RNA–Protein interactions for RNA: ENST00000460471.1

LINC01393-203, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 5

Gene LINC01393, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-203ENST00000460471 GMPR2Q9P2T1 348 aaKnown RBP10.61□□□□□ -0.71
LINC01393-203ENST00000460471 TREML4Q6UXN2 200 aa10.6□□□□□ -0.71
LINC01393-203ENST00000460471 HLA-CQ95604 372 aa10.6□□□□□ -0.71
LINC01393-203ENST00000460471 AXIN1O15169 862 aa10.59□□□□□ -0.71
LINC01393-203ENST00000460471 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
LINC01393-203ENST00000460471 TRIM32Q13049 653 aa10.59□□□□□ -0.71
LINC01393-203ENST00000460471 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
LINC01393-203ENST00000460471 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
LINC01393-203ENST00000460471 WNT7AO00755 349 aa10.58□□□□□ -0.72
LINC01393-203ENST00000460471 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
LINC01393-203ENST00000460471 ZBTB24O43167 697 aaPredicted RBP10.57□□□□□ -0.72
LINC01393-203ENST00000460471 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
LINC01393-203ENST00000460471 SMPD1P17405 629 aa10.57□□□□□ -0.72
LINC01393-203ENST00000460471 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
LINC01393-203ENST00000460471 Q3C1V9 767 aa10.56□□□□□ -0.72
LINC01393-203ENST00000460471 TTC24A2A3L6 582 aaPredicted RBP10.55□□□□□ -0.72
LINC01393-203ENST00000460471 KDM4AO75164 1064 aa10.55□□□□□ -0.72
LINC01393-203ENST00000460471 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
LINC01393-203ENST00000460471 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
LINC01393-203ENST00000460471 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
LINC01393-203ENST00000460471 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
LINC01393-203ENST00000460471 C11orf95C9JLR9 678 aaPredicted RBP10.52□□□□□ -0.73
LINC01393-203ENST00000460471 J3QL48 77 aa10.52□□□□□ -0.73
LINC01393-203ENST00000460471 IRF6O14896 467 aa10.52□□□□□ -0.73
LINC01393-203ENST00000460471 HOXA2O43364 376 aa10.52□□□□□ -0.73
LINC01393-203ENST00000460471 SKOR1P84550 965 aa10.51□□□□□ -0.73
LINC01393-203ENST00000460471 GUCA2AQ02747 115 aa10.51□□□□□ -0.73
LINC01393-203ENST00000460471 NFX1Q12986 1120 aaKnown RBP10.51□□□□□ -0.73
LINC01393-203ENST00000460471 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
LINC01393-203ENST00000460471 USP46P62068 366 aa10.49□□□□□ -0.73
LINC01393-203ENST00000460471 LCE2CQ5TA81 110 aa10.49□□□□□ -0.73
LINC01393-203ENST00000460471 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
LINC01393-203ENST00000460471 ATP13A2Q9NQ11 1180 aa10.49□□□□□ -0.73
LINC01393-203ENST00000460471 WFS1O76024 890 aa10.48□□□□□ -0.73
LINC01393-203ENST00000460471 HPS1Q92902 700 aa10.48□□□□□ -0.73
LINC01393-203ENST00000460471 SNRPBP14678 240 aaKnown RBP10.46□□□□□ -0.73
LINC01393-203ENST00000460471 CCDC24Q8N4L8 307 aa10.46□□□□□ -0.73
LINC01393-203ENST00000460471 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
LINC01393-203ENST00000460471 MINK1Q8N4C8 1332 aaPredicted RBP10.46□□□□□ -0.73
LINC01393-203ENST00000460471 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
LINC01393-203ENST00000460471 FAM217BQ9NTX9 383 aaPredicted RBP10.45□□□□□ -0.74
LINC01393-203ENST00000460471 JUNDP17535 347 aa10.44□□□□□ -0.74
LINC01393-203ENST00000460471 RC3H1Q5TC82 1133 aaKnown RBP10.44□□□□□ -0.74
LINC01393-203ENST00000460471 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
LINC01393-203ENST00000460471 WNT7BP56706 349 aa10.43□□□□□ -0.74
LINC01393-203ENST00000460471 GPCPD1Q9NPB8 672 aa10.43□□□□□ -0.74
LINC01393-203ENST00000460471 WIPF1O43516 503 aa10.41□□□□□ -0.74
LINC01393-203ENST00000460471 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
LINC01393-203ENST00000460471 CLCN1P35523 988 aa10.39□□□□□ -0.75
LINC01393-203ENST00000460471 RETREG3Q86VR2 466 aa10.39□□□□□ -0.75
LINC01393-203ENST00000460471 PCDHGC3Q9UN70 934 aa10.39□□□□□ -0.75
LINC01393-203ENST00000460471 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
LINC01393-203ENST00000460471 NUDT12Q9BQG2 462 aa10.38□□□□□ -0.75
LINC01393-203ENST00000460471 SIAH2O43255 324 aa10.37□□□□□ -0.75
LINC01393-203ENST00000460471 SENP2Q9HC62 589 aa10.37□□□□□ -0.75
LINC01393-203ENST00000460471 TERTO14746 1132 aaKnown RBP10.36□□□□□ -0.75
LINC01393-203ENST00000460471 ALDH1A1P00352 501 aa10.35□□□□□ -0.75
LINC01393-203ENST00000460471 TULP1O00294 542 aaPredicted RBP10.34□□□□□ -0.75
LINC01393-203ENST00000460471 FDX1P10109 184 aa10.34□□□□□ -0.75
LINC01393-203ENST00000460471 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
LINC01393-203ENST00000460471 EHBP1Q8NDI1 1231 aa10.33□□□□□ -0.76
LINC01393-203ENST00000460471 KIFC2Q96AC6 838 aa10.33□□□□□ -0.76
LINC01393-203ENST00000460471 UNC13AQ9UPW8 1703 aa10.33□□□□□ -0.76
LINC01393-203ENST00000460471 BMP1P13497 986 aa10.32□□□□□ -0.76
LINC01393-203ENST00000460471 SH3BP2P78314 561 aa10.32□□□□□ -0.76
LINC01393-203ENST00000460471 TRIM46Q7Z4K8 759 aa10.32□□□□□ -0.76
LINC01393-203ENST00000460471 CCNYL3P0C7X3 344 aa10.31□□□□□ -0.76
LINC01393-203ENST00000460471 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
LINC01393-203ENST00000460471 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
LINC01393-203ENST00000460471 C6orf229H3BNL8 230 aa10.3□□□□□ -0.76
LINC01393-203ENST00000460471 MS4A1P11836 297 aa10.29□□□□□ -0.76
LINC01393-203ENST00000460471 NDUFV2P19404 249 aa10.29□□□□□ -0.76
LINC01393-203ENST00000460471 INSM1Q01101 510 aaPredicted RBP10.29□□□□□ -0.76
LINC01393-203ENST00000460471 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
LINC01393-203ENST00000460471 BICRAQ9NZM4 1560 aa10.28□□□□□ -0.76
LINC01393-203ENST00000460471 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
LINC01393-203ENST00000460471 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
LINC01393-203ENST00000460471 PTPRNQ16849 979 aa10.28□□□□□ -0.76
LINC01393-203ENST00000460471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC01393-203ENST00000460471 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
LINC01393-203ENST00000460471 UNC93B1Q9H1C4 597 aa10.28□□□□□ -0.76
LINC01393-203ENST00000460471 LINC01559Q495D7 138 aa10.26□□□□□ -0.77
LINC01393-203ENST00000460471 CAPN5O15484 640 aaPredicted RBP10.25□□□□□ -0.77
LINC01393-203ENST00000460471 KRI1Q8N9T8 703 aaKnown RBP10.25□□□□□ -0.77
LINC01393-203ENST00000460471 EVA1BQ9NVM1 165 aa10.25□□□□□ -0.77
LINC01393-203ENST00000460471 WASF2Q9Y6W5 498 aa10.25□□□□□ -0.77
LINC01393-203ENST00000460471 PRR7Q8TB68 274 aa10.24□□□□□ -0.77
LINC01393-203ENST00000460471 AMHR2Q16671 573 aa10.23□□□□□ -0.77
LINC01393-203ENST00000460471 BAP1Q92560 729 aa10.23□□□□□ -0.77
LINC01393-203ENST00000460471 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
LINC01393-203ENST00000460471 NACADO15069 1562 aa10.22□□□□□ -0.77
LINC01393-203ENST00000460471 KCNH2Q12809 1159 aa10.22□□□□□ -0.77
LINC01393-203ENST00000460471 GIGYF2Q6Y7W6 1299 aaKnown RBP10.22□□□□□ -0.77
LINC01393-203ENST00000460471 ZNF511Q8NB15 262 aa10.22□□□□□ -0.77
LINC01393-203ENST00000460471 LORP23490 312 aaPredicted RBP10.21□□□□□ -0.77
LINC01393-203ENST00000460471 MTMR2Q13614 643 aa10.21□□□□□ -0.77
LINC01393-203ENST00000460471 TTLL12Q14166 644 aaPredicted RBP10.21□□□□□ -0.77
LINC01393-203ENST00000460471 BARGINQ6ZT62 677 aa10.21□□□□□ -0.77
LINC01393-203ENST00000460471 DESI1Q6ICB0 168 aa10.2□□□□□ -0.78
LINC01393-203ENST00000460471 ZMYND10O75800 440 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms