RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PTCH1Q13635 1447 aa21.39■■□□□ 1.01
CMTM3-203ENST00000460097 SIRT1Q96EB6 747 aa21.38■■□□□ 1.01
CMTM3-203ENST00000460097 TRAK1Q9UPV9 953 aa21.38■■□□□ 1.01
CMTM3-203ENST00000460097 KIAA1210Q9ULL0 1709 aa21.38■■□□□ 1.01
CMTM3-203ENST00000460097 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
CMTM3-203ENST00000460097 TECPR2O15040 1411 aa21.38■■□□□ 1.01
CMTM3-203ENST00000460097 ERICH6Q7L0X2 663 aa21.37■■□□□ 1.01
CMTM3-203ENST00000460097 WAPLQ7Z5K2 1190 aa21.36■■□□□ 1.01
CMTM3-203ENST00000460097 C19orf44Q9H6X5 657 aa21.36■■□□□ 1.01
CMTM3-203ENST00000460097 XIRP1Q702N8 1843 aaKnown RBP21.35■■□□□ 1.01
CMTM3-203ENST00000460097 MSH6P52701 1360 aa21.35■■□□□ 1.01
CMTM3-203ENST00000460097 UBAP1LF5GYI3 381 aa21.34■■□□□ 1.01
CMTM3-203ENST00000460097 TOM1O60784 492 aa21.34■■□□□ 1.01
CMTM3-203ENST00000460097 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
CMTM3-203ENST00000460097 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
CMTM3-203ENST00000460097 PRAM1Q96QH2 718 aa21.33■■□□□ 1
CMTM3-203ENST00000460097 POGKQ9P215 609 aa21.33■■□□□ 1
CMTM3-203ENST00000460097 FAM135BQ49AJ0 1406 aa21.32■■□□□ 1
CMTM3-203ENST00000460097 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
CMTM3-203ENST00000460097 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
CMTM3-203ENST00000460097 WASHC2AQ641Q2 1341 aa21.3■■□□□ 1
CMTM3-203ENST00000460097 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
CMTM3-203ENST00000460097 DLC1Q96QB1 1528 aa21.3■■□□□ 1
CMTM3-203ENST00000460097 PLEKHH1Q9ULM0 1364 aa21.3■■□□□ 1
CMTM3-203ENST00000460097 ATF3P18847 181 aa21.3■■□□□ 1
CMTM3-203ENST00000460097 FBXO41Q8TF61 875 aa21.3■■□□□ 1
CMTM3-203ENST00000460097 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
CMTM3-203ENST00000460097 CADPS2Q86UW7 1296 aa21.29■■□□□ 1
CMTM3-203ENST00000460097 CARD11Q9BXL7 1154 aa21.29■■□□□ 1
CMTM3-203ENST00000460097 ADGRL3Q9HAR2 1447 aa21.28■■□□□ 1
CMTM3-203ENST00000460097 GPRASP1Q5JY77 1395 aa21.27■■□□□ 1
CMTM3-203ENST00000460097 RALGAPBQ86X10 1494 aa21.27■■□□□ 1
CMTM3-203ENST00000460097 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
CMTM3-203ENST00000460097 PIP4K2BP78356 416 aa21.25■□□□□ 0.99
CMTM3-203ENST00000460097 SLAIN2Q9P270 581 aa21.25■□□□□ 0.99
CMTM3-203ENST00000460097 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.25■□□□□ 0.99
CMTM3-203ENST00000460097 DCCP43146 1447 aa21.24■□□□□ 0.99
CMTM3-203ENST00000460097 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
CMTM3-203ENST00000460097 NALCNQ8IZF0 1738 aa21.22■□□□□ 0.99
CMTM3-203ENST00000460097 MINK1Q8N4C8 1332 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-203ENST00000460097 CENPJQ9HC77 1338 aaPredicted RBP21.21■□□□□ 0.99
CMTM3-203ENST00000460097 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
CMTM3-203ENST00000460097 EIF3AQ14152 1382 aaKnown RBP21.19■□□□□ 0.98
CMTM3-203ENST00000460097 PRKRIP1Q9H875 184 aaPredicted RBP21.19■□□□□ 0.98
CMTM3-203ENST00000460097 CCDC7Q96M83 1385 aa21.19■□□□□ 0.98
CMTM3-203ENST00000460097 SMG6Q86US8 1419 aaKnown RBP21.16■□□□□ 0.98
CMTM3-203ENST00000460097 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
CMTM3-203ENST00000460097 MST1RQ04912 1400 aa21.15■□□□□ 0.98
CMTM3-203ENST00000460097 RNF123Q5XPI4 1314 aa21.15■□□□□ 0.98
CMTM3-203ENST00000460097 NUTM2FA1L443 756 aa21.15■□□□□ 0.98
CMTM3-203ENST00000460097 WASLO00401 505 aaPredicted RBP21.15■□□□□ 0.98
CMTM3-203ENST00000460097 ILDR1Q86SU0 546 aaPredicted RBP21.14■□□□□ 0.97
CMTM3-203ENST00000460097 NOP58Q9Y2X3 529 aaKnown RBP21.13■□□□□ 0.97
CMTM3-203ENST00000460097 C1orf167Q5SNV9 1468 aa21.12■□□□□ 0.97
CMTM3-203ENST00000460097 ADGRB2O60241 1585 aa21.11■□□□□ 0.97
CMTM3-203ENST00000460097 ST20-MTHFSA0A0A6YYL1 179 aa21.11■□□□□ 0.97
CMTM3-203ENST00000460097 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
CMTM3-203ENST00000460097 BRINP3Q76B58 766 aa21.11■□□□□ 0.97
CMTM3-203ENST00000460097 CDK19Q9BWU1 502 aa21.11■□□□□ 0.97
CMTM3-203ENST00000460097 DEKP35659 375 aaKnown RBP21.1■□□□□ 0.97
CMTM3-203ENST00000460097 ESCO1Q5FWF5 840 aa21.1■□□□□ 0.97
CMTM3-203ENST00000460097 USP47Q96K76 1375 aa21.1■□□□□ 0.97
CMTM3-203ENST00000460097 ORAI2Q96SN7 254 aa21.1■□□□□ 0.97
CMTM3-203ENST00000460097 QRICH2Q9H0J4 1663 aa21.08■□□□□ 0.97
CMTM3-203ENST00000460097 EVC2Q86UK5 1308 aa21.07■□□□□ 0.96
CMTM3-203ENST00000460097 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
CMTM3-203ENST00000460097 FMN2Q9NZ56 1722 aa21.07■□□□□ 0.96
CMTM3-203ENST00000460097 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
CMTM3-203ENST00000460097 SRPK2P78362 688 aaKnown RBP21.06■□□□□ 0.96
CMTM3-203ENST00000460097 MRS2Q9HD23 443 aa21.06■□□□□ 0.96
CMTM3-203ENST00000460097 ANKARQ7Z5J8 1434 aa21.05■□□□□ 0.96
CMTM3-203ENST00000460097 SBNO2Q9Y2G9 1366 aa21.05■□□□□ 0.96
CMTM3-203ENST00000460097 HSPA1LP34931 641 aa21.05■□□□□ 0.96
CMTM3-203ENST00000460097 NUDT16Q96DE0 195 aaKnown RBP21.05■□□□□ 0.96
CMTM3-203ENST00000460097 TESK2Q96S53 571 aa21.04■□□□□ 0.96
CMTM3-203ENST00000460097 CABP2Q9NPB3 220 aa21.04■□□□□ 0.96
CMTM3-203ENST00000460097 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
CMTM3-203ENST00000460097 CCDC184Q52MB2 194 aa21.03■□□□□ 0.96
CMTM3-203ENST00000460097 TULP4Q9NRJ4 1543 aa21.03■□□□□ 0.96
CMTM3-203ENST00000460097 B4GALNT3Q6L9W6 998 aa21.02■□□□□ 0.96
CMTM3-203ENST00000460097 PHF8Q9UPP1 1060 aa21.02■□□□□ 0.96
CMTM3-203ENST00000460097 CCDC61Q9Y6R9 512 aa21.02■□□□□ 0.96
CMTM3-203ENST00000460097 FOXO3O43524 673 aa21■□□□□ 0.95
CMTM3-203ENST00000460097 DDX17Q92841 729 aaKnown RBP21■□□□□ 0.95
CMTM3-203ENST00000460097 PMFBP1Q8TBY8 1022 aa21■□□□□ 0.95
CMTM3-203ENST00000460097 NUDCQ9Y266 331 aa21■□□□□ 0.95
CMTM3-203ENST00000460097 RGPD8O14715 1765 aaPredicted RBP20.99■□□□□ 0.95
CMTM3-203ENST00000460097 USP32Q8NFA0 1604 aa20.99■□□□□ 0.95
CMTM3-203ENST00000460097 C11orf95C9JLR9 678 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-203ENST00000460097 NPHP3Q7Z494 1330 aa20.98■□□□□ 0.95
CMTM3-203ENST00000460097 TMF1P82094 1093 aa20.97■□□□□ 0.95
CMTM3-203ENST00000460097 IPO9Q96P70 1041 aaKnown RBP20.97■□□□□ 0.95
CMTM3-203ENST00000460097 ATP7BP35670 1465 aa20.97■□□□□ 0.95
CMTM3-203ENST00000460097 KIF7Q2M1P5 1343 aa20.96■□□□□ 0.95
CMTM3-203ENST00000460097 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
CMTM3-203ENST00000460097 AHDC1Q5TGY3 1603 aaPredicted RBP20.95■□□□□ 0.95
CMTM3-203ENST00000460097 ANP32AP39687 249 aaKnown RBP20.95■□□□□ 0.94
CMTM3-203ENST00000460097 NGDNQ8NEJ9 315 aaKnown RBP20.95■□□□□ 0.94
CMTM3-203ENST00000460097 PUS7Q96PZ0 661 aaKnown RBP20.95■□□□□ 0.94
CMTM3-203ENST00000460097 PLEKHG3A1L390 1219 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms