RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	ZFYVE9	O95405	1425 aa		13.25	□□□□□ -0.29
NCSTN-209	ENST00000459963	PIK3R4	Q99570	1358 aa		13.25	□□□□□ -0.29
NCSTN-209	ENST00000459963	SOS2	Q07890	1332 aa	Predicted RBP	13.25	□□□□□ -0.29
NCSTN-209	ENST00000459963	UNC5CL	Q8IV45	518 aa		13.25	□□□□□ -0.29
NCSTN-209	ENST00000459963	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.24	□□□□□ -0.29
NCSTN-209	ENST00000459963	UTRN	P46939	3433 aa		13.24	□□□□□ -0.29
NCSTN-209	ENST00000459963	MYOM2	P54296	1465 aa		13.23	□□□□□ -0.29
NCSTN-209	ENST00000459963	HDGF	P51858	240 aa	Known RBP	13.23	□□□□□ -0.29
NCSTN-209	ENST00000459963	AKT1S1	Q96B36	256 aa		13.23	□□□□□ -0.29
NCSTN-209	ENST00000459963	AMOTL2	Q9Y2J4	779 aa		13.23	□□□□□ -0.29
NCSTN-209	ENST00000459963	ADAMTS13	Q76LX8	1427 aa		13.22	□□□□□ -0.29
NCSTN-209	ENST00000459963	LAMC1	P11047	1609 aa		13.22	□□□□□ -0.29
NCSTN-209	ENST00000459963	GIGYF1	O75420	1035 aa	Predicted RBP	13.22	□□□□□ -0.29
NCSTN-209	ENST00000459963	DISP2	A7MBM2	1401 aa		13.22	□□□□□ -0.29
NCSTN-209	ENST00000459963	SLC34A2	O95436	690 aa		13.21	□□□□□ -0.29
NCSTN-209	ENST00000459963	TRPM2	O94759	1503 aa		13.21	□□□□□ -0.29
NCSTN-209	ENST00000459963	EHBP1L1	Q8N3D4	1523 aa		13.21	□□□□□ -0.29
NCSTN-209	ENST00000459963	MARF1	Q9Y4F3	1742 aa	Known RBP	13.21	□□□□□ -0.3
NCSTN-209	ENST00000459963	RIMS2	Q9UQ26	1411 aa		13.21	□□□□□ -0.3
NCSTN-209	ENST00000459963	ONECUT3	O60422	494 aa	Predicted RBP	13.2	□□□□□ -0.3
NCSTN-209	ENST00000459963	EZH2	Q15910	746 aa	Known RBP	13.2	□□□□□ -0.3
NCSTN-209	ENST00000459963	SPON1	Q9HCB6	807 aa		13.2	□□□□□ -0.3
NCSTN-209	ENST00000459963	ARHGEF5	Q12774	1597 aa		13.2	□□□□□ -0.3
NCSTN-209	ENST00000459963	SLIT2	O94813	1529 aa		13.19	□□□□□ -0.3
NCSTN-209	ENST00000459963	SLC52A1	Q9NWF4	448 aa		13.19	□□□□□ -0.3
NCSTN-209	ENST00000459963	PTPRU	Q92729	1446 aa		13.19	□□□□□ -0.3
NCSTN-209	ENST00000459963	RGPD1	P0DJD0	1748 aa		13.19	□□□□□ -0.3
NCSTN-209	ENST00000459963	KCNQ2	O43526	872 aa		13.17	□□□□□ -0.3
NCSTN-209	ENST00000459963	C1orf167	Q5SNV9	1468 aa		13.16	□□□□□ -0.3
NCSTN-209	ENST00000459963	RPRD2	Q5VT52	1461 aa	Known RBP	13.16	□□□□□ -0.3
NCSTN-209	ENST00000459963	NOS1	P29475	1434 aa		13.16	□□□□□ -0.3
NCSTN-209	ENST00000459963	POTEH	Q6S545	545 aa		13.16	□□□□□ -0.3
NCSTN-209	ENST00000459963	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
NCSTN-209	ENST00000459963	CAMKK2	Q96RR4	588 aa		13.15	□□□□□ -0.3
NCSTN-209	ENST00000459963	ADGRL3	Q9HAR2	1447 aa		13.14	□□□□□ -0.31
NCSTN-209	ENST00000459963	SPDYE2B	A6NHP3	402 aa		13.14	□□□□□ -0.31
NCSTN-209	ENST00000459963	SPDYE6	P0CI01	402 aa		13.14	□□□□□ -0.31
NCSTN-209	ENST00000459963	VPS72	Q15906	364 aa		13.14	□□□□□ -0.31
NCSTN-209	ENST00000459963	SPDYE2	Q495Y8	402 aa		13.14	□□□□□ -0.31
NCSTN-209	ENST00000459963	ORAI2	Q96SN7	254 aa		13.13	□□□□□ -0.31
NCSTN-209	ENST00000459963	DUOX2	Q9NRD8	1548 aa		13.13	□□□□□ -0.31
NCSTN-209	ENST00000459963	CEP162	Q5TB80	1403 aa		13.13	□□□□□ -0.31
NCSTN-209	ENST00000459963	CHD4	Q14839	1912 aa		13.12	□□□□□ -0.31
NCSTN-209	ENST00000459963	MKRN4P	Q13434	485 aa	Predicted RBP	13.12	□□□□□ -0.31
NCSTN-209	ENST00000459963	TNS1	Q9HBL0	1735 aa	Known RBP	13.12	□□□□□ -0.31
NCSTN-209	ENST00000459963	XRN1	Q8IZH2	1706 aa	Known RBP	13.11	□□□□□ -0.31
NCSTN-209	ENST00000459963	KANK1	Q14678	1352 aa		13.11	□□□□□ -0.31
NCSTN-209	ENST00000459963		A0A0G2JS52	829 aa		13.11	□□□□□ -0.31
NCSTN-209	ENST00000459963	MYT1	Q01538	1121 aa		13.11	□□□□□ -0.31
NCSTN-209	ENST00000459963	CCDC9	Q9Y3X0	531 aa	Known RBP	13.11	□□□□□ -0.31
NCSTN-209	ENST00000459963	PARD3	Q8TEW0	1356 aa		13.1	□□□□□ -0.31
NCSTN-209	ENST00000459963	LMTK2	Q8IWU2	1503 aa		13.1	□□□□□ -0.31
NCSTN-209	ENST00000459963	NBPF8	Q3BBV2	869 aa		13.1	□□□□□ -0.31
NCSTN-209	ENST00000459963	NBPF14	Q5TI25	921 aa		13.1	□□□□□ -0.31
NCSTN-209	ENST00000459963	MYO5B	Q9ULV0	1848 aa		13.1	□□□□□ -0.31
NCSTN-209	ENST00000459963	ADGRB2	O60241	1585 aa		13.09	□□□□□ -0.31
NCSTN-209	ENST00000459963	CHRDL2	Q6WN34	429 aa		13.09	□□□□□ -0.31
NCSTN-209	ENST00000459963	NALCN	Q8IZF0	1738 aa		13.08	□□□□□ -0.32
NCSTN-209	ENST00000459963	FAM182B	Q5T319	152 aa		13.08	□□□□□ -0.32
NCSTN-209	ENST00000459963	PCDH10	Q9P2E7	1040 aa		13.08	□□□□□ -0.32
NCSTN-209	ENST00000459963	TMEM131L	A2VDJ0	1609 aa		13.08	□□□□□ -0.32
NCSTN-209	ENST00000459963	GCC2	Q8IWJ2	1684 aa		13.08	□□□□□ -0.32
NCSTN-209	ENST00000459963	ERBIN	Q96RT1	1412 aa		13.07	□□□□□ -0.32
NCSTN-209	ENST00000459963	REM2	Q8IYK8	340 aa	Predicted RBP	13.07	□□□□□ -0.32
NCSTN-209	ENST00000459963	NPHP3	Q7Z494	1330 aa		13.06	□□□□□ -0.32
NCSTN-209	ENST00000459963	FAM98C	Q17RN3	349 aa	Known RBP	13.05	□□□□□ -0.32
NCSTN-209	ENST00000459963	PTPN23	Q9H3S7	1636 aa		13.05	□□□□□ -0.32
NCSTN-209	ENST00000459963	RREB1	Q92766	1687 aa		13.05	□□□□□ -0.32
NCSTN-209	ENST00000459963	PXDN	Q92626	1479 aa		13.04	□□□□□ -0.32
NCSTN-209	ENST00000459963	APBA3	O96018	575 aa		13.04	□□□□□ -0.32
NCSTN-209	ENST00000459963	NUP188	Q5SRE5	1749 aa		13.04	□□□□□ -0.32
NCSTN-209	ENST00000459963	NRK	Q7Z2Y5	1582 aa		13.03	□□□□□ -0.32
NCSTN-209	ENST00000459963	USP32	Q8NFA0	1604 aa		13.03	□□□□□ -0.32
NCSTN-209	ENST00000459963	TRIM37	O94972	964 aa		13.03	□□□□□ -0.32
NCSTN-209	ENST00000459963	ZNF692	Q9BU19	519 aa	Predicted RBP	13.03	□□□□□ -0.32
NCSTN-209	ENST00000459963	KIF15	Q9NS87	1388 aa		13.03	□□□□□ -0.32
NCSTN-209	ENST00000459963	CHGA	P10645	457 aa	Known RBP	13.02	□□□□□ -0.33
NCSTN-209	ENST00000459963	HSPA6	P17066	643 aa		13.02	□□□□□ -0.33
NCSTN-209	ENST00000459963	PRELP	P51888	382 aa		13.02	□□□□□ -0.33
NCSTN-209	ENST00000459963	ADGRL2	O95490	1459 aa		13.02	□□□□□ -0.33
NCSTN-209	ENST00000459963	SYT17	Q9BSW7	474 aa		13.01	□□□□□ -0.33
NCSTN-209	ENST00000459963	NWD2	Q9ULI1	1742 aa		13.01	□□□□□ -0.33
NCSTN-209	ENST00000459963	FAM83G	A6ND36	823 aa		13	□□□□□ -0.33
NCSTN-209	ENST00000459963	XPC	Q01831	940 aa	Predicted RBP	13	□□□□□ -0.33
NCSTN-209	ENST00000459963	PLCH1	Q4KWH8	1693 aa		12.99	□□□□□ -0.33
NCSTN-209	ENST00000459963	MET	P08581	1390 aa		12.99	□□□□□ -0.33
NCSTN-209	ENST00000459963	MYOM1	P52179	1685 aa		12.99	□□□□□ -0.33
NCSTN-209	ENST00000459963	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.98	□□□□□ -0.33
NCSTN-209	ENST00000459963	RRP7BP	Q9NSQ0	103 aa		12.98	□□□□□ -0.33
NCSTN-209	ENST00000459963	NRXN3	Q9Y4C0	1643 aa		12.98	□□□□□ -0.33
NCSTN-209	ENST00000459963	FOXO3	O43524	673 aa		12.97	□□□□□ -0.33
NCSTN-209	ENST00000459963	PTGER2	P43116	358 aa		12.97	□□□□□ -0.33
NCSTN-209	ENST00000459963	ESCO1	Q5FWF5	840 aa		12.97	□□□□□ -0.33
NCSTN-209	ENST00000459963	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.97	□□□□□ -0.33
NCSTN-209	ENST00000459963	FAM196A	Q6ZSG2	479 aa		12.97	□□□□□ -0.33
NCSTN-209	ENST00000459963	SHANK3	Q9BYB0	1731 aa		12.96	□□□□□ -0.33
NCSTN-209	ENST00000459963	HAP1	P54257	671 aa	Predicted RBP	12.96	□□□□□ -0.33
NCSTN-209	ENST00000459963	LRPPRC	P42704	1394 aa	Known RBP	12.95	□□□□□ -0.34
NCSTN-209	ENST00000459963	PITPNM1	O00562	1244 aa		12.95	□□□□□ -0.34
NCSTN-209	ENST00000459963	SPATA31A3	Q5VYP0	1347 aa		12.94	□□□□□ -0.34

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