RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 LAPTM4AQ15012 233 aa11.07□□□□□ -0.64
FAM228B-201ENST00000460686 Q6ZNB5 142 aa11.07□□□□□ -0.64
FAM228B-201ENST00000460686 FDX1P10109 184 aa11.06□□□□□ -0.64
FAM228B-201ENST00000460686 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
FAM228B-201ENST00000460686 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
FAM228B-201ENST00000460686 MS4A1P11836 297 aa11.05□□□□□ -0.64
FAM228B-201ENST00000460686 SYMPKQ92797 1274 aaKnown RBP11.05□□□□□ -0.64
FAM228B-201ENST00000460686 NDUFV2P19404 249 aa11.04□□□□□ -0.64
FAM228B-201ENST00000460686 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
FAM228B-201ENST00000460686 ZNF598Q86UK7 904 aaKnown RBP11.04□□□□□ -0.64
FAM228B-201ENST00000460686 MOXD2PA6NHM9 499 aa11.03□□□□□ -0.64
FAM228B-201ENST00000460686 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
FAM228B-201ENST00000460686 NRG2O14511 850 aaPredicted RBP11.02□□□□□ -0.65
FAM228B-201ENST00000460686 TBC1D2Q9BYX2 928 aa11.02□□□□□ -0.65
FAM228B-201ENST00000460686 ZBTB24O43167 697 aaPredicted RBP11.01□□□□□ -0.65
FAM228B-201ENST00000460686 MMP16P51512 607 aa11.01□□□□□ -0.65
FAM228B-201ENST00000460686 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
FAM228B-201ENST00000460686 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
FAM228B-201ENST00000460686 RETREG3Q86VR2 466 aa11□□□□□ -0.65
FAM228B-201ENST00000460686 DXOO77932 396 aaKnown RBP10.99□□□□□ -0.65
FAM228B-201ENST00000460686 RPIAP49247 311 aa10.99□□□□□ -0.65
FAM228B-201ENST00000460686 CCDC24Q8N4L8 307 aa10.99□□□□□ -0.65
FAM228B-201ENST00000460686 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
FAM228B-201ENST00000460686 JUNDP17535 347 aa10.97□□□□□ -0.65
FAM228B-201ENST00000460686 TNFRSF10AO00220 468 aa10.96□□□□□ -0.65
FAM228B-201ENST00000460686 FOXC1Q12948 553 aa10.96□□□□□ -0.65
FAM228B-201ENST00000460686 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.65
FAM228B-201ENST00000460686 RSBN1LQ6PCB5 846 aaPredicted RBP10.95□□□□□ -0.66
FAM228B-201ENST00000460686 MTMR2Q13614 643 aa10.94□□□□□ -0.66
FAM228B-201ENST00000460686 PRR20EP86478 221 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 PRR20CP86479 221 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 PRR20DP86480 221 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 PRR20BP86481 221 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 PRR20AP86496 221 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 RIC3Q7Z5B4 369 aa10.93□□□□□ -0.66
FAM228B-201ENST00000460686 SPTLC1O15269 473 aa10.92□□□□□ -0.66
FAM228B-201ENST00000460686 GDF9O60383 454 aa10.92□□□□□ -0.66
FAM228B-201ENST00000460686 GJA5P36382 358 aa10.92□□□□□ -0.66
FAM228B-201ENST00000460686 PRR7Q8TB68 274 aa10.92□□□□□ -0.66
FAM228B-201ENST00000460686 TRIM32Q13049 653 aa10.91□□□□□ -0.66
FAM228B-201ENST00000460686 NUDT12Q9BQG2 462 aa10.91□□□□□ -0.66
FAM228B-201ENST00000460686 PCDHB15Q9Y5E8 787 aa10.91□□□□□ -0.66
FAM228B-201ENST00000460686 SPDYE5A6NIY4 337 aa10.9□□□□□ -0.66
FAM228B-201ENST00000460686 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.66
FAM228B-201ENST00000460686 PKDCCQ504Y2 493 aa10.89□□□□□ -0.67
FAM228B-201ENST00000460686 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
FAM228B-201ENST00000460686 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
FAM228B-201ENST00000460686 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
FAM228B-201ENST00000460686 PKD2L1Q9P0L9 805 aa10.89□□□□□ -0.67
FAM228B-201ENST00000460686 FAM187AA6NFU0 413 aa10.88□□□□□ -0.67
FAM228B-201ENST00000460686 CABLES1Q8TDN4 633 aa10.87□□□□□ -0.67
FAM228B-201ENST00000460686 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
FAM228B-201ENST00000460686 CCNYL3P0C7X3 344 aa10.86□□□□□ -0.67
FAM228B-201ENST00000460686 HRCP23327 699 aa10.86□□□□□ -0.67
FAM228B-201ENST00000460686 RSPH6AQ9H0K4 717 aa10.86□□□□□ -0.67
FAM228B-201ENST00000460686 LIMD1Q9UGP4 676 aa10.86□□□□□ -0.67
FAM228B-201ENST00000460686 NUTM2BA6NNL0 878 aaPredicted RBP10.85□□□□□ -0.67
FAM228B-201ENST00000460686 NUTM2EB1AL46 878 aaPredicted RBP10.85□□□□□ -0.67
FAM228B-201ENST00000460686 PTPRNQ16849 979 aa10.85□□□□□ -0.67
FAM228B-201ENST00000460686 NUTM2DQ5VT03 806 aaPredicted RBP10.85□□□□□ -0.67
FAM228B-201ENST00000460686 PRPF38BQ5VTL8 546 aaKnown RBP10.85□□□□□ -0.67
FAM228B-201ENST00000460686 NUTM2AQ8IVF1 878 aaPredicted RBP10.85□□□□□ -0.67
FAM228B-201ENST00000460686 CYP4X1Q8N118 509 aa10.85□□□□□ -0.67
FAM228B-201ENST00000460686 LCE2BO14633 110 aa10.84□□□□□ -0.67
FAM228B-201ENST00000460686 DGAT1O75907 488 aa10.84□□□□□ -0.67
FAM228B-201ENST00000460686 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
FAM228B-201ENST00000460686 TSC1Q92574 1164 aa10.84□□□□□ -0.67
FAM228B-201ENST00000460686 POLR3EQ9NVU0 708 aa10.84□□□□□ -0.67
FAM228B-201ENST00000460686 CFAP99D6REC4 459 aa10.83□□□□□ -0.68
FAM228B-201ENST00000460686 CLK2P49760 499 aaKnown RBP10.83□□□□□ -0.68
FAM228B-201ENST00000460686 DESI1Q6ICB0 168 aa10.83□□□□□ -0.68
FAM228B-201ENST00000460686 ATP1B4Q9UN42 357 aaPredicted RBP10.83□□□□□ -0.68
FAM228B-201ENST00000460686 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
FAM228B-201ENST00000460686 WNT7AO00755 349 aa10.82□□□□□ -0.68
FAM228B-201ENST00000460686 QPCTQ16769 361 aa10.82□□□□□ -0.68
FAM228B-201ENST00000460686 NISCHQ9Y2I1 1504 aa10.82□□□□□ -0.68
FAM228B-201ENST00000460686 CTHP32929 405 aa10.8□□□□□ -0.68
FAM228B-201ENST00000460686 WNT7BP56706 349 aa10.8□□□□□ -0.68
FAM228B-201ENST00000460686 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
FAM228B-201ENST00000460686 MRGPRX2Q96LB1 330 aa10.8□□□□□ -0.68
FAM228B-201ENST00000460686 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
FAM228B-201ENST00000460686 EVA1BQ9NVM1 165 aa10.8□□□□□ -0.68
FAM228B-201ENST00000460686 SKOR1P84550 965 aa10.79□□□□□ -0.68
FAM228B-201ENST00000460686 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
FAM228B-201ENST00000460686 TUSC1Q2TAM9 212 aa10.79□□□□□ -0.68
FAM228B-201ENST00000460686 RC3H1Q5TC82 1133 aaKnown RBP10.79□□□□□ -0.68
FAM228B-201ENST00000460686 UNC93B1Q9H1C4 597 aa10.79□□□□□ -0.68
FAM228B-201ENST00000460686 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
FAM228B-201ENST00000460686 LILRB3O75022 631 aa10.78□□□□□ -0.68
FAM228B-201ENST00000460686 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
FAM228B-201ENST00000460686 MYT1Q01538 1121 aa10.77□□□□□ -0.69
FAM228B-201ENST00000460686 SNIP1Q8TAD8 396 aaKnown RBP10.77□□□□□ -0.69
FAM228B-201ENST00000460686 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
FAM228B-201ENST00000460686 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
FAM228B-201ENST00000460686 TPRNQ4KMQ1 711 aa10.76□□□□□ -0.69
FAM228B-201ENST00000460686 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
FAM228B-201ENST00000460686 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
FAM228B-201ENST00000460686 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
FAM228B-201ENST00000460686 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms