RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
ATPAF1-203ENST00000460928 PRDM9Q9NQV7 894 aa9.08□□□□□ -0.96
ATPAF1-203ENST00000460928 RB1CC1Q8TDY2 1594 aa9.07□□□□□ -0.96
ATPAF1-203ENST00000460928 TNFRSF10AO00220 468 aa9.07□□□□□ -0.96
ATPAF1-203ENST00000460928 CLCN1P35523 988 aa9.07□□□□□ -0.96
ATPAF1-203ENST00000460928 GPCPD1Q9NPB8 672 aa9.07□□□□□ -0.96
ATPAF1-203ENST00000460928 PKD2L1Q9P0L9 805 aa9.07□□□□□ -0.96
ATPAF1-203ENST00000460928 NACADO15069 1562 aa9.07□□□□□ -0.96
ATPAF1-203ENST00000460928 CD2BP2O95400 341 aaKnown RBP9.06□□□□□ -0.96
ATPAF1-203ENST00000460928 MMP16P51512 607 aa9.06□□□□□ -0.96
ATPAF1-203ENST00000460928 MYT1Q01538 1121 aa9.06□□□□□ -0.96
ATPAF1-203ENST00000460928 FAM217BQ9NTX9 383 aaPredicted RBP9.05□□□□□ -0.96
ATPAF1-203ENST00000460928 HOXA2O43364 376 aa9.04□□□□□ -0.96
ATPAF1-203ENST00000460928 USB1Q9BQ65 265 aaKnown RBP9.04□□□□□ -0.96
ATPAF1-203ENST00000460928 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
ATPAF1-203ENST00000460928 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
ATPAF1-203ENST00000460928 ZBTB24O43167 697 aaPredicted RBP9.01□□□□□ -0.97
ATPAF1-203ENST00000460928 FOXC1Q12948 553 aa9.01□□□□□ -0.97
ATPAF1-203ENST00000460928 BARGINQ6ZT62 677 aa9.01□□□□□ -0.97
ATPAF1-203ENST00000460928 ZNF775Q96BV0 537 aaPredicted RBP9.01□□□□□ -0.97
ATPAF1-203ENST00000460928 TOR4AQ9NXH8 423 aa9.01□□□□□ -0.97
ATPAF1-203ENST00000460928 HLA-CQ95604 372 aa9□□□□□ -0.97
ATPAF1-203ENST00000460928 DCAF1Q9Y4B6 1507 aa9□□□□□ -0.97
ATPAF1-203ENST00000460928 ZMYND10O75800 440 aa8.99□□□□□ -0.97
ATPAF1-203ENST00000460928 CRIPAKQ8N1N5 446 aa8.99□□□□□ -0.97
ATPAF1-203ENST00000460928 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
ATPAF1-203ENST00000460928 AVPP01185 164 aa8.98□□□□□ -0.97
ATPAF1-203ENST00000460928 TRIM32Q13049 653 aa8.98□□□□□ -0.97
ATPAF1-203ENST00000460928 REPIN1Q9BWE0 567 aaKnown RBP8.98□□□□□ -0.97
ATPAF1-203ENST00000460928 MYO15BQ96JP2 1530 aa8.97□□□□□ -0.97
ATPAF1-203ENST00000460928 WNT7AO00755 349 aa8.97□□□□□ -0.97
ATPAF1-203ENST00000460928 AMHR2Q16671 573 aa8.97□□□□□ -0.97
ATPAF1-203ENST00000460928 NUTM1Q86Y26 1132 aa8.97□□□□□ -0.97
ATPAF1-203ENST00000460928 SCRIBQ14160 1630 aa8.96□□□□□ -0.98
ATPAF1-203ENST00000460928 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
ATPAF1-203ENST00000460928 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
ATPAF1-203ENST00000460928 UNC13AQ9UPW8 1703 aa8.96□□□□□ -0.98
ATPAF1-203ENST00000460928 SSTR3P32745 418 aaPredicted RBP8.95□□□□□ -0.98
ATPAF1-203ENST00000460928 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
ATPAF1-203ENST00000460928 RETREG3Q86VR2 466 aa8.95□□□□□ -0.98
ATPAF1-203ENST00000460928 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
ATPAF1-203ENST00000460928 CECR2Q9BXF3 1484 aa8.95□□□□□ -0.98
ATPAF1-203ENST00000460928 JUNDP17535 347 aa8.94□□□□□ -0.98
ATPAF1-203ENST00000460928 ST8SIA5O15466 376 aa8.93□□□□□ -0.98
ATPAF1-203ENST00000460928 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
ATPAF1-203ENST00000460928 CTC1Q2NKJ3 1217 aa8.93□□□□□ -0.98
ATPAF1-203ENST00000460928 POTECB2RU33 542 aa8.92□□□□□ -0.98
ATPAF1-203ENST00000460928 FDX1P10109 184 aa8.92□□□□□ -0.98
ATPAF1-203ENST00000460928 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
ATPAF1-203ENST00000460928 SHROOM4Q9ULL8 1493 aa8.91□□□□□ -0.98
ATPAF1-203ENST00000460928 WNT7BP56706 349 aa8.91□□□□□ -0.98
ATPAF1-203ENST00000460928 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
ATPAF1-203ENST00000460928 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
ATPAF1-203ENST00000460928 SYMPKQ92797 1274 aaKnown RBP8.91□□□□□ -0.98
ATPAF1-203ENST00000460928 PCDHGC3Q9UN70 934 aa8.91□□□□□ -0.98
ATPAF1-203ENST00000460928 TTC24A2A3L6 582 aaPredicted RBP8.9□□□□□ -0.98
ATPAF1-203ENST00000460928 GIGYF2Q6Y7W6 1299 aaKnown RBP8.9□□□□□ -0.98
ATPAF1-203ENST00000460928 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
ATPAF1-203ENST00000460928 AXIN1O15169 862 aa8.89□□□□□ -0.99
ATPAF1-203ENST00000460928 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
ATPAF1-203ENST00000460928 BICRAQ9NZM4 1560 aa8.88□□□□□ -0.99
ATPAF1-203ENST00000460928 SMPD1P17405 629 aa8.88□□□□□ -0.99
ATPAF1-203ENST00000460928 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
ATPAF1-203ENST00000460928 CC2D2AQ9P2K1 1620 aa8.87□□□□□ -0.99
ATPAF1-203ENST00000460928 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
ATPAF1-203ENST00000460928 C6orf229H3BNL8 230 aa8.87□□□□□ -0.99
ATPAF1-203ENST00000460928 GJA5P36382 358 aa8.87□□□□□ -0.99
ATPAF1-203ENST00000460928 SKOR1P84550 965 aa8.87□□□□□ -0.99
ATPAF1-203ENST00000460928 RC3H1Q5TC82 1133 aaKnown RBP8.86□□□□□ -0.99
ATPAF1-203ENST00000460928 SPDYE5A6NIY4 337 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 MS4A1P11836 297 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 NDUFV2P19404 249 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 DIXDC1Q155Q3 683 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 PTPRNQ16849 979 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 DESI1Q6ICB0 168 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 PARP9Q8IXQ6 854 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 DACH1Q9UI36 760 aa8.85□□□□□ -0.99
ATPAF1-203ENST00000460928 TRIM66O15016 1216 aa8.84□□□□□ -0.99
ATPAF1-203ENST00000460928 CCNYL3P0C7X3 344 aa8.84□□□□□ -0.99
ATPAF1-203ENST00000460928 J3QL48 77 aa8.83□□□□□ -1
ATPAF1-203ENST00000460928 MTMR2Q13614 643 aa8.83□□□□□ -1
ATPAF1-203ENST00000460928 PTCRAQ6ISU1 281 aaPredicted RBP8.83□□□□□ -1
ATPAF1-203ENST00000460928 AK7Q96M32 723 aa8.83□□□□□ -1
ATPAF1-203ENST00000460928 TREML4Q6UXN2 200 aa8.82□□□□□ -1
ATPAF1-203ENST00000460928 EVA1BQ9NVM1 165 aa8.82□□□□□ -1
ATPAF1-203ENST00000460928 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
ATPAF1-203ENST00000460928 PRR7Q8TB68 274 aa8.81□□□□□ -1
ATPAF1-203ENST00000460928 TBC1D2Q9BYX2 928 aa8.81□□□□□ -1
ATPAF1-203ENST00000460928 GMPR2Q9P2T1 348 aaKnown RBP8.81□□□□□ -1
ATPAF1-203ENST00000460928 SIAH2O43255 324 aa8.8□□□□□ -1
ATPAF1-203ENST00000460928 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
ATPAF1-203ENST00000460928 SPTLC1O15269 473 aa8.79□□□□□ -1
ATPAF1-203ENST00000460928 HPS1Q92902 700 aa8.79□□□□□ -1
ATPAF1-203ENST00000460928 CUX2O14529 1486 aa8.78□□□□□ -1
ATPAF1-203ENST00000460928 SH3BP2P78314 561 aa8.78□□□□□ -1
ATPAF1-203ENST00000460928 KCNH2Q12809 1159 aa8.78□□□□□ -1
ATPAF1-203ENST00000460928 EHBP1Q8NDI1 1231 aa8.78□□□□□ -1
ATPAF1-203ENST00000460928 UNC93B1Q9H1C4 597 aa8.78□□□□□ -1
ATPAF1-203ENST00000460928 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms