RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 MLLT3P42568 568 aaPredicted RBP9.77□□□□□ -0.85
SPTA1-202ENST00000461624 CFAP43Q8NDM7 1665 aa9.76□□□□□ -0.85
SPTA1-202ENST00000461624 MADDQ8WXG6 1647 aa9.75□□□□□ -0.85
SPTA1-202ENST00000461624 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
SPTA1-202ENST00000461624 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
SPTA1-202ENST00000461624 BCORL1Q5H9F3 1711 aa9.75□□□□□ -0.85
SPTA1-202ENST00000461624 DISP1Q96F81 1524 aa9.75□□□□□ -0.85
SPTA1-202ENST00000461624 IGF1RP08069 1367 aa9.74□□□□□ -0.85
SPTA1-202ENST00000461624 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
SPTA1-202ENST00000461624 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
SPTA1-202ENST00000461624 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
SPTA1-202ENST00000461624 IRX2Q9BZI1 471 aaPredicted RBP9.73□□□□□ -0.85
SPTA1-202ENST00000461624 RNF40O75150 1001 aa9.72□□□□□ -0.85
SPTA1-202ENST00000461624 PTGDRQ13258 359 aa9.72□□□□□ -0.85
SPTA1-202ENST00000461624 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
SPTA1-202ENST00000461624 IL21Q9HBE4 155 aa9.72□□□□□ -0.85
SPTA1-202ENST00000461624 IQGAP2Q13576 1575 aa9.71□□□□□ -0.85
SPTA1-202ENST00000461624 SLC4A3P48751 1232 aa9.71□□□□□ -0.86
SPTA1-202ENST00000461624 EYA1Q99502 592 aa9.71□□□□□ -0.86
SPTA1-202ENST00000461624 CD109Q6YHK3 1445 aa9.71□□□□□ -0.86
SPTA1-202ENST00000461624 SWT1Q5T5J6 900 aaKnown RBP9.7□□□□□ -0.86
SPTA1-202ENST00000461624 MTRQ99707 1265 aa9.7□□□□□ -0.86
SPTA1-202ENST00000461624 APLP1P51693 650 aa9.69□□□□□ -0.86
SPTA1-202ENST00000461624 TTBK1Q5TCY1 1321 aaPredicted RBP9.68□□□□□ -0.86
SPTA1-202ENST00000461624 FRMPD1Q5SYB0 1578 aa9.67□□□□□ -0.86
SPTA1-202ENST00000461624 HSPA2P54652 639 aa9.67□□□□□ -0.86
SPTA1-202ENST00000461624 RBM46Q8TBY0 533 aaKnown RBP9.67□□□□□ -0.86
SPTA1-202ENST00000461624 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
SPTA1-202ENST00000461624 UGGT2Q9NYU1 1516 aa9.66□□□□□ -0.86
SPTA1-202ENST00000461624 DNAJB2P25686 324 aa9.66□□□□□ -0.86
SPTA1-202ENST00000461624 PRR14Q9BWN1 585 aa9.66□□□□□ -0.86
SPTA1-202ENST00000461624 KIAA0556O60303 1618 aa9.65□□□□□ -0.86
SPTA1-202ENST00000461624 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
SPTA1-202ENST00000461624 SEMA3EO15041 775 aa9.65□□□□□ -0.86
SPTA1-202ENST00000461624 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
SPTA1-202ENST00000461624 FCHSD2O94868 740 aa9.64□□□□□ -0.87
SPTA1-202ENST00000461624 ARHGEF40Q8TER5 1519 aa9.62□□□□□ -0.87
SPTA1-202ENST00000461624 TMEM134Q9H6X4 195 aa9.62□□□□□ -0.87
SPTA1-202ENST00000461624 KIF27Q86VH2 1401 aa9.62□□□□□ -0.87
SPTA1-202ENST00000461624 STRCQ7RTU9 1775 aa9.62□□□□□ -0.87
SPTA1-202ENST00000461624 ABCA8O94911 1581 aa9.62□□□□□ -0.87
SPTA1-202ENST00000461624 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
SPTA1-202ENST00000461624 ZNF516Q92618 1163 aa9.61□□□□□ -0.87
SPTA1-202ENST00000461624 CARMIL1Q5VZK9 1371 aa9.61□□□□□ -0.87
SPTA1-202ENST00000461624 ABCA9Q8IUA7 1624 aa9.6□□□□□ -0.87
SPTA1-202ENST00000461624 TESPA1A2RU30 521 aaPredicted RBP9.6□□□□□ -0.87
SPTA1-202ENST00000461624 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
SPTA1-202ENST00000461624 PPP1R18Q6NYC8 613 aa9.6□□□□□ -0.87
SPTA1-202ENST00000461624 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
SPTA1-202ENST00000461624 PHLDB1Q86UU1 1377 aa9.6□□□□□ -0.87
SPTA1-202ENST00000461624 RCCD1A6NED2 376 aa9.59□□□□□ -0.87
SPTA1-202ENST00000461624 HIC1Q14526 733 aa9.59□□□□□ -0.87
SPTA1-202ENST00000461624 TTC37Q6PGP7 1564 aa9.58□□□□□ -0.88
SPTA1-202ENST00000461624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
SPTA1-202ENST00000461624 COPS2P61201 443 aa9.58□□□□□ -0.88
SPTA1-202ENST00000461624 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
SPTA1-202ENST00000461624 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.58□□□□□ -0.88
SPTA1-202ENST00000461624 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
SPTA1-202ENST00000461624 NEO1Q92859 1461 aa9.58□□□□□ -0.88
SPTA1-202ENST00000461624 LTBP4Q8N2S1 1624 aa9.57□□□□□ -0.88
SPTA1-202ENST00000461624 ZPR1O75312 459 aa9.57□□□□□ -0.88
SPTA1-202ENST00000461624 RAPGEF3O95398 923 aa9.57□□□□□ -0.88
SPTA1-202ENST00000461624 OATP04181 439 aa9.57□□□□□ -0.88
SPTA1-202ENST00000461624 GGCXP38435 758 aa9.57□□□□□ -0.88
SPTA1-202ENST00000461624 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
SPTA1-202ENST00000461624 PREX1Q8TCU6 1659 aa9.56□□□□□ -0.88
SPTA1-202ENST00000461624 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
SPTA1-202ENST00000461624 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
SPTA1-202ENST00000461624 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
SPTA1-202ENST00000461624 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
SPTA1-202ENST00000461624 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
SPTA1-202ENST00000461624 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
SPTA1-202ENST00000461624 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
SPTA1-202ENST00000461624 FAM161AQ3B820 660 aa9.54□□□□□ -0.88
SPTA1-202ENST00000461624 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
SPTA1-202ENST00000461624 FER1L4A9Z1Z3 1794 aa9.54□□□□□ -0.88
SPTA1-202ENST00000461624 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
SPTA1-202ENST00000461624 ZMYM4Q5VZL5 1548 aa9.52□□□□□ -0.88
SPTA1-202ENST00000461624 CFHP08603 1231 aa9.52□□□□□ -0.89
SPTA1-202ENST00000461624 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
SPTA1-202ENST00000461624 BLOC1S3Q6QNY0 202 aa9.52□□□□□ -0.89
SPTA1-202ENST00000461624 Q6ZNB5 142 aa9.52□□□□□ -0.89
SPTA1-202ENST00000461624 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.89
SPTA1-202ENST00000461624 FANCAO15360 1455 aa9.52□□□□□ -0.89
SPTA1-202ENST00000461624 PTPRTO14522 1441 aa9.51□□□□□ -0.89
SPTA1-202ENST00000461624 FHOD3Q2V2M9 1422 aa9.51□□□□□ -0.89
SPTA1-202ENST00000461624 GNPATO15228 680 aa9.51□□□□□ -0.89
SPTA1-202ENST00000461624 ARID4BQ4LE39 1312 aaPredicted RBP9.51□□□□□ -0.89
SPTA1-202ENST00000461624 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
SPTA1-202ENST00000461624 GPR37O15354 613 aa9.5□□□□□ -0.89
SPTA1-202ENST00000461624 ATP10BO94823 1461 aa9.5□□□□□ -0.89
SPTA1-202ENST00000461624 SLC10A3P09131 477 aa9.49□□□□□ -0.89
SPTA1-202ENST00000461624 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
SPTA1-202ENST00000461624 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
SPTA1-202ENST00000461624 GFRA3O60609 400 aa9.48□□□□□ -0.89
SPTA1-202ENST00000461624 MED1Q15648 1581 aaPredicted RBP9.48□□□□□ -0.89
SPTA1-202ENST00000461624 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
SPTA1-202ENST00000461624 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
SPTA1-202ENST00000461624 SETD1BQ9UPS6 1966 aaKnown RBP9.47□□□□□ -0.89
SPTA1-202ENST00000461624 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms