RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
BRCA1-206ENST00000461574 LRCH3Q96II8 777 aa8.54□□□□□ -1.04
BRCA1-206ENST00000461574 AKNAQ7Z591 1439 aa8.54□□□□□ -1.04
BRCA1-206ENST00000461574 PREX1Q8TCU6 1659 aa8.53□□□□□ -1.04
BRCA1-206ENST00000461574 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
BRCA1-206ENST00000461574 CERKQ8TCT0 537 aa8.53□□□□□ -1.04
BRCA1-206ENST00000461574 TSR3Q9UJK0 312 aaKnown RBP8.53□□□□□ -1.04
BRCA1-206ENST00000461574 DISP3Q9P2K9 1392 aa8.52□□□□□ -1.05
BRCA1-206ENST00000461574 KCNC4Q03721 635 aa8.52□□□□□ -1.05
BRCA1-206ENST00000461574 E2F4Q16254 413 aa8.52□□□□□ -1.05
BRCA1-206ENST00000461574 ZMYM4Q5VZL5 1548 aa8.52□□□□□ -1.05
BRCA1-206ENST00000461574 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.05
BRCA1-206ENST00000461574 SIGLEC1Q9BZZ2 1709 aa8.51□□□□□ -1.05
BRCA1-206ENST00000461574 NUP153P49790 1475 aaKnown RBP8.51□□□□□ -1.05
BRCA1-206ENST00000461574 SMAPO00193 183 aa8.51□□□□□ -1.05
BRCA1-206ENST00000461574 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-206ENST00000461574 MLECQ14165 292 aa8.51□□□□□ -1.05
BRCA1-206ENST00000461574 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
BRCA1-206ENST00000461574 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-206ENST00000461574 FAM198AQ9UFP1 575 aa8.51□□□□□ -1.05
BRCA1-206ENST00000461574 GRXCR2A6NFK2 248 aa8.5□□□□□ -1.05
BRCA1-206ENST00000461574 FHOD3Q2V2M9 1422 aa8.5□□□□□ -1.05
BRCA1-206ENST00000461574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-206ENST00000461574 SPATA31D1Q6ZQQ2 1576 aa8.49□□□□□ -1.05
BRCA1-206ENST00000461574 YEATS2Q9ULM3 1422 aa8.49□□□□□ -1.05
BRCA1-206ENST00000461574 PLEKHD1A6NEE1 506 aa8.49□□□□□ -1.05
BRCA1-206ENST00000461574 C3orf80F5H4A9 247 aa8.49□□□□□ -1.05
BRCA1-206ENST00000461574 PRSS12P56730 875 aa8.49□□□□□ -1.05
BRCA1-206ENST00000461574 HECW1Q76N89 1606 aa8.49□□□□□ -1.05
BRCA1-206ENST00000461574 PAXIP1Q6ZW49 1069 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-206ENST00000461574 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
BRCA1-206ENST00000461574 ARIH1Q9Y4X5 557 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-206ENST00000461574 MAGI2Q86UL8 1455 aa8.48□□□□□ -1.05
BRCA1-206ENST00000461574 MYO5CQ9NQX4 1742 aa8.48□□□□□ -1.05
BRCA1-206ENST00000461574 SAMD7Q7Z3H4 446 aa8.47□□□□□ -1.05
BRCA1-206ENST00000461574 WDR70Q9NW82 654 aa8.47□□□□□ -1.05
BRCA1-206ENST00000461574 PPP4CP60510 307 aa8.46□□□□□ -1.06
BRCA1-206ENST00000461574 CDHR5Q9HBB8 845 aa8.46□□□□□ -1.06
BRCA1-206ENST00000461574 C9orf84Q5VXU9 1444 aa8.46□□□□□ -1.06
BRCA1-206ENST00000461574 STRCQ7RTU9 1775 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 ARHGEF12Q9NZN5 1544 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 SOCS7O14512 581 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 OSBPP22059 807 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 TATDN2Q93075 761 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 UHRF1BP1Q6BDS2 1440 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 SCAPERQ9BY12 1400 aa8.45□□□□□ -1.06
BRCA1-206ENST00000461574 ILDR2Q71H61 639 aa8.44□□□□□ -1.06
BRCA1-206ENST00000461574 ATP10AO60312 1499 aa8.44□□□□□ -1.06
BRCA1-206ENST00000461574 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
BRCA1-206ENST00000461574 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
BRCA1-206ENST00000461574 TJAP1Q5JTD0 557 aa8.43□□□□□ -1.06
BRCA1-206ENST00000461574 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
BRCA1-206ENST00000461574 KIF14Q15058 1648 aa8.43□□□□□ -1.06
BRCA1-206ENST00000461574 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-206ENST00000461574 AMER1Q5JTC6 1135 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-206ENST00000461574 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-206ENST00000461574 C3P01024 1663 aa8.42□□□□□ -1.06
BRCA1-206ENST00000461574 SETD1BQ9UPS6 1966 aaKnown RBP8.42□□□□□ -1.06
BRCA1-206ENST00000461574 ARHGAP5Q13017 1502 aa8.41□□□□□ -1.06
BRCA1-206ENST00000461574 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
BRCA1-206ENST00000461574 PLCH2O75038 1416 aa8.41□□□□□ -1.06
BRCA1-206ENST00000461574 NUDT18Q6ZVK8 323 aa8.41□□□□□ -1.06
BRCA1-206ENST00000461574 ESF1Q9H501 851 aaKnown RBP8.41□□□□□ -1.06
BRCA1-206ENST00000461574 EEA1Q15075 1411 aa8.39□□□□□ -1.07
BRCA1-206ENST00000461574 EFCAB2Q5VUJ9 269 aa8.39□□□□□ -1.07
BRCA1-206ENST00000461574 Q6ZNB5 142 aa8.39□□□□□ -1.07
BRCA1-206ENST00000461574 MTRQ99707 1265 aa8.39□□□□□ -1.07
BRCA1-206ENST00000461574 SUPT6HQ7KZ85 1726 aaKnown RBP8.39□□□□□ -1.07
BRCA1-206ENST00000461574 DIP2CQ9Y2E4 1556 aa8.39□□□□□ -1.07
BRCA1-206ENST00000461574 RNF40O75150 1001 aa8.38□□□□□ -1.07
BRCA1-206ENST00000461574 NPDC1Q9NQX5 325 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-206ENST00000461574 RBM27Q9P2N5 1060 aaKnown RBP8.38□□□□□ -1.07
BRCA1-206ENST00000461574 ABCA6Q8N139 1617 aa8.38□□□□□ -1.07
BRCA1-206ENST00000461574 KDM5CP41229 1560 aa8.38□□□□□ -1.07
BRCA1-206ENST00000461574 PTPRTO14522 1441 aa8.37□□□□□ -1.07
BRCA1-206ENST00000461574 CLIP1P30622 1438 aa8.37□□□□□ -1.07
BRCA1-206ENST00000461574 APLP1P51693 650 aa8.37□□□□□ -1.07
BRCA1-206ENST00000461574 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
BRCA1-206ENST00000461574 ZNF516Q92618 1163 aa8.37□□□□□ -1.07
BRCA1-206ENST00000461574 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
BRCA1-206ENST00000461574 CDK11AQ9UQ88 783 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-206ENST00000461574 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
BRCA1-206ENST00000461574 PADI6Q6TGC4 694 aa8.36□□□□□ -1.07
BRCA1-206ENST00000461574 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
BRCA1-206ENST00000461574 IQSEC2Q5JU85 1478 aa8.36□□□□□ -1.07
BRCA1-206ENST00000461574 FMN1Q68DA7 1419 aa8.36□□□□□ -1.07
BRCA1-206ENST00000461574 ITSN2Q9NZM3 1697 aa8.35□□□□□ -1.07
BRCA1-206ENST00000461574 HDGFP51858 240 aaKnown RBP8.35□□□□□ -1.07
BRCA1-206ENST00000461574 PREX2Q70Z35 1606 aa8.35□□□□□ -1.07
BRCA1-206ENST00000461574 LTBP4Q8N2S1 1624 aa8.35□□□□□ -1.07
BRCA1-206ENST00000461574 CAMSAP1Q5T5Y3 1602 aa8.34□□□□□ -1.07
BRCA1-206ENST00000461574 SWT1Q5T5J6 900 aaKnown RBP8.34□□□□□ -1.07
BRCA1-206ENST00000461574 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
BRCA1-206ENST00000461574 AFAP1Q8N556 730 aa8.34□□□□□ -1.07
BRCA1-206ENST00000461574 PRKD2Q9BZL6 878 aa8.34□□□□□ -1.07
BRCA1-206ENST00000461574 TRAPPC8Q9Y2L5 1435 aa8.34□□□□□ -1.07
BRCA1-206ENST00000461574 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
BRCA1-206ENST00000461574 AGLP35573 1532 aa8.34□□□□□ -1.08
BRCA1-206ENST00000461574 MROH2AA6NES4 1674 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms