RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 RALYLQ86SE5 291 aaKnown RBP10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 PRDM2Q13029 1718 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 FBXW7Q969H0 707 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 CAGE1Q8TC20 777 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 PSMA5P28066 241 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 ZNF592Q92610 1267 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 ANKRD45Q5TZF3 282 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 LUC7LQ9NQ29 371 aaKnown RBP10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 SMARCE1Q969G3 411 aa10.69□□□□□ -0.7
SHROOM4-203ENST00000460112 INTS3Q68E01 1043 aaKnown RBP10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 LTV1Q96GA3 475 aaPredicted RBP10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 DESP17661 470 aa10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 TRIM21P19474 475 aaKnown RBP10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 TXLNAP40222 546 aa10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 SYCP1Q15431 976 aa10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 SOGA1O94964 1423 aa10.68□□□□□ -0.7
SHROOM4-203ENST00000460112 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 CHMP5Q9NZZ3 219 aa10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 DNAI2Q9GZS0 605 aa10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 FAM43AQ8N2R8 423 aa10.67□□□□□ -0.7
SHROOM4-203ENST00000460112 HIP1O00291 1037 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 MYOM3Q5VTT5 1437 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 GOLGA6L7A0A1B0GV03 622 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 CCDC7Q96M83 1385 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
SHROOM4-203ENST00000460112 MBD3O95983 291 aa10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 PAF1Q8N7H5 531 aa10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 FOXD4L4Q8WXT5 416 aaPredicted RBP10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 RRP9O43818 475 aaKnown RBP10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 RABEP1Q15276 862 aa10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 CCAR1Q8IX12 1150 aaKnown RBP10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 FYCO1Q9BQS8 1478 aa10.65□□□□□ -0.7
SHROOM4-203ENST00000460112 CT47B1P0C2W7 299 aaPredicted RBP10.65□□□□□ -0.71
SHROOM4-203ENST00000460112 EZRP15311 586 aaKnown RBP10.65□□□□□ -0.71
SHROOM4-203ENST00000460112 GOLGA6L10A6NI86 522 aa10.65□□□□□ -0.71
SHROOM4-203ENST00000460112 CCDC39Q9UFE4 941 aa10.65□□□□□ -0.71
SHROOM4-203ENST00000460112 PDCP20941 246 aa10.64□□□□□ -0.71
SHROOM4-203ENST00000460112 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
SHROOM4-203ENST00000460112 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
SHROOM4-203ENST00000460112 IQCEQ6IPM2 695 aa10.64□□□□□ -0.71
SHROOM4-203ENST00000460112 H0YHG0 523 aa10.63□□□□□ -0.71
SHROOM4-203ENST00000460112 MRE11P49959 708 aa10.63□□□□□ -0.71
SHROOM4-203ENST00000460112 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
SHROOM4-203ENST00000460112 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
SHROOM4-203ENST00000460112 GNL3LQ9NVN8 582 aaKnown RBP10.63□□□□□ -0.71
SHROOM4-203ENST00000460112 PSME1Q06323 249 aa10.62□□□□□ -0.71
SHROOM4-203ENST00000460112 CECR2Q9BXF3 1484 aa10.62□□□□□ -0.71
SHROOM4-203ENST00000460112 INCENPQ9NQS7 918 aa10.62□□□□□ -0.71
SHROOM4-203ENST00000460112 GNAI1P63096 354 aa10.62□□□□□ -0.71
SHROOM4-203ENST00000460112 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 STIM1Q13586 685 aa10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 JMYQ8N9B5 988 aa10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 DIAPH1O60610 1272 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 ZNF396Q96N95 335 aaPredicted RBP10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 ZNHIT6Q9NWK9 470 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 SEPT7Q16181 437 aaKnown RBP10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 CNTROBQ8N137 903 aa10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 USP47Q96K76 1375 aa10.61□□□□□ -0.71
SHROOM4-203ENST00000460112 KIF6Q6ZMV9 814 aa10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 VPS37CA5D8V6 355 aaPredicted RBP10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 RRP1P56182 461 aaKnown RBP10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 IKQ13123 557 aaPredicted RBP10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 HECW1Q76N89 1606 aa10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 DHX57Q6P158 1386 aaKnown RBP10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 RAPGEF4Q8WZA2 1011 aa10.6□□□□□ -0.71
SHROOM4-203ENST00000460112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 CUL7Q14999 1698 aa10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 GBP2P32456 591 aaPredicted RBP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 ATF3P18847 181 aa10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 PDE4AP27815 886 aa10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 FKBP5Q13451 457 aaPredicted RBP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 KRT18P05783 430 aaKnown RBP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 EIF2S2P20042 333 aaKnown RBP10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 ZNF428Q96B54 188 aa10.59□□□□□ -0.71
SHROOM4-203ENST00000460112 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
SHROOM4-203ENST00000460112 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
SHROOM4-203ENST00000460112 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
SHROOM4-203ENST00000460112 CCDC27Q2M243 656 aa10.58□□□□□ -0.72
SHROOM4-203ENST00000460112 CDC45O75419 566 aa10.57□□□□□ -0.72
SHROOM4-203ENST00000460112 NEFHP12036 1026 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms