RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 USP46P62068 366 aa8.8□□□□□ -1
SPTLC1-203ENST00000461132 CCDC102AQ96A19 550 aa8.79□□□□□ -1
SPTLC1-203ENST00000461132 GPCPD1Q9NPB8 672 aa8.79□□□□□ -1
SPTLC1-203ENST00000461132 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
SPTLC1-203ENST00000461132 TTC24A2A3L6 582 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1-203ENST00000461132 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
SPTLC1-203ENST00000461132 CCDC24Q8N4L8 307 aa8.76□□□□□ -1.01
SPTLC1-203ENST00000461132 PKD2L1Q9P0L9 805 aa8.76□□□□□ -1.01
SPTLC1-203ENST00000461132 HOXA2O43364 376 aa8.73□□□□□ -1.01
SPTLC1-203ENST00000461132 MMP16P51512 607 aa8.72□□□□□ -1.01
SPTLC1-203ENST00000461132 TRIM32Q13049 653 aa8.72□□□□□ -1.01
SPTLC1-203ENST00000461132 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.72□□□□□ -1.01
SPTLC1-203ENST00000461132 FAM217BQ9NTX9 383 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1-203ENST00000461132 AXIN1O15169 862 aa8.71□□□□□ -1.02
SPTLC1-203ENST00000461132 ST8SIA5O15466 376 aa8.71□□□□□ -1.02
SPTLC1-203ENST00000461132 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
SPTLC1-203ENST00000461132 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
SPTLC1-203ENST00000461132 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
SPTLC1-203ENST00000461132 TOR4AQ9NXH8 423 aa8.71□□□□□ -1.02
SPTLC1-203ENST00000461132 DXOO77932 396 aaKnown RBP8.7□□□□□ -1.02
SPTLC1-203ENST00000461132 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
SPTLC1-203ENST00000461132 HLA-CQ95604 372 aa8.7□□□□□ -1.02
SPTLC1-203ENST00000461132 ZNF775Q96BV0 537 aaPredicted RBP8.7□□□□□ -1.02
SPTLC1-203ENST00000461132 WNT7AO00755 349 aa8.69□□□□□ -1.02
SPTLC1-203ENST00000461132 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
SPTLC1-203ENST00000461132 C6orf229H3BNL8 230 aa8.68□□□□□ -1.02
SPTLC1-203ENST00000461132 GUCA2AQ02747 115 aa8.68□□□□□ -1.02
SPTLC1-203ENST00000461132 SLC24A1O60721 1099 aa8.67□□□□□ -1.02
SPTLC1-203ENST00000461132 JUNDP17535 347 aa8.67□□□□□ -1.02
SPTLC1-203ENST00000461132 RETREG3Q86VR2 466 aa8.67□□□□□ -1.02
SPTLC1-203ENST00000461132 CRIPAKQ8N1N5 446 aa8.67□□□□□ -1.02
SPTLC1-203ENST00000461132 AVPP01185 164 aa8.66□□□□□ -1.02
SPTLC1-203ENST00000461132 FDX1P10109 184 aa8.66□□□□□ -1.02
SPTLC1-203ENST00000461132 SSTR3P32745 418 aaPredicted RBP8.66□□□□□ -1.02
SPTLC1-203ENST00000461132 MRGPRX2Q96LB1 330 aa8.66□□□□□ -1.02
SPTLC1-203ENST00000461132 NUDT12Q9BQG2 462 aa8.65□□□□□ -1.02
SPTLC1-203ENST00000461132 POTECB2RU33 542 aa8.64□□□□□ -1.03
SPTLC1-203ENST00000461132 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
SPTLC1-203ENST00000461132 WNT7BP56706 349 aa8.64□□□□□ -1.03
SPTLC1-203ENST00000461132 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
SPTLC1-203ENST00000461132 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
SPTLC1-203ENST00000461132 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
SPTLC1-203ENST00000461132 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
SPTLC1-203ENST00000461132 ZMYND10O75800 440 aa8.61□□□□□ -1.03
SPTLC1-203ENST00000461132 MS4A1P11836 297 aa8.61□□□□□ -1.03
SPTLC1-203ENST00000461132 DIXDC1Q155Q3 683 aa8.61□□□□□ -1.03
SPTLC1-203ENST00000461132 J3QL48 77 aa8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 SMPD1P17405 629 aa8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 ZC3H15Q8WU90 426 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
SPTLC1-203ENST00000461132 ALDH1A1P00352 501 aa8.59□□□□□ -1.03
SPTLC1-203ENST00000461132 CCNYL3P0C7X3 344 aa8.59□□□□□ -1.03
SPTLC1-203ENST00000461132 MTMR2Q13614 643 aa8.59□□□□□ -1.03
SPTLC1-203ENST00000461132 DACH1Q9UI36 760 aa8.59□□□□□ -1.03
SPTLC1-203ENST00000461132 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
SPTLC1-203ENST00000461132 AMHR2Q16671 573 aa8.58□□□□□ -1.04
SPTLC1-203ENST00000461132 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
SPTLC1-203ENST00000461132 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
SPTLC1-203ENST00000461132 NDUFV2P19404 249 aa8.57□□□□□ -1.04
SPTLC1-203ENST00000461132 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
SPTLC1-203ENST00000461132 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
SPTLC1-203ENST00000461132 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
SPTLC1-203ENST00000461132 SKOR1P84550 965 aa8.56□□□□□ -1.04
SPTLC1-203ENST00000461132 PTPRNQ16849 979 aa8.56□□□□□ -1.04
SPTLC1-203ENST00000461132 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
SPTLC1-203ENST00000461132 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
SPTLC1-203ENST00000461132 HPS1Q92902 700 aa8.55□□□□□ -1.04
SPTLC1-203ENST00000461132 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
SPTLC1-203ENST00000461132 KIFC2Q96AC6 838 aa8.54□□□□□ -1.04
SPTLC1-203ENST00000461132 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
SPTLC1-203ENST00000461132 CTHP32929 405 aa8.53□□□□□ -1.04
SPTLC1-203ENST00000461132 PTCRAQ6ISU1 281 aaPredicted RBP8.53□□□□□ -1.04
SPTLC1-203ENST00000461132 AK7Q96M32 723 aa8.53□□□□□ -1.04
SPTLC1-203ENST00000461132 TBC1D2Q9BYX2 928 aa8.53□□□□□ -1.04
SPTLC1-203ENST00000461132 EVA1BQ9NVM1 165 aa8.53□□□□□ -1.04
SPTLC1-203ENST00000461132 WFS1O76024 890 aa8.52□□□□□ -1.05
SPTLC1-203ENST00000461132 KCNH2Q12809 1159 aa8.52□□□□□ -1.05
SPTLC1-203ENST00000461132 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
SPTLC1-203ENST00000461132 SH3BP2P78314 561 aa8.51□□□□□ -1.05
SPTLC1-203ENST00000461132 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
SPTLC1-203ENST00000461132 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
SPTLC1-203ENST00000461132 ZBTB3Q9H5J0 574 aa8.51□□□□□ -1.05
SPTLC1-203ENST00000461132 GJA5P36382 358 aa8.5□□□□□ -1.05
SPTLC1-203ENST00000461132 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
SPTLC1-203ENST00000461132 TRIM47Q96LD4 638 aa8.5□□□□□ -1.05
SPTLC1-203ENST00000461132 TRIM66O15016 1216 aa8.49□□□□□ -1.05
SPTLC1-203ENST00000461132 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
SPTLC1-203ENST00000461132 BAP1Q92560 729 aa8.49□□□□□ -1.05
SPTLC1-203ENST00000461132 TSC1Q92574 1164 aa8.49□□□□□ -1.05
SPTLC1-203ENST00000461132 CAPN5O15484 640 aaPredicted RBP8.48□□□□□ -1.05
SPTLC1-203ENST00000461132 VARSP26640 1264 aaKnown RBP8.48□□□□□ -1.05
SPTLC1-203ENST00000461132 ZNF511Q8NB15 262 aa8.48□□□□□ -1.05
SPTLC1-203ENST00000461132 SIAH2O43255 324 aa8.47□□□□□ -1.05
SPTLC1-203ENST00000461132 AGERQ15109 404 aa8.47□□□□□ -1.05
SPTLC1-203ENST00000461132 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
SPTLC1-203ENST00000461132 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
SPTLC1-203ENST00000461132 NUTM2BA6NNL0 878 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms