RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
SMNDC1-203ENST00000460483 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
SMNDC1-203ENST00000460483 FAM135BQ49AJ0 1406 aa15.48■□□□□ 0.07
SMNDC1-203ENST00000460483 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
SMNDC1-203ENST00000460483 STRCQ7RTU9 1775 aa15.47■□□□□ 0.07
SMNDC1-203ENST00000460483 TECPR2O15040 1411 aa15.47■□□□□ 0.07
SMNDC1-203ENST00000460483 PTCH1Q13635 1447 aa15.47■□□□□ 0.07
SMNDC1-203ENST00000460483 CPS1P31327 1500 aa15.46■□□□□ 0.07
SMNDC1-203ENST00000460483 CENPJQ9HC77 1338 aaPredicted RBP15.45■□□□□ 0.06
SMNDC1-203ENST00000460483 ZBTB22O15209 634 aa15.45■□□□□ 0.06
SMNDC1-203ENST00000460483 PRAM1Q96QH2 718 aa15.45■□□□□ 0.06
SMNDC1-203ENST00000460483 ZNF335Q9H4Z2 1342 aaPredicted RBP15.44■□□□□ 0.06
SMNDC1-203ENST00000460483 NRXN3Q9Y4C0 1643 aa15.44■□□□□ 0.06
SMNDC1-203ENST00000460483 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
SMNDC1-203ENST00000460483 ADGRB1O14514 1584 aa15.44■□□□□ 0.06
SMNDC1-203ENST00000460483 DLC1Q96QB1 1528 aa15.43■□□□□ 0.06
SMNDC1-203ENST00000460483 USP47Q96K76 1375 aa15.43■□□□□ 0.06
SMNDC1-203ENST00000460483 TRPM1Q7Z4N2 1603 aa15.43■□□□□ 0.06
SMNDC1-203ENST00000460483 C19orf44Q9H6X5 657 aa15.42■□□□□ 0.06
SMNDC1-203ENST00000460483 MSH6P52701 1360 aa15.41■□□□□ 0.06
SMNDC1-203ENST00000460483 ATF3P18847 181 aa15.41■□□□□ 0.06
SMNDC1-203ENST00000460483 PTPRUQ92729 1446 aa15.41■□□□□ 0.06
SMNDC1-203ENST00000460483 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
SMNDC1-203ENST00000460483 ROBO2Q9HCK4 1378 aa15.4■□□□□ 0.06
SMNDC1-203ENST00000460483 CADPS2Q86UW7 1296 aa15.4■□□□□ 0.06
SMNDC1-203ENST00000460483 TMEM94Q12767 1356 aa15.39■□□□□ 0.05
SMNDC1-203ENST00000460483 TMF1P82094 1093 aa15.39■□□□□ 0.05
SMNDC1-203ENST00000460483 EVC2Q86UK5 1308 aa15.39■□□□□ 0.05
SMNDC1-203ENST00000460483 SBNO2Q9Y2G9 1366 aa15.38■□□□□ 0.05
SMNDC1-203ENST00000460483 ST20-MTHFSA0A0A6YYL1 179 aa15.38■□□□□ 0.05
SMNDC1-203ENST00000460483 WAPLQ7Z5K2 1190 aa15.38■□□□□ 0.05
SMNDC1-203ENST00000460483 AKT1S1Q96B36 256 aa15.37■□□□□ 0.05
SMNDC1-203ENST00000460483 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
SMNDC1-203ENST00000460483 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMNDC1-203ENST00000460483 PUS7Q96PZ0 661 aaKnown RBP15.36■□□□□ 0.05
SMNDC1-203ENST00000460483 DCCP43146 1447 aa15.35■□□□□ 0.05
SMNDC1-203ENST00000460483 SETD1AO15047 1707 aaKnown RBP15.35■□□□□ 0.05
SMNDC1-203ENST00000460483 TOM1O60784 492 aa15.35■□□□□ 0.05
SMNDC1-203ENST00000460483 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
SMNDC1-203ENST00000460483 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 IQSEC2Q5JU85 1478 aa15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 MINK1Q8N4C8 1332 aaPredicted RBP15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
SMNDC1-203ENST00000460483 WASLO00401 505 aaPredicted RBP15.33■□□□□ 0.04
SMNDC1-203ENST00000460483 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
SMNDC1-203ENST00000460483 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
SMNDC1-203ENST00000460483 ATAD2Q6PL18 1390 aa15.3■□□□□ 0.04
SMNDC1-203ENST00000460483 LTBP4Q8N2S1 1624 aa15.3■□□□□ 0.04
SMNDC1-203ENST00000460483 HIRIP3Q9BW71 556 aaPredicted RBP15.3■□□□□ 0.04
SMNDC1-203ENST00000460483 CDK19Q9BWU1 502 aa15.3■□□□□ 0.04
SMNDC1-203ENST00000460483 RBM33Q96EV2 1170 aaKnown RBP15.29■□□□□ 0.04
SMNDC1-203ENST00000460483 TESK2Q96S53 571 aa15.29■□□□□ 0.04
SMNDC1-203ENST00000460483 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
SMNDC1-203ENST00000460483 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.04
SMNDC1-203ENST00000460483 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.04
SMNDC1-203ENST00000460483 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
SMNDC1-203ENST00000460483 SLAIN2Q9P270 581 aa15.27■□□□□ 0.04
SMNDC1-203ENST00000460483 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
SMNDC1-203ENST00000460483 NUDT16Q96DE0 195 aaKnown RBP15.25■□□□□ 0.03
SMNDC1-203ENST00000460483 ARHGEF28Q8N1W1 1705 aaKnown RBP15.25■□□□□ 0.03
SMNDC1-203ENST00000460483 ADGRB2O60241 1585 aa15.24■□□□□ 0.03
SMNDC1-203ENST00000460483 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
SMNDC1-203ENST00000460483 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
SMNDC1-203ENST00000460483 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
SMNDC1-203ENST00000460483 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
SMNDC1-203ENST00000460483 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
SMNDC1-203ENST00000460483 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
SMNDC1-203ENST00000460483 HDGFL2Q7Z4V5 671 aaPredicted RBP15.22■□□□□ 0.03
SMNDC1-203ENST00000460483 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
SMNDC1-203ENST00000460483 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
SMNDC1-203ENST00000460483 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
SMNDC1-203ENST00000460483 PHF8Q9UPP1 1060 aa15.21■□□□□ 0.03
SMNDC1-203ENST00000460483 TULP4Q9NRJ4 1543 aa15.21■□□□□ 0.03
SMNDC1-203ENST00000460483 QRICH2Q9H0J4 1663 aa15.2■□□□□ 0.02
SMNDC1-203ENST00000460483 NUTM2FA1L443 756 aa15.2■□□□□ 0.02
SMNDC1-203ENST00000460483 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
SMNDC1-203ENST00000460483 PSME1Q06323 249 aa15.2■□□□□ 0.02
SMNDC1-203ENST00000460483 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
SMNDC1-203ENST00000460483 PLEKHG3A1L390 1219 aa15.19■□□□□ 0.02
SMNDC1-203ENST00000460483 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
SMNDC1-203ENST00000460483 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
SMNDC1-203ENST00000460483 MST1RQ04912 1400 aa15.18■□□□□ 0.02
SMNDC1-203ENST00000460483 CABP1Q9NZU7 370 aa15.18■□□□□ 0.02
SMNDC1-203ENST00000460483 BRD4O60885 1362 aaPredicted RBP15.18■□□□□ 0.02
SMNDC1-203ENST00000460483 DISP3Q9P2K9 1392 aa15.18■□□□□ 0.02
SMNDC1-203ENST00000460483 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
SMNDC1-203ENST00000460483 PPIP5K1Q6PFW1 1433 aa15.17■□□□□ 0.02
SMNDC1-203ENST00000460483 KIF7Q2M1P5 1343 aa15.16■□□□□ 0.02
SMNDC1-203ENST00000460483 NALCNQ8IZF0 1738 aa15.15■□□□□ 0.02
SMNDC1-203ENST00000460483 CCDC7Q96M83 1385 aa15.15■□□□□ 0.02
SMNDC1-203ENST00000460483 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
SMNDC1-203ENST00000460483 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
SMNDC1-203ENST00000460483 ATP7BP35670 1465 aa15.14■□□□□ 0.01
SMNDC1-203ENST00000460483 ORAI2Q96SN7 254 aa15.14■□□□□ 0.01
SMNDC1-203ENST00000460483 PRR36Q9H6K5 1346 aa15.14■□□□□ 0.01
SMNDC1-203ENST00000460483 FOXO3O43524 673 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms