAPPC10-205ENST00000461889 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
TRAPPC10-205ENST00000461889 TMEM131LA2VDJ0 1609 aa11.35□□□□□ -0.59
TRAPPC10-205ENST00000461889 KANK1Q14678 1352 aa11.34□□□□□ -0.59
TRAPPC10-205ENST00000461889 FAM83GA6ND36 823 aa11.34□□□□□ -0.59
TRAPPC10-205ENST00000461889 NALCNQ8IZF0 1738 aa11.34□□□□□ -0.59
TRAPPC10-205ENST00000461889 NPHP3Q7Z494 1330 aa11.34□□□□□ -0.59
TRAPPC10-205ENST00000461889 PXDNQ92626 1479 aa11.33□□□□□ -0.6
TRAPPC10-205ENST00000461889 NWD2Q9ULI1 1742 aa11.33□□□□□ -0.6
TRAPPC10-205ENST00000461889 SYT17Q9BSW7 474 aa11.33□□□□□ -0.6
TRAPPC10-205ENST00000461889 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC10-205ENST00000461889 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
TRAPPC10-205ENST00000461889 CCDC9Q9Y3X0 531 aaKnown RBP11.32□□□□□ -0.6
TRAPPC10-205ENST00000461889 NRKQ7Z2Y5 1582 aa11.32□□□□□ -0.6
TRAPPC10-205ENST00000461889 APBA3O96018 575 aa11.31□□□□□ -0.6
TRAPPC10-205ENST00000461889 ADGRL2O95490 1459 aa11.31□□□□□ -0.6
TRAPPC10-205ENST00000461889 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
TRAPPC10-205ENST00000461889 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 A0A0G2JS52 829 aa11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 MYT1Q01538 1121 aa11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC10-205ENST00000461889 TRIM37O94972 964 aa11.29□□□□□ -0.6
TRAPPC10-205ENST00000461889 PTGER2P43116 358 aa11.29□□□□□ -0.6
TRAPPC10-205ENST00000461889 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
TRAPPC10-205ENST00000461889 MYOM1P52179 1685 aa11.28□□□□□ -0.6
TRAPPC10-205ENST00000461889 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC10-205ENST00000461889 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.6
TRAPPC10-205ENST00000461889 CASZ1Q86V15 1759 aa11.27□□□□□ -0.61
TRAPPC10-205ENST00000461889 NEXMIFQ5QGS0 1516 aa11.26□□□□□ -0.61
TRAPPC10-205ENST00000461889 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
TRAPPC10-205ENST00000461889 TNS4Q8IZW8 715 aa11.26□□□□□ -0.61
TRAPPC10-205ENST00000461889 LRPPRCP42704 1394 aaKnown RBP11.26□□□□□ -0.61
TRAPPC10-205ENST00000461889 DNAJC5GQ8N7S2 189 aa11.25□□□□□ -0.61
TRAPPC10-205ENST00000461889 METP08581 1390 aa11.25□□□□□ -0.61
TRAPPC10-205ENST00000461889 MAP3K5Q99683 1374 aa11.25□□□□□ -0.61
TRAPPC10-205ENST00000461889 KIF15Q9NS87 1388 aa11.25□□□□□ -0.61
TRAPPC10-205ENST00000461889 NRXN3Q9Y4C0 1643 aa11.24□□□□□ -0.61
TRAPPC10-205ENST00000461889 THSD7AQ9UPZ6 1657 aa11.24□□□□□ -0.61
TRAPPC10-205ENST00000461889 SPATA31A3Q5VYP0 1347 aa11.24□□□□□ -0.61
TRAPPC10-205ENST00000461889 FOXO3O43524 673 aa11.23□□□□□ -0.61
TRAPPC10-205ENST00000461889 ESCO1Q5FWF5 840 aa11.22□□□□□ -0.61
TRAPPC10-205ENST00000461889 NRAPQ86VF7 1730 aa11.21□□□□□ -0.61
TRAPPC10-205ENST00000461889 CROCC2H7BZ55 1655 aa11.21□□□□□ -0.61
TRAPPC10-205ENST00000461889 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC10-205ENST00000461889 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 SPATA31A7Q8IWB4 1347 aa11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 ZBTB7AO95365 584 aa11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 APLP1P51693 650 aa11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 GPR162Q16538 588 aa11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
TRAPPC10-205ENST00000461889 ABCC5O15440 1437 aa11.19□□□□□ -0.62
TRAPPC10-205ENST00000461889 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
TRAPPC10-205ENST00000461889 PDGFDQ9GZP0 370 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC10-205ENST00000461889 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC10-205ENST00000461889 RRP7BPQ9NSQ0 103 aa11.18□□□□□ -0.62
TRAPPC10-205ENST00000461889 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC10-205ENST00000461889 PRAG1Q86YV5 1406 aa11.17□□□□□ -0.62
TRAPPC10-205ENST00000461889 JMYQ8N9B5 988 aa11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC10-205ENST00000461889 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms