RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 LTKP29376 864 aa34.32■■■■□ 3.08
CDH23-208ENST00000461841 SRPK2P78362 688 aaKnown RBP34.29■■■■□ 3.08
CDH23-208ENST00000461841 WAPLQ7Z5K2 1190 aa34.29■■■■□ 3.08
CDH23-208ENST00000461841 BCANQ96GW7 911 aa34.29■■■■□ 3.08
CDH23-208ENST00000461841 NSD3Q9BZ95 1437 aa34.28■■■■□ 3.08
CDH23-208ENST00000461841 TXNDC2Q86VQ3 553 aa34.26■■■■□ 3.08
CDH23-208ENST00000461841 PLEKHG1Q9ULL1 1385 aa34.26■■■■□ 3.07
CDH23-208ENST00000461841 PLEKHH1Q9ULM0 1364 aa34.25■■■■□ 3.07
CDH23-208ENST00000461841 ADAMTS13Q76LX8 1427 aa34.25■■■■□ 3.07
CDH23-208ENST00000461841 SLIT1O75093 1534 aa34.24■■■■□ 3.07
CDH23-208ENST00000461841 ANKRD36BQ8N2N9 1353 aa34.24■■■■□ 3.07
CDH23-208ENST00000461841 ARHGAP23Q9P227 1491 aa34.24■■■■□ 3.07
CDH23-208ENST00000461841 NINLQ9Y2I6 1382 aa34.24■■■■□ 3.07
CDH23-208ENST00000461841 CDK19Q9BWU1 502 aa34.23■■■■□ 3.07
CDH23-208ENST00000461841 EID1Q9Y6B2 187 aa34.23■■■■□ 3.07
CDH23-208ENST00000461841 ATAD2Q6PL18 1390 aa34.22■■■■□ 3.07
CDH23-208ENST00000461841 THEMISQ8N1K5 641 aaPredicted RBP34.22■■■■□ 3.07
CDH23-208ENST00000461841 TECPR2O15040 1411 aa34.21■■■■□ 3.07
CDH23-208ENST00000461841 RIMS1Q86UR5 1692 aaKnown RBP34.21■■■■□ 3.07
CDH23-208ENST00000461841 SIRT1Q96EB6 747 aa34.2■■■■□ 3.06
CDH23-208ENST00000461841 KNDC1Q76NI1 1749 aa34.18■■■■□ 3.06
CDH23-208ENST00000461841 USP32Q8NFA0 1604 aa34.18■■■■□ 3.06
CDH23-208ENST00000461841 FAM135BQ49AJ0 1406 aa34.17■■■■□ 3.06
CDH23-208ENST00000461841 MED14O60244 1454 aa34.16■■■■□ 3.06
CDH23-208ENST00000461841 CGNL1Q0VF96 1302 aa34.15■■■■□ 3.06
CDH23-208ENST00000461841 ADAMTSL3P82987 1691 aa34.15■■■■□ 3.06
CDH23-208ENST00000461841 INSRP06213 1382 aa34.14■■■■□ 3.06
CDH23-208ENST00000461841 A0A1W2PP64 1363 aa34.14■■■■□ 3.06
CDH23-208ENST00000461841 CPS1P31327 1500 aa34.13■■■■□ 3.05
CDH23-208ENST00000461841 SENP3-EIF4A1A0A087X0R7 540 aa34.13■■■■□ 3.05
CDH23-208ENST00000461841 SLC26A8Q96RN1 970 aa34.11■■■■□ 3.05
CDH23-208ENST00000461841 SUPT16HQ9Y5B9 1047 aaKnown RBP34.11■■■■□ 3.05
CDH23-208ENST00000461841 MORC1Q86VD1 984 aa34.1■■■■□ 3.05
CDH23-208ENST00000461841 CD163L1Q9NR16 1453 aa34.1■■■■□ 3.05
CDH23-208ENST00000461841 TERF2IPQ9NYB0 399 aa34.09■■■■□ 3.05
CDH23-208ENST00000461841 CEP170BQ9Y4F5 1589 aaPredicted RBP34.09■■■■□ 3.05
CDH23-208ENST00000461841 BLMP54132 1417 aaPredicted RBP34.08■■■■□ 3.05
CDH23-208ENST00000461841 ADAMTS8Q9UP79 889 aa34.08■■■■□ 3.05
CDH23-208ENST00000461841 ROBO2Q9HCK4 1378 aa34.07■■■■□ 3.05
CDH23-208ENST00000461841 WASLO00401 505 aaPredicted RBP34.07■■■■□ 3.04
CDH23-208ENST00000461841 CABP1Q9NZU7 370 aa34.07■■■■□ 3.04
CDH23-208ENST00000461841 TBX22Q9Y458 520 aa34.06■■■■□ 3.04
CDH23-208ENST00000461841 NSD2O96028 1365 aa34.05■■■■□ 3.04
CDH23-208ENST00000461841 PTPRUQ92729 1446 aa34.03■■■■□ 3.04
CDH23-208ENST00000461841 WDR43Q15061 677 aaKnown RBP eCLIP34.03■■■■□ 3.04
CDH23-208ENST00000461841 FKBP8Q14318 412 aa34.01■■■■□ 3.03
CDH23-208ENST00000461841 HDGFL2Q7Z4V5 671 aaPredicted RBP34■■■■□ 3.03
CDH23-208ENST00000461841 SMG6Q86US8 1419 aaKnown RBP34■■■■□ 3.03
CDH23-208ENST00000461841 TNNT2P45379 298 aaPredicted RBP33.99■■■■□ 3.03
CDH23-208ENST00000461841 NEFLP07196 543 aa33.98■■■■□ 3.03
CDH23-208ENST00000461841 POLR3AO14802 1390 aaPredicted RBP33.97■■■■□ 3.03
CDH23-208ENST00000461841 DIP2AQ14689 1571 aa33.96■■■■□ 3.03
CDH23-208ENST00000461841 AMOTL2Q9Y2J4 779 aa33.96■■■■□ 3.03
CDH23-208ENST00000461841 ATP7BP35670 1465 aa33.95■■■■□ 3.03
CDH23-208ENST00000461841 SETD1BQ9UPS6 1966 aaKnown RBP33.94■■■■□ 3.02
CDH23-208ENST00000461841 NUDCQ9Y266 331 aa33.94■■■■□ 3.02
CDH23-208ENST00000461841 ZNF142P52746 1687 aaPredicted RBP33.94■■■■□ 3.02
CDH23-208ENST00000461841 FYB1O15117 783 aa33.94■■■■□ 3.02
CDH23-208ENST00000461841 SALL2Q9Y467 1007 aaPredicted RBP33.94■■■■□ 3.02
CDH23-208ENST00000461841 NUDT16Q96DE0 195 aaKnown RBP33.93■■■■□ 3.02
CDH23-208ENST00000461841 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.93■■■■□ 3.02
CDH23-208ENST00000461841 GGNBP2Q9H3C7 697 aa33.91■■■■□ 3.02
CDH23-208ENST00000461841 PPIP5K1Q6PFW1 1433 aa33.91■■■■□ 3.02
CDH23-208ENST00000461841 CCDC61Q9Y6R9 512 aa33.9■■■■□ 3.02
CDH23-208ENST00000461841 ADGRB2O60241 1585 aa33.9■■■■□ 3.02
CDH23-208ENST00000461841 MTHFSP49914 203 aa33.89■■■■□ 3.02
CDH23-208ENST00000461841 ANKLE2Q86XL3 938 aa33.88■■■■□ 3.01
CDH23-208ENST00000461841 CPSF1Q10570 1443 aaKnown RBP33.87■■■■□ 3.01
CDH23-208ENST00000461841 PTCH1Q13635 1447 aa33.87■■■■□ 3.01
CDH23-208ENST00000461841 NCKAP5LQ9HCH0 1330 aa33.86■■■■□ 3.01
CDH23-208ENST00000461841 PRR36Q9H6K5 1346 aa33.85■■■■□ 3.01
CDH23-208ENST00000461841 PDE3BQ13370 1112 aa33.85■■■■□ 3.01
CDH23-208ENST00000461841 ANKRD26Q9UPS8 1709 aa33.84■■■■□ 3.01
CDH23-208ENST00000461841 PIK3R4Q99570 1358 aa33.82■■■■□ 3
CDH23-208ENST00000461841 XRN1Q8IZH2 1706 aaKnown RBP33.81■■■■□ 3
CDH23-208ENST00000461841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.8■■■■□ 3
CDH23-208ENST00000461841 CDC42BPGQ6DT37 1551 aa33.8■■■■□ 3
CDH23-208ENST00000461841 SHPRHQ149N8 1683 aa33.8■■■■□ 3
CDH23-208ENST00000461841 KIF20BQ96Q89 1820 aa33.79■■■■□ 3
CDH23-208ENST00000461841 CFAP53Q96M91 514 aa33.79■■■■□ 3
CDH23-208ENST00000461841 EDC4Q6P2E9 1401 aaKnown RBP33.78■■■■□ 3
CDH23-208ENST00000461841 CCDC146Q8IYE0 955 aa33.78■■■■□ 3
CDH23-208ENST00000461841 KCNA6P17658 529 aa33.76■■■■□ 3
CDH23-208ENST00000461841 CDCA7LQ96GN5 454 aa33.75■■■□□ 2.99
CDH23-208ENST00000461841 IRX6P78412 446 aaPredicted RBP33.73■■■□□ 2.99
CDH23-208ENST00000461841 ZNF692Q9BU19 519 aaPredicted RBP33.73■■■□□ 2.99
CDH23-208ENST00000461841 NUTM2FA1L443 756 aa33.72■■■□□ 2.99
CDH23-208ENST00000461841 MON2Q7Z3U7 1717 aa33.72■■■□□ 2.99
CDH23-208ENST00000461841 AKAP12Q02952 1782 aa33.71■■■□□ 2.99
CDH23-208ENST00000461841 TOPAZ1Q8N9V7 1692 aa33.71■■■□□ 2.99
CDH23-208ENST00000461841 APAF1O14727 1248 aa33.7■■■□□ 2.99
CDH23-208ENST00000461841 ZNF521Q96K83 1311 aa33.7■■■□□ 2.99
CDH23-208ENST00000461841 PLEKHG3A1L390 1219 aa33.7■■■□□ 2.99
CDH23-208ENST00000461841 ITSN1Q15811 1721 aa33.68■■■□□ 2.98
CDH23-208ENST00000461841 RNF123Q5XPI4 1314 aa33.67■■■□□ 2.98
CDH23-208ENST00000461841 NME9Q86XW9 330 aa33.67■■■□□ 2.98
CDH23-208ENST00000461841 CHD2O14647 1828 aaKnown RBP33.66■■■□□ 2.98
CDH23-208ENST00000461841 ACEP12821 1306 aa33.66■■■□□ 2.98
CDH23-208ENST00000461841 COL3A1P02461 1466 aaPredicted RBP33.63■■■□□ 2.97
CDH23-208ENST00000461841 NKTRP30414 1462 aaKnown RBP33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms